P1 P1' P2 P2' P2.1 P2.1a P2.1a' P2.1b P2.1b' P2.1' P3 P4 P5 P5' P4' P6 P6' P7 P3' P8 P8' P7' P9.0 P9 P9' P9.1 P9.1' P9.2 P9.2' P9.3 P9.3' P9.0'
Eni.S989-1 ACUCACCAGGUUAACGACCUUCGGACAGUUACGACAUGUCUG-GGCCCGG---GACAGUGGGAAAGGG-------ACGU-----------------CCUUUUCCUGAUAGUUCACAACCC-A-UCCAUGUGAGG----AAGU----CCUC--CUUUUCGG-GCA---UGGA---GCAGCGCCCCC----CUUUCUC------GGGGGCCUGU---AGGUUGGUGC-AACACCAGC-UGGUACAGGA-----GACGCCA-----------------CCUCACAAU--------------UGGCCGA-UCCUGUGGUGAGUCGGGAGUAACGUCCUGGCCAUCGCAACGCGCG-CAA-AGCGG-UGGGUAGGGCCCCCUUAG------GAUA------CUAAUGGGGGUCCUGCUUAAGGUACGUGCUAAUCCCAUGGGAUGGUAA----ACCAUGG---CUCAA-GUAUGGGAGGUCCGA-AU-ACUU-AA-CAACUUGGG--GCAGCAUACCUA-------------UCG-------------UAGGUUCUGUGUA------CGCGGGAACU--------------------------------------------ACACCUAAC----------------------------------------GGUUCCCC-G--------GCUUAAAU-GCCAGACACAACGA
.....<<<<<<<..............................->>>>>>>---...<.<<<<<<<<<<-------....----------------->>>>>>>>>>.>.<<.<.<<<<<.-.-<<<<<<<<<<<----....---->>>>--........->>>--->>>>---<<<<.<<<<<<----.......------>>>>>>>>>>---.>>>>>>.>>-..<<<<.<<-<...<<<<<<-----...<<<<-----------------.........-------------->>>>...->>>>>><<<<.<<<<<<<......>>>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<<<<<<<<------....------>>>>.>>>>>>>>>>>>.......]]]]]].<<.<<<<<<........----.>>>>>>---<<<<<-<<.<<..<<<<....-..->>>>-..->>>>>>>>>--<<<<...<<<<<-------------...------------->>>>>.>>>>...------<<.<<<<<<<--------------------------------------------.........---------------------------------------->>>>>>>>->--------......>>-..............
Eni.S989-2 ACUCACCAGGUUAACGACCUUCGGACAGUUACGACAUGUCUG-GGCCCGG---GACAGUGGGAAAGGG-------ACGC-----------------CCUUUUCCUGCUAGUACACAACCG-A-UCCAUGUGAGG----AAGU----CCUC--CUUUUCGG-GCA---UGGA---GCAGCGCCCCC----CUUUCUC------GGGGGCCUGU---AGGUUGGUGC-AACACCAGC-UGGUACAGGA-----GACGCCA-----------------CCUCACAAU--------------UGGCCGA-UCCUGUGGUGAGUCGGGAGUAACGUCCUGGCCAUCGCAACGCGCG-CAA-AGCGG-UGGGUAGGGCCCCCUUAG------GAUA------CUAAUGGGGGUCCUGCUUAAGGUACGUGCUAAUCCCAUGGGAUGGUAA----ACCAUGG---CUCAAAGUAUGGGAGGUCCGA-AU-ACUU-AA-CAACUUGGG--GCAGCAUACCUA-------------UCG-------------UAGGUGCUGUGUA------CGCGGGAACU--------------------------------------------ACACCUAAC----------------------------------------GGUUCCCCCG--------GCUUAAAU-GCCAGACACAACGA
.....<<<<<<<..............................->>>>>>>---...<<<<<<<<<<<<-------....----------------->>>>>>>>>>>>.<<<<.<<<<<.-.-<<<<<<<<<<<----....---->>>>--........->>>--->>>>---<<<<.<<<<<<----.......------>>>>>>>>>>---.>>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<-----------------.........-------------->>>>...->>>>>><<<<.<<<<<<<......>>>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<<<<<<<<------....------>>>>.>>>>>>>>>>>>.......]]]]]].<<.<<<<<<........----.>>>>>>---<<<<<.<<.<<..<<<<....-..->>>>-..->>>>>>>>>--<<<<...<<<<<-------------...------------->>>>>.>>>>...------<<.<<<<<<<--------------------------------------------.........---------------------------------------->>>>>>>>.>--------......>>-..............
Aco.S989 ACUCACCAGGUU------------------AACAUUCGUCUG-GGCCUGG---AAUAGUGCGAGC----------A-GC-------------------GCUCGUAGCUAGUGCCGAAUCUCA-UCCACGCGGGG----AAGU----CCCC--AUUGUCGG-GCG---UGGA---GCGACC---------AAC--------------GGUCGU---GGUUCGGUGC-GACACCAGC-UGGUACAGGG-----GACGCCUCAC--------------CACGCA-------------GUGGCGGCCGA-UCCUGUGGCGAGUCCGA-GUCGCG-UCGGACCGUCGCAACGCACG-CAA-AGC-G-UGGGCUC-----------------UCCG------------------GAGCUUAAGGUACGUGCUAAUCCCAUCC---GAAA------GGAUGG---CUCCUCUG--ACUAGGCCCGACAC-GCC-GAAG-CAGGGGGG--GCCUCU-------------------CGCG----------------AGAGGUGUC------GGUCC-------------------------------------------------GCGA--------------------------------------------------GGACC--------------U-GGCCAGACACAACGA
.....<<<<<<<------------------............->>>>>>>---..<<<<<<<<<<----------.-..------------------->>>>>>>.>>><<<<<<<<<<...-<<<<<<<<<<<----....---->>>>--........->>>--->>>>---<<<<<<---------...-------------->>>>>>--->>>>>>>>>>-..<<<..<<-<...<<<<<<-----...<<<<<<<--------------......------------->>>>.>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>->->><<<<<-----------------....------------------>>>>>.......]]]]]].<..<<<<<<---....------>>>>>>---<<<<<<<<--.<<.<<<.......->>>-..>>->>>>>>>>--<<<<<<-------------------....---------------->>>>>>...------<<<<<-------------------------------------------------....-------------------------------------------------->>>>>-------------->-...............
Psp.S989 ACUCACCAGGUC-------------------GACUUCGUCUG-GGCCUGG---AAAAGUCGGGCGCCGGCC---ACAACG------------GGCAGGCGCUGCGGCUAGUAUCGAACUUCACUCCGCGUGGGG----AAGC----CCCC---UCGUCGG-GCG---CGGA---GGCGGCAGCC-----GUCGA-------GGU-CGCCGUU----GUUCGAUGC-GACACCAGC-UGGUACAGGG-----GACGCCAAACCGCUCAGC------AGGCC--------GCUGAGCGGUAGGCCAA-UCCUGUGGCGAGCUCGG-GUUGCG-CCGAGCCGCUGCAACGCGCG-CUA-AGCGG-UGGGCUGGGGGAGC----------GUUCAG---------GCUCUCCUGGCUUAAGGUACGUGCUAAUCCCGCAG---GGAA------CUGCGG---CCCCUCCG--AACAGGUCCGACUUCACC-GAAGCGG-AGGGG--GCGGUGCGUCGAGC-----------GAAA-------GCCC-GGCGUGCCGUGCU-------------------------------------------------------------------------------------------------------------------------------GUGAUGAU-GCCAGACACAAUGA
.....<<<<<<<-------------------...........->>>>>>>---...<<<<<<<<<<<.<<<---......------------>>>.>>>>>>.>>>>>.<<<<<<<<<.....<<<<<<<<<<<----....---->>>>---.......->>>--->>>>---<<<<<<.<<<-----.....------->>>-.>>>>>>---->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<..<<<<<<<<<<------.....-------->>>>>>>>>>.>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<<<<----------......--------->>>>>>>>>>>>.......]]]]]].<<<<<<<<<---....------>>>>>>---<<<<<<<<--....<<<........>>>-....>>>->>>>>--<<<<<<<<<<<.<<-----------....------->>.>->>>>>>>>>>...-------------------------------------------------------------------------------------------------------------------------------.....>>>-..............
Cpo.S989 ACUCACCAGGUU--------AACUCAAAACGUUACGCGUCUG-GGCCUGG--AAAAUGUAUAGAUUCU------CAUUGUA----------------AGAAUCUUGCCAGUAUCUCGCCG----------------------------------CUUG--------------------------------------------------------CGGUGGGAUGC-AACGCU-GC-UGGUUCAGGG-----AACAUCUAUCUCUA----------UUAG--------------UGGAGUGGUUGA-CCCUGCGGUGAGCCUUA-CAG----UAAGGCCAUUGCAACGCACA-CCA-AGCGG-CGGGCACCAAUGG-----------CACU----------CCAUUUGGCUGCUCCUAGUAUGUGCUAAU-CACGCGA--GGUAU----UCGC-UGUG-UAUGCCC7ntGGGAGAAUAAAUGAUUGCCCAACCGGGCAGGUG-CAAGGAUUACCUUC-----------CGAA--------AGUUAUUCUCCUUGGGGC----------------------------------------------------------------------------------------------------------------------------AAAAUAUAAU-GCCAGACACAAU-A
.....<<<<<<<--------......................->>>>>>>--....<<<<.<<<<<<<------.......---------------->>>>>>>>>>.><<<<<<<<<<<----------------------------------....-------------------------------------------------------->>>>>>>>>>>-..<<<<-<<-<....<<<<<-----..<<.<<<.<<<<<----------....-------------->>>>>>>>.>>.->>>>>.<<<<.<<<<<<-...---->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<<<-----------....---------->>>.>>>>.>>>>.......]]]]]].<<-<<.<<<<--.....---->>>>->>..-<<<<<<<~~~<<<..<<<.....>>>.>>>....>>>>..>>>-<<<<<<........-----------....--------........>>>>>>....----------------------------------------------------------------------------------------------------------------------------........>>-............-.
Leo_sp-4.S989 ACUCACCAGGUU-------------AACUACAGUUACGUCUG-GGCCUGG---AAUAGUU--------------AUUUGAC-----------------------AACUAGUACACGCCUUUA-CUUGUGUGGGAG---AAGU---CUCCC--AAUUUUGG-ACA---CAAG---GCCUUC---------UCCG-------------GAGGGU---UUGGCGGUGC-GACACUACC-UGGUACAGGG-----GACGCCUCGCUGGA----------GUGA-------------UCCGGCAGGCCGA-CUCUGUGGCGAGCUCGA-GUAACG-UCGAGCCGUCGCAACGCGCG-GAA-AGGAG-UGGGUUCGCUG-------------GAUCU-------------CAGCGGGCUUAAGGUACGUGCUAAUCCCAUGG---GAAA------CCAUG----CUCAGUGA--CGGAGGUCCAA-AU-GCC-AAAGUCA-CCGGG--GUUUCA-------------------GAGA----------------UGGAACGGUAUGG--UGGGAUCAU---------------------------------------------UUCG----------------------------------------------AUGAUCUCA------------AGUU-GCCAGACAUAAUAA
.....<<<<<<<-------------.................->>>>>>>---..<<<<<--------------.......----------------------->>>>><<<<.<<<<....-<<<<<<<<<<<<---....--->>>>>--........->>>--->>>>---<<<<<<---------....------------->>>>>>---..>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<.<<<<<<----------....------------->>>>>>>>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<-------------.....------------->>>>>>>>>.......]]]]]]<<<..<<<<<---....------>>>>>----<<<<<<<<--<...<<<....-..->>>-...>>>>->>>>>--<<<<<<-------------------....---------------->>>>>>.......--<<<<<<<<<---------------------------------------------....---------------------------------------------->>>>>>>>>------------.>>>-..............
Leo_sp-5.S989 ACUCACCAGGUU-------------AACUACAGUUACGUCUG-GGCCUGG---AAUAGUU--------------AUUUGAC-----------------------AACUAGUACACGCCUUUA-CUUGUGUGGGAG---AAGU---CUCCC--AAUUUUGG-ACA---CAAG---GCCCUU---------UCAG-------------GAGGGU---UUGGCGGUGC-GACACUACC-UGGUACAGGG-----GACGCCUCGCUGGA----------GUGA-------------UCCGGCAGGCCGA-CUCUGUGGCGAGCUCGA-GUAACG-UCGAGCCGUCGCAACGCGCG-GAA-AGGAG-UGGGUUCGCUG-------------GAUCU-------------CAGCGGGCUUAAGGUACGUGCUAAUCCCAUGG---GAAA-------CCAUG---CUCAGUGA--CGGAGGUCCAA-AA-GCC-UAAGUCA-CCGGG--GUUCCA-------------------GAGA----------------UGGAACGGUAUGG--UGGGAUCAU---------------------------------------------UUCG----------------------------------------------GUGAUCUCA------------AGAU-GCCAGACAUAAUAA
.....<<<<<<<-------------.................->>>>>>>---..<<<<<--------------.......----------------------->>>>><<<<.<<<<....-<<<<<<<<<<<<---....--->>>>>--........->>>--->>>>---<<<<<<---------....------------->>>>>>---..>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<.<<<<<<----------....------------->>>>>>>>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<-------------.....------------->>>>>>>>>.......]]]]]].<<<.<<<<<---....------->>>>>---<<<<<<<<--<...<<<....-..->>>-...>>>>->>>>>--<<<<<<-------------------....---------------->>>>>>.......--<<<<<<<<<---------------------------------------------....---------------------------------------------->>>>>>>>>------------.>>>-..............
Cbi.S989 ACUCACCAGGUU--------------------AAACACUCUG-GGCCUGG---AAAAGUGCGCCGGGCGCCC--CUCCU-------------GGGCGGCCCGCCCGCUAGUGUCAAGCUUCA-UCCGCG-UGGG----GAG-----CCCA--UUGUCGG---CG---CG-----A-C-GCC--------CUCU------------GGCCGUU----GCUUGAUGC-GACACCAGC-UGGAACAGGA-----GACGCCUCCCCGAG----------AGA------------CUCGCGGCGGCCAAA-UCCUGUGGCGAGCUCGG-GUAACGCCGAAACCGUCGCAACGCACG-CUA-AGCGG-UGGGCUCGCCCCUG----------UGA------------CGGGGGCGAGCUUAAGGUACGUGCUAGUCCCACGG---GAAA------CCGUGG---CCCCUCUGAAUAGGC--CCGACAGC--GCCGAAGCAGAGGGGGCGGGAGGGGCCC--------------GACGCA----------GGGCCCUUCCGGGAAC---GGCCCCGGGCGGUCUGGGA-----------------------------------GUUCAGA------------------------------------UCCCCCGCCCGCGGCC------------UUC--GCCAGACACAAUGA
.....<<<<<<<--------------------..........->>>>>>>---...<<<<.<<.<<.<<<<<--.....------------->>>>>.>>.>>.>>>>.<<<<<<<<<....-..<<<<-<<<<----...----->>>>--.......--->>--->>-----<-<-<<<--------....------------>>>.>>.---->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<.<<.<<<<----------...------------>>>>.>>.>>>....->>>>>><<<<...<<<<-......>>>>...>>>>...[.[[[[[-...->>>>>->><<<<<<<<<<<<----------...------------>>>>>>>>>>>>.......]]]]]].<..<<<<<<---....------>>>>>>---<<<<<<<<....<<<--........-->>>....>>>>>>>>...<<<<<<<<<<--------------......---------->>>>>>>>>>......---<<<<.<<<<<<<...<<<<-----------------------------------.......------------------------------------>>>>>>>>>>>.>>>>------------..>--..............
Cca.S989 -CUCACCAGGUU-----------------AACGAAUCGUCUG-GGCCUGG---AAAAGUAGGGCGCGCCUUCC--CCCG-----------GGGGGGUCGCGGCCUGCUAGUGUCGAACAUCA-UCCGCGCGGGG----AAGC----CCCC--UCUGUCGG-GCG---CGGA---G-CGGC---------CACG-------------GCCG-U---AGUUCGGUGC-GACACCAGC-UGGAACAGGG-----GACGCCUCACCGCGG---------GAGA-------------CCGCGGCGGCCGA-CCCUGUGGCGAGCUCAG-GUAGCG-CUGAGCCGUCGCAACGCGCG-CUA-AGCGG-UGGGCCUC----------------UCAC-----------------GGGGCUUAAGGUACGUGCUAAUCCCGCAG---GAAA------CUGCGG---CUCCCCUG--AAUAGGCCCGACAG-GCC-GAAGCAGC-GGAG--GCGGGCGCCCUG-------------CCCCC--------CAGGGCCGCCCGUGCAA--GU-CGGUCGCGGCGUCGUCC-------------------------------------CCCCCC-----------------------------------GGACGGCCGCCGCGGCCG------------CGUU-GCCAGACACAACGA
-....<<<<<<<-----------------.............->>>>>>>---...<<<<<.<<<<<<<<<<<--....----------->>>>>>.>>>>.>>>>>>.<<<<<<<<<....-<<<<<<<<<<<----....---->>>>--........->>>--->>>>---<-<<<<---------....------------->>>>->---.>>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<...<<<<<<---------....------------->>>>>>.>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<----------------....----------------->>>>>>.......]]]]]]<<<.<<<<<<---....------>>>>>>---<<<<.<<<--....<<<.......->>>-....>>>.->>>>--<<<<<<<<<<<<-------------.....-------->>>>>.>>>>>>>....--..-<<<<<<<<<<<<<<<<<-------------------------------------......----------------------------------->>>>>>.>>>>>>>>>>>------------.>>>-..............
Ccocc.S989 ACUCACCAGGUU---------GAAGGAGGACGAGACCGUCUG-GGCCUGG---AACAGUG---GCGGGCGCCU--ACCC------------AGGCGCCCUCGCCCGCUAGUGUCGAGCCUCA-UCCGCGCGGGG----AAGC----CCCC--GUUGUCGG-GCG---CGGA---G-CGGCGCACCC---CUCGCCC-----GGGUGCGCCGU---GGCUCGAUGC-GACACCAGC-UGGAACAGGG-----GACGCCCACCCGCGG---------GAGA-------------CCGCGGAGGCCGA-CCCUGUGGCGAGCCCAG-GUUGCU-CUGGGCCGUCGCAACGCGCG-CAA-AGCGG-UGGGCCGAAUCGCCC---------GAGG-----------GGGCGGUCGGCUUAAGGUACGUGCUGAUCCCACGG---GACGA-----CCGUGG---CUCCCCUG--AAUAGGCCCGACAC-GCC-GAAGCAGCGGGAG--GCGGGCGGCACCCCC----------UCGC--------GGGGGGCCGCCCGGGGAA-----GGGCGCCGCCGGGG----------------------------------------ACCG------------------------------------------UCCCGGGGCGCCC-------------AGU-GCCAGACACAACGA
.....<<<<<<<---------.....................->>>>>>>---...<<<<---<<<<<<<<<<--....------------>>>>>>>>..>>.>>>>.<<<<<<<<<....-<<<<<<<<<<<----....---->>>>--........->>>--->>>>---<-<<<<<<<<<<---.......----->>>>>>>>>>>---.>>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<...<<<<<<---------....------------->>>>>>.>>>...->>>>>><<<<.<<<<<<-<....>->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<.<<<<<<---------....----------->>>>>>>>>>>>.......]]]]]].<<.<<<<<<---.....----->>>>>>---<<<<<<<<--....<<<.......->>>-....>>>.>>>>>--.<<<<<<<<.<<<<<----------....-------->>>>>>>>>>>>>.....-----<<<<<<<.<<<<<<----------------------------------------....------------------------------------------>>>>>>>>>>>>>-------------.>>-..............
Ccoch.S989 ACUCACCAGGUU-------GACCACAGAGGAUCUAUCGUCUG-GGCCUGG---AACAGUGAAGGCGGGCGUC---CACC-------------GGCGCCC--GCCCGCUAGUGUCGGACCUCA-UCCACGCGGGG----AAGC----CCCC--GUUGUCGG-GCG---UGGA---G-CGGUCGUCCCC--CACC--G-----GGGGCGCCG-U---GGUCCGAUGC-GACACCAGC-UGGAACAGGG-----GACGCCUACCCGCGG---------GAGA-------------CCGCGGCGGCCGA-CCCUGUGGCGAGCUCGG-GUUGCU-CCGAGCCGUCGCAACGCGCG-CUA-AGCGG-UGGGCCGGGCCGUC----------CCUCGA----------GGCGGCCGGCUUAAGGUACGUGCUGAUCCCACGG---GACAA-----CCGUGG---CUCCCCUG--AAUAGGCCCGACAA-GCC-GAAGCAGCGGGAG--GCGGGCGGCGAGG------------CUCC---------CCUCUCCGCCCGGGAA------GGCGCC------------------------------------------------CUCG-------------------------------------------------GGCGCC------------GAAU-GCCAGACACAACGA
.....<<<<<<<-------.......................->>>>>>>---...<<<<..<<<<<<<<<<---....------------->>>>>>>-->>>>>>>.<<<<<<<<<<...-<<<<<<<<<<<----....---->>>>--........->>>--->>>>---<-<<<.<<<<<<<--....-->----->>>>>>>>>->--->>>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<...<<<<<<---------....------------->>>>>>.>>>...->>>>>><<<<.<<<<<<-<....>->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<.<<<<<----------......---------->>>>>>>>>>>.......]]]]]].<<.<<<<<<---.....----->>>>>>---<<<<<<<<--....<<<.......->>>-....>>>.>>>>>--.<<<<<<<.<<<<------------....--------->>>>.>>>>>>>....------<<<<<<------------------------------------------------....------------------------------------------------->>>>>>------------..>>-..............
Cin.S989 ACUCACCAGGUU------------------------AAUCUG-GGCCUGG---AAAAGUGA---C-GGCUUC---GUAG-------------GGAGCCC----UUGCUAGUAUCAAACUUCA-UCCGCGUGGGG----AAGC----CCCC--AAAGUCGG-GCG---UGGA---G-CGGC---------CUCGU------------GCCG-U---UGUUUGAUGC-GACACCAGC-UGGAACAGGG-----GACGCCCAACUGCAA---------GCGA-------------UUGCAGCGGCCAA-UCCUGUGGCGAGCUCAG-GUAGCG-CUGAGCCGUCGCAACGCGCG-CAA-AGCGG-UGGGCCUCCU--------------UCGC---------------GGGAGGCUUAAGGUACGUGCUAAUCCCACAG---GGAA------CUGUGG---CUUCACCG--AAUAGGCCCGGCA--GCC-GAAGCGG-UGAGG--GCGGGCGGCC---------------GUCGA-----------GGUCGCCUGCGUG------UGCGGUUACGGCGGCGCU------------------------------------GAUGAACGA--------------------------------AGCGCCGCCGUGGCCGCG--------------UU-GCCAGACACAACGA
.....<<<<<<<------------------------......->>>>>>>---...<<<<<---.-<<<<<<---....------------->>>>>>.---->>>>>.<<<<<<<<<<...-<<<<<<<<<<<----....---->>>>--........->>>--->>>>---<-<<<<---------.....------------>>>>->--->>>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<...<<<<<<---------....------------->>>>>>.>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<--------------....--------------->>>>>>>>.......]]]]]]<<..<<<<<<---....------>>>>>>---<<<<<<<<--....<<<......-->>>-....>>>->>>>>--<<<<<<<<<<---------------.....----------->>>>>>>>>>...------<<<<<<<<<<<<<<<<<<------------------------------------.........-------------------------------->>>>>>>>>>>>>>>>>>-------------->>-..............
Cka.S989 ACUCACCAGGUC-------------------GACUUCGUCUG-GGCCUGG---AAAAGUCGGGCGCCUGCUGCCAACAGCACAA------CGGCAGGCGCUGCAGGCUAGUAUCGAACUUCACUCCGCGUGGGG----AAGC----CCCC--UC-GUCGG-GCG---CGGA---GGCGGCAGCC-----GUCGA-------GGC-CGCCGUU----GUUCGAUGC-GACACCAGC-UGGUACAGGG-----GACGCCGAGCCAACGCAGCGG---GCUGCUAG--CUGCUGCGUGGGCAGGCCAA-UCCUGUGGCGAGCUCGG-GUUGCG-CCGAGCCGCUGCAACGCGCG-CUA-AGCGG-UGGGCUGGGGGAGCU---------CGUUCA--------GGCUCCUCUGGCUUAAGGUACGUGCUAAUCCCGCAG---GGAA------CUGCGG---CCCCUCUG--AACAGGUCCGACUUCACC-GAAGCGG-AGGGG--GCGGUGCGCCGAGC-----------GAGA-------GCCCGGGCGUGCCGUGUC-------------------------------------------------------------------------------------------------------------------------------GUGAUGAU-GCCAGACACAACGA
.....<<<<<<<-------------------...........->>>>>>>---...<<<<.<<<<<<<<<<<............------>>>>>>>>>>>...>>>>.<<<<<<<<<.....<<<<<<<<<<<----....---->>>>--..-.....->>>--->>>>---<<<<<<.<<<-----.....------->>>-.>>>>>>---->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<..<<<.<<<<<<<<<---........-->>>>>>>>>.>>>.>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<<<<<---------......-------->>>>>>>>>>>>>.......]]]]]].<<<<<<<<<---....------>>>>>>---<<<<<<<<--....<<<........>>>-....>>>->>>>>--<<<<<<<<<<<.<<-----------....------->>.>.>>>>>>>>>>...-------------------------------------------------------------------------------------------------------------------------------.....>>>-..............
Cpro.S989 ACUCACCAGGUU-------------------GGCUUUGUCUG-GGCCUGG---AAAAGUCGGGCGCUCGC----UACGG-------------GCGAGGCGCUGCGGCUAGUAUCGAGCUUCACUCCGCGUGGGG----GAGC----CCCC--UC-GUCGG-GCG---CGGA---GACGGCACCCCA---GCCCC-U-----GGGGCGCCGUU----GCUCGAUGC-GACACCAGC-UGGUACAGGG-----GACGCC------------------UUAACC------------------GGCCGA-UCCUGUGGCGAGCUCGG-GUUGCG-CCGAGCCGCUGCAACGCGCG-CUA-AGCGG-UGGGCUGGAAAGGGUGAGGGAGCCCCCCGUGGCUCCCCAUCCCCUCCGGCUUAAGGUACGUGCUAAUCCCACAG---GGAA------CUGUGG---CCUCUCUG--ACCAGGUCCGAC-UCACC-GAAGCAG-AGAGG--GCGACGCCCAGCGAGCGAAACCCCCUACCCGGGGGAGAGAGCUGGCGCCGUG--------UGUGGGCUUCUUGC----------------------------------------CGCG-----------------------------------------GCGAGAGGCCCACG--------------AU-GCCAGACACAACGA
.....<<<<<<<-------------------...........->>>>>>>---...<<<<<<<<<<<<<<----.....------------->>>>.>>>>>.>>>>>.<<<<<<<<<.....<<<<<<<<<<<----....---->>>>--..-.....->>>--->>>>---<<<<<<.<<<<<---.....->----->>>>.>>>>>>---->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<------------------......------------------>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<..<<<<<.<<<<<<<......>>>>>>>>>>>>..>>>>>>>.......]]]]]].<<.<<<<<<---....------>>>>>>---<<<<<<<<--....<<<.....-..>>>-....>>>->>>>>--<<<.<<<<.<<<........<<<<<.....>>>>>.....>>>>>>>.>>>.--------<<<<<<<<<<<<<<----------------------------------------....----------------------------------------->>>>>>>>>>>>>>-------------->>-..............
Cram.S989 ACUCACCAGGUC-------------------GACUUCGUCUG-GGCCUGG---AAAAGUCGGGCGCCGGCC----ACAAC------------GGCAGGCGCUGCGGCUAGUAUCGAACUUCACUCCGCGUGGGG----AAGC----CCCC--UC-GUCGG-GCG---CGGA---GACGGCAGCC-----GUCGA-------GGUUCGCCGUU----GUUCGAUGC-GACACCAGC-UGGUACAGGG-----GACGCCGAACCGCUCAGC------AGGCC-------GCUGAGCGGUAGGGCCAA-UCCUGUGGCGAGCUCGG-GUUGCG-CCGAGCCGCUGCAACGCGCG-CUA-AGCGG-UGGGCUAGGGGAAGC---------GUUUAG---------GCUCCUCUGGCUUAAGGUACGUGCUAAUCCCGCAG---GGAA------CUGCGG---CCCCUCCG--AACAGGUCCGACUUCACC-GAAGCGG-AAGGG--GCGGCGCGUCGAGC-----------GAAA-------GCCC-GGCGCGCCGUGCU-------------------------------------------------------------------------------------------------------------------------------GUGAUGAU-GCCAGACACAACGA
.....<<<<<<<-------------------...........->>>>>>>---...<<<<<<<<<<<.<<<----.....------------>>>.>>>>>>.>>>>>.<<<<<<<<<.....<<<<<<<<<<<----....---->>>>--..-.....->>>--->>>>---<<<<<<<<<<-----.....------->>>>.>>>>>>---->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<..<<<<<<<<<<------.....------->>>>>>>>>>..>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<<.<<---------......--------->>>>>>>>>>>>.......]]]]]].<<<<<<<<<---....------>>>>>>---<<<<<<<<--....<<<........>>>-....>>>->>>>>--<<<<<<<<<<<.<<-----------....------->>.>->>>>>>>>>>...-------------------------------------------------------------------------------------------------------------------------------.....>>>-..............
Csob.S989 ACUCACCAGGUU---------------------AACCGUCUG-GGCCUGG---AAUAGUGGCGAGGC-------CUUGGU--------------GCCUCUCGCUUGCUAGUAUCGAAACUCA-UCCGCGUGGGG----AAGC----CCCC--GUUGUCGG-GCG---CGGA---G-CGGUCGCC-----GAAU--------GGCCGGCCG-U---AGUUCGAUGC-GACACCAGC-UGGAACAGGG-----GACGCCUCCCUGCGG---------GAAA-------------CCGCAUAGGCCAA-CCCUGUGGCGAGCUCAG-GUUGCG-CUGAGCCGUCGCAACGCGCG-CUA-AGCGG-UGGGCCGGGGCACUGCGU------GCCGA-----ACGCAGUGGCCCCGGCUUAAGGUACGUGCUAAUCCCACGG---GAAA------CCGUGG---CUCCCCUG--AGUAGGCCCGACAGCGCCGGAAGCAGGGGGAG--GCGGGCGGGAGCUCC----------CCCC-------GGGGCCCCCGUCCGCGUACA----AGGGUUCUCGGUGGCCGUCGGGGCGU----------------------------GUGCA------------------------------GCGCGCCGUCGCCGCCGAGGCCCU------------GCUU-GCCAGACACAACGA
.....<<<<<<<---------------------.........->>>>>>>---..<<<<<<<<<<<<-------......-------------->>>>>..>>.>>>>><<<<<<<<.<<..-<<<<<<<<<<<----....---->>>>--........->>>--->>>>---<-<<<<<<<<-----....-------->>>.>>>>>->--->>>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<...<<<<<<---------....------------->>>>>>.>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<<<<<<<<------.....----->>>>>>>.>>>>>>>>>.......]]]]]]<<..<<<<<<---....------>>>>>>---<<<<<<<<--....<<<........>>>.....>>>.>>>>>--<<<<<<<<<.<<<<<----------....------->>>>>.>>>>>>>>>.....----<<<<<.<<<<<<<<<...<<<.<<<<----------------------------.....------------------------------>>>>.>>>..>>>>>>>>>>>>>>------------..>>-..............
Co_sp-1.S989 ACUCACCAGGUC---------------------AACUGUCUG-GGCCUGG---AAUAGUGGCGAGGC-------CUUUUGU-------------GCCUCUCGCCCGCUAGUAUCGAGACUCA-UCCGCGUGGGG----AAGC----CCCC--GUUGUCGG-GCG---CGGA---G-CGGUGGCC-----GAAU--------GGCUGGCCG-U---AGUUCGAUGC-GACACCAGC-UGGAACAGGG-----GACGCCUCCCUGCGG---------GAAA-------------CCGCAUAGGCCAA-CCCUGUGGCGAGCUCAG-GUUGCG-CUGAGCCGUUGCAACGCGCG-CUA-AGCGG-UGGGCCGGGCUG------------CUAGAGA----------CAGCCCGGCUUAAGGUACGUGCUAAUCCCACGG---GAAA------CCGUGG---CUCCCCUG--AAUAGGCCCGACA-CGCC-GAAGCAGCGGGAG--GUGGGCGGCUCG-------------CUA---------CGGG-CCGGCCCGCGU-------GUUUGGUUGCGGUAGCUUCGUAUACGUAU-------------------------ACUCUAC-------------------------GUGCGUAGCAGUUACCGCGACACGGAU------------GAAU-GCCAGACACAACGA
.....<<<<<<<---------------------.........->>>>>>>---..<<<<<<<<<<<<-------.......------------->>>>>..>>.>>>>><<<<<<<.<<<..-<<<<<<<<<<<----....---->>>>--........->>>--->>>>---<-<<<<<<<<-----....-------->>>>.>>>>->--->>>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<...<<<<<<---------....------------->>>>>>.>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<<------------.......---------->>>>>>>>>>.......]]]]]].<<.<<<<<<---....------>>>>>>---<<<<<<<<--....<<<......-.>>>-....>>>.>>>>>--<<<<<<<<<<<<-------------...--------->>>>->>.>>>>>>..-------<<<<<<<<<<<<<<<<<..<<.<<<<<<<-------------------------.......------------------------->>>>>>>>>>>>>>>>>>>>>.>>>>>------------..>>-..............
Cya.S989 ACUCACCAGGUC---------------------GACCGUCUG-GGCCUGG---AACAGUGGCGGGGGGC-----CUCCGC--------------GCCUCCCGCCCGCUAGUAUCGAAACCUCAUCCGCGUGGGG----AAGC----CCCC--GUUGUCGG-GCG---CGGA---G-CGGCCGCC-----GAAC--------GGCGGGCCG-U---GGUUCGAUGC-GACACCAGC-UGGAACAGGG-----GACGCCUCCCUGCGG---------GAAA-------------CCGCACAGGCCAA-CCCUGUGGCGAGCUCAG-GUUGCG-CUGAGCCGUCGCAACGCGCG-CUA-AGCGG-UGGGCCUGGCCUGCU---------AGAAGA---------GGCAGCCAGGCUUAAGGUACGUGCUAAUCCCGCGG---GAAA------CCGCGG---CUCCCCUG--AAUAGGCCCGACA-CGCC-GAAGCAGCGGGAG--GCGGGCGGCUCG-------------CUG---------CGGG-CCGGCCCGC---------GUGUGUGGUCGCGGUAGCU-----------------------------------UCCUGU-----------------------------------AGCUACCGCGGCCCAGGC------------AGAU-GCCAGACACAACGA
.....<<<<<<<---------------------.........->>>>>>>---...<<<<<<<<<<<<<-----......-------------->>>>>>>>>.>>>>.<<<<<<<<.<<...<<<<<<<<<<<----....---->>>>--........->>>--->>>>---<-<<<<<<<<-----....-------->>>>.>>>>->--->>>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<...<<<<<<---------....------------->>>>>>.>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<.<<<<---------......--------->>>>>>>>>>>>.......]]]]]].<<<<<<<<<---....------>>>>>>---<<<<<<<<--....<<<......-.>>>-....>>>.>>>>>--<<<<<<<<<<<<-------------...--------->>>>->>.>>>>>>---------<<.<<.<<<<<<<<<<<<<-----------------------------------......----------------------------------->>>>>>>>>>>>>>>.>>------------.>>>-..............
Chy.S989 ACUCACCAGGUU-AACUACUACGCGCAGUAGAUGCACGUCUG-GGCCUGG---AAAAGUAGG------------CUUAGU----------------------CCUGCUAGUGCCGAC-UUUA-CCUACGUGGAGGAA-GCAAUUGCCUCC--AACUCAGG-GCG---UAGG--CGAUGGCUU-------UAAU-----------AAGCCGUC--GUG-UCGGUGC-GACACCAGC-UGGUACAGGG-----GACGCCUAACCGUCU---------UAUAG----------GGACCGGCGGCCCGA-UCCUGUGGCGAGCCCGA-GUAGCG-UCGGGCCGUCGCAACGCACG-CUA-AGCGG-UGGGCUCUC---------------AACA----------------GAGGGCUUAAGGUACGUGCUAAU-CCACGG---GAUAA-----CCGUGG---CCGCCUUG--ACUAGUUCCGAGUUUAC--GAAGCAA-GGCGG--GGGUGGACAGGCGCU----------GCAA-------GGCCCUUGUCUGCUUGUGGAA---CAAUUUUCUAGUAAAGUCAUA---------------------------------UGU---------------------------------UAUGAAGCUUUAUUGGAGAGUUG---------AAAAAAU-GCCAGACACAA-G-
.....<<<<<<<-.............................->>>>>>>---...<<<<<<------------......---------------------->>>>>>.<<<<<<<<-....-<<<<<<<<<<<<<<-....>>.>>>>>--........->>>--->>>>--.<<<<<<<<-------....----------->>>>>>>>--..>->>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<...<<<<<<---------.....---------->>>.>>>.>>>....->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<---------------....---------------->>>>>>>.......]]]]]].<<-<<<<<<---.....----->>>>>>---<<<<<<<<--....<<.........>>--....>>>->>>>>--<<<<<<<<<<<.<<<----------....------->>>.>>>>>>>>>>>......---<<<<<<<<<<<<<<<<<<<<<---------------------------------...--------------------------------->>>>..>>>>>>>>>>>>>>>>>---------.....>>-...........-.-
Rne.S989 ACUCACCAGGUU----------AACUGAACAGUUACUGUCUG-GGCCUGG---AAUAGUGA-------------UUUGUU-----------------------UCGCUAGUGCUAGACACUUGUCUACGUGGGA----AAGC----UCCC--GAUUCGG--ACG---UAGA---G-CGGUGGC------CUC-----------GCUACCG-U---UGUCUAGUGC-A-CACCAGC-UGGUACAGGG-----AACGCUAACCCUAC----------AUUC-------------GUAGGUAUGCCAA-UCCUGUGGCGAGCUCAG-GUUGCG-CUGAGCCGUUGCAACGCGCG-GNAAAGCGG-UGGGCUGCGUC-------------UAUUC-------------GACGUGGCUUAAGGUACGUGCUAAUCCUACGA---GAAA------UCGUAG---CCUUCUUG--ACUAGGUCCGAAUGU-CC-UAAUCAA-GGAGG--GCAGGGCNCGGCUUGU---------UUUACU----GCAAGCCCGGCCCUGCGUGUUGGGGGGGGGGGGGGGGAUA---------------------------------------GACGA---------------------------------------UGUGCCCGCCCCUCU---------GGAGAAU-G-CAGACACAAUGA
.....<<<<<<<----------....................->>>>>>>---..<<<<<<-------------......----------------------->>>>>><<<<<<<<<.....<<<<<<<<<<<----....---->>>>--.......-->>>--->>>>---<-<<<<<<<------...----------->>>>>>>->---.>>>>>>>>>-.-<<<<.<<-<...<<<<<<-----...<<....<<<<<----------....------------->>>>>...>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-....>>>>>->><<<<<<<<<-------------.....------------->>>>>>>>>.......]]]]]].<<.<<<<<<---....------>>>>>>---<<<<<<<<--<.<<<<.........->>->>.>>>>->>>>>--<<<<<<<.<<<<<<<<---------......---->>>>>.>>>>>>>>>>.........<<<<<<<.<<<.<<<---------------------------------------.....--------------------------------------->>>.>>>.>>>>>>>---------.....>>-.-............
Xpo.S989 ACUCACCAGGUU----------AACUGAACAGUUNCUGUCUG-GGCCUGG---AAAAGUGA-------------UUAAUU-----------------------UUGCUAGUGCUAGACACUCGUCUACGCGGGA----AAGC----UCCC--GAUUCGG--GCG---UAGA---GCGGUAGC-------ACU------------GCUAUCG---AUGUCUAGUGC-GACACCAGC-UGGUACAGGG-----GACGCCUCAUACCU----------UAUU--------------AGGUACGGCCGA-UCCUGUGGCGAGCUCAG-GUUGCG-CUGAGCCGUUGCAACGCGCG-CAA-AGCGGAUGGGCUAUAUA-------------UNUA--------------UAUAUGGCUUAAGGUACGUGCUAAUCCUAUGA---GAAA------UCGUAG---CCUCCUUG--AAUAGGUCCGAAUAU-CC-AAAGCAA-GGAGG--GCAAGGCUGGUCU-GU---------UUAUU-----ACAUACUUAGCCUUGCGUAUUUA--AGGGGAAGGAUAUAUAUAUAUACUAAAGUUCUUAUGGC----------------UUUAUU-----------------------GUCAUAGGUUCUUAGUAUAUACUUUCUCCU--------CUCAAAGU-GCCAGACACAAUGA
.....<<<<<<<----------....................->>>>>>>---...<<<<<-------------......----------------------->>>>>.<<<<<<<<<<....<<<<<<<<<<<----....---->>>>--.......-->>>--->>>>---.<<<<<<<-------...------------>>>>>>>---.>>>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<...<<<<<----------....-------------->>>>>.>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>.>><<<<<<<<<-------------....-------------->>>>>>>>>.......]]]]]].<<.<<<<<<---....------>>>>>>---<<<<<<<<--....<<.........->>-....>>>->>>>>--<<<<<<<<<<<.<-<<---------.....----->>>.>>.>>>>>>>>>.......--<<<<<<<<<.......<<<<<<<<<<.<..<<<<<<<<----------------......----------------------->>>>>>>>..>>>>>>>>>>>>>>>>>>>>--------......>>-..............
Eca.S1199-1 CAAUAACAGGUUAAC--------------------CUUCACA-GGCCUGU---CACAGUGAA----------CCUCGCUAAAUAA-----------------UUCGCUAGUCAA-GUAUCUUUGCCCCCGCAAGGUGGAAGU--CCACCC-ACUGUCGGGAUGG----GG----AACGACCUC------GAGA---------GAGGUGCGUU----GAUGCUGGC-GAGACAAUC-UUGUUCAGGG-----GACGCUUCCCUAC-----------CACG---------------GUAGGUGCCAA-UCCUGAGGCGAGCCGAA-GUAACG-UUCGGCCGUCGCAACGUGCG-CAG-AGAUG-UCGGCCGUGCC-------------UCC---------------GGCAUGGCUUAAGGUACGUACUAAUCCCCCAA---GAAA-------UUGGG---CUCCUGCA--AUAAGGUCCGACAGGCCGAGG---UGCAGGGG--GGCUCUCCGGGGCU-----------GGUAUGU------GGUCCUCGAGACC--------------------------------------------------------------------------------------------------------------------------------ACAUGUAAAU-GCUGUGAUGCCCUU
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<<----------.............----------------->>>>>>.<<<<.-<<<<<.....<<<<<...<<<<<....-->>>>>.-..........>>>---->>----<<<<<<<<<------....--------->>>>>.>>>>---->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<...<<<<<-----------....--------------->>>>>.>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<-------------...--------------->>>>>>>>>.......]]]]]].<<..<<<<<---....------->>>>>---<<<<<<<<--....<<<<.....>>>>....--->>>>>>>>--<<.<<<<.<<<<<<-----------.......------>>>>>>.>>>>>>--------------------------------------------------------------------------------------------------------------------------------........>>-..............
Eca.S1199-2 --AUAACAGGUUAAC--------------------CUUCACA-GGCCUGU---CACAGUGAA----------CCUCGCUAAAUAA-----------------UUCGCUAGUCAA-GUAUCUUUGCCCCCGCAAGGUGGAAGU--CCACCC-ACUGUCGGGAUGG----GG----AACGACCUC------GAGA---------GAGGUGCGUU----GAUGCUGGC-GAGACAAUC-UUGUUCAGGG-----GACGCUUCCCUAC-----------CACG---------------GUAGGUGCCAA-UCCUGAGGCGAGCCGAA-GUAACG-UUCGGCCGUCGCAACGUGCG-CAG-AGAUG-UCGGCCGUGCC-------------UCC---------------GGCAUGGCUUAAGGUACGUACUAAUCCCCCAA---GAAA-------UUGGG---CUCCUGCA--AUAAGGUCCGACAGGCCGAGG---UGCAGGGG--GGCUCUCCGGGGCU-----------GGUAUGU------GGUCCUCGAGACC--------------------------------------------------------------------------------------------------------------------------------ACAUGUAAAU-GCUGUGAUGCCCUU
--...<<<<<<<...--------------------.......->>>>>>>---...<<<<<<----------.............----------------->>>>>>.<<<<.-<<<<<.....<<<<<...<<<<<....-->>>>>.-..........>>>---->>----<<<<<<<<<------....--------->>>>>.>>>>---->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<...<<<<<-----------....--------------->>>>>.>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<-------------...--------------->>>>>>>>>.......]]]]]].<<..<<<<<---....------->>>>>---<<<<<<<<--....<<<<.....>>>>....--->>>>>>>>--<<.<<<<.<<<<<<-----------.......------>>>>>>.>>>>>>--------------------------------------------------------------------------------------------------------------------------------........>>-..............
Dat.S1199 CAAUAACAGGUGAC---------------------CGUCACA-GGCCUGU---AACAGCGGG--------GGCCCGCGUGAACGAACG--------------CCCGCUAGUCCA-ACAUCUUCAGACCCGU--GGGGGAAGC--CCUCCA-A-CAUCGGG-CGG----GUC---CGCGGCCU-------CUUG----------GGGUCUGCGU---GAUGUGGGC-AACACCACC-UGGUACAGGG-----GACGCCGUCGGGGCC---------UAGG------------GGCCUUGCGGUCGA-CCCUGUGGCGAGUCCGG-GUCGCG-CCGGACCGUCGCAACGCGCG-CUA-AGGGG-UGGGUUGGGCC-------------UCG---------------GGCCCGGCUUAAGGUACGUGCUAAUCCCUCGG---GAUGGAAA---CCGAG---CCCUCAUGA-GAUAGGCCCGAU-GGUCGAAG---CUCGAGGG--GACCUACAGAGGCC-----------UAG----------GGCCUCUGUGGUU-GGC-----GGGGCCGCGGUC------------------------------------------GCUCGGG----------------------------------------GACCGUGGCUCC-----------UAGAU-GCUGUGAUGCCCUU
.....<<<<<<...---------------------.......-.>>>>>>---...<<<<<<--------..................-------------->>>>>>.<<<<.-<<<<<....<<<<<<<--<<<<<....-->>>>>.-.-......>->>>---->>>---<<<<<<<<-------....---------->>>>>.>>>.--->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<.<<<<<<<---------....------------>>>>>>>>>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<-------------...--------------->>>>>>>>>.......]]]]]].<<<.<<<<<---........--->>>>>---<<<<<..<<-<...<<<<....->>>>....--->>>>>>>>--<<<<.<<<<<<<<<-----------...---------->>>>>>>>>>>>>-...-----<<<<<<<<<<<<------------------------------------------.......---------------------------------------->>>>>>>>>>>>-----------..>>>-..............
Pci.S1199-1 CAAUAACAGGUUGAC--------------------CUACACA-GGCCUGU---AACAGUGG-----------UCCUCUUUAAAAUA----------------UCCACUAGUCCAUGUAACG---UCUCCGU--AGGGGAAGC--CCCC-A-GCUAUCGGG-CGG----AGG---GGACUC---------GUA-------------GAG-UCCUA--GUUACGGGC-GACACCACC-UGGUACAGGG-----AACGCCGACCCGGGCGCGUCG---AAGA--------CGACGUCCCGAAGGCCGA-UCCUGUGGCGAGCUCGG-AUAGCG-CCGAGCCGUCGCAACGUGCG-CUA-AGGGG-UGGGCUGGCAG-------------CCA---------------UUGCCGGCUUAAGGUACGUACUGGCC-CACGG---GAAA-------CCGUG---CUCAUGUAG-UGGC-GCCCGAUAGGC-AAA--GCUGCAUGGG--GGCCUGCCGAC--------------ACGAC----------GUCGGCAGGUC-GGG------------------------------------------------------------------------------------------------------------------------------UUUUAACU-GCUGUGAUGCCCUU
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<-----------..............----------------.>>>>>.<<<<..<<<<<.---<<<<<<<--.<<<<....-->>>>-.-........>->>>---->>>---<<<<<<---------...------------->>>->>>..-->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<....<<<<.<<<<<<---....-------->>>>>>>>>>..>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<-------------...--------------->>>>>>>>>.......]]]]]]<<..-<<<<<---....------->>>>>---<<<<<<<<<-<...-<<<.....>>>-...-->>>>>>>>>>--<<<<<<<<<<<--------------.....---------->>>>>>>>>>>-...------------------------------------------------------------------------------------------------------------------------------......>>-..............
Pci.S1199-2 CAAUAACAGGUUGAC--------------------CUACACA-GGCCUGU---AACAGUGG-----------UCCUCUUUAAAAUA----------------UCCACUAGUCCAUGUAACG---UCUCCGU--AGGGGAAGC--CCCC-A-GCUAUCGGG-CGG----AGG---GGACUC---------GUA-------------GAG-UCCUA--GUUACGGGC-GACACCACC-UGGUACAGGG-----AACGCCGACCCGGGCGCGUCG---AAGA--------CGACGUCCCGAAGGCCGA-UCCUGUGGCGAGCUCGG-AUAGCG-CCGAGCCGUCGCAACGUGCG-CUA-AGGGG-UGGGCUGGCAG-------------CCA---------------UUGCCGGCUUAAGGUACGUACUGGCC-CACGG---GAAA-------CCGUG---CUCAUGUAG-UGGC-GCCCGAUAGGC-AAA--GCUGCAUGGG--GGCCUGCCGAC--------------ACGAC----------GUCGGCAGGUC-GGG------------------------------------------------------------------------------------------------------------------------------UUUUAACU-GCUGUGAUGCCCUU
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<-----------..............----------------.>>>>>.<<<<..<<<<<.---<<<<<<<--.<<<<....-->>>>-.-........>->>>---->>>---<<<<<<---------...------------->>>->>>..-->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<....<<<<.<<<<<<---....-------->>>>>>>>>>..>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<-------------...--------------->>>>>>>>>.......]]]]]]<<..-<<<<<---....------->>>>>---<<<<<<<<<-<...-<<<.....>>>-...-->>>>>>>>>>--<<<<<<<<<<<--------------.....---------->>>>>>>>>>>-...------------------------------------------------------------------------------------------------------------------------------......>>-..............
Pci.S1199-3 CAAUAACAGGUUGAC--------------------CUACACA-GGCCUGU---AACAGUGG-----------UCCUCUUUAAAAUA----------------UCCACUAGUCCAUGUAACG---UCUCCGU--AGGGGAAGC--CCCC-A-GCUAUCGGG-CGG----AGG---GGACUC---------GUA-------------GAG-UCCUA--GUUACGGGC-GACACCACC-UGGUACAGGG-----AACGCCGACCCGGGCGCGUCG---AAGA--------CGACGUCCCGAAGGCCGA-UCCUGUGGCGAGCUCGG-AUAGCG-CCGAGCCGUCGCAACGUGCG-CUA-AGGGG-UGGGCUGGCAG-------------CCA---------------UUGCCGGCUUAAGGUACGUACUGGCC-CACGG---GAAA-------CCGUG---CUCAUGUAG-UGGC-GCCCGAUAGGC-AAA--GCUGCAUGGG--GGCCUGCCGAC--------------ACGAC----------GUCGGCAGGUC-GGG------------------------------------------------------------------------------------------------------------------------------UUUUAACU-GCUGUGAUGCCCUU
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<-----------..............----------------.>>>>>.<<<<..<<<<<.---<<<<<<<--.<<<<....-->>>>-.-........>->>>---->>>---<<<<<<---------...------------->>>->>>..-->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<....<<<<.<<<<<<---....-------->>>>>>>>>>..>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<-------------...--------------->>>>>>>>>.......]]]]]]<<..-<<<<<---....------->>>>>---<<<<<<<<<-<...-<<<.....>>>-...-->>>>>>>>>>--<<<<<<<<<<<--------------.....---------->>>>>>>>>>>-...------------------------------------------------------------------------------------------------------------------------------......>>-..............
Pci.S1199-4 CAAUAACAGGUUGAC--------------------CUACACA-GGCCUGU---AACAGUGG-----------UCCUCUUUAAAAUA----------------UCCACUAGUCCAUGUAACG---UCUCCGU--AGGGGAAGC--CCCC-A-GCUAUCGGG-CGG----AGG---GGACUC---------GUA-------------GAG-UCCUA--GUUACGGGC-GACACCACC-UGGUACAGGG-----AACGCCGACCCGGGCGCGUCG---AAGA--------CGACGUCCCGAAGGCCGA-UCCUGUGGCGAGCUCGG-AUAGCG-CCGAGCCGUCGCAACGUGCG-CUA-AGGGG-UGGGCUGGCAG-------------CCA---------------UUGCCGGCUUAAGGUACGUACUGGCC-CACGG---GAAA-------CCGUG---CUCAUGUAG-UGGC-GCCCGAUAGGC-AAA--GCUGCAUGGG--GGCCUGCCGAC--------------ACGAC----------GUCGGCAGGUC-GGG------------------------------------------------------------------------------------------------------------------------------UUUUAACU-GCUGUGAUGCCCUU
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<-----------..............----------------.>>>>>.<<<<..<<<<<.---<<<<<<<--.<<<<....-->>>>-.-........>->>>---->>>---<<<<<<---------...------------->>>->>>..-->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<....<<<<.<<<<<<---....-------->>>>>>>>>>..>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<-------------...--------------->>>>>>>>>.......]]]]]]<<..-<<<<<---....------->>>>>---<<<<<<<<<-<...-<<<.....>>>-...-->>>>>>>>>>--<<<<<<<<<<<--------------.....---------->>>>>>>>>>>-...------------------------------------------------------------------------------------------------------------------------------......>>-..............
Pci.S1199-5 CAAUAACAGGUUGAC--------------------CUACACA-GGCCUGU---AACAGUGG-----------UCCUCUUUAAAAUA----------------UCCACUAGUCCAUGUAACG---UCUCCGU--AGGGGAAGC--CCCC-A-GCUAUCGGG-CGG----AGG---GGACUC---------GUA-------------GAG-UCCUA--GUUACGGGC-GACACCACC-UGGUACAGGG-----AACGCCGACCCGGGCGCGUCG---AAGA--------CGACGUCCCGAAGGCCGA-UCCUGUGGCGAGCUCGG-AUAGCG-CCGAGCCGUCGCAACGUGCG-CUA-AGGGG-UGGGCUGGCAG-------------CCA---------------UUGCCGGCUUAAGGUACGUACUGGCC-CACGG---GAAA-------CCGUG---CUCAUGUAG-UGGC-GCCCGAUAGGC-AAA--GCUGCAUGGG--GGCCUGCCGAC--------------ACGAC----------GUCGGCAGGUC-GGG------------------------------------------------------------------------------------------------------------------------------UUUUAACU-GCUGUGAUGCCCUU
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<-----------..............----------------.>>>>>.<<<<..<<<<<.---<<<<<<<--.<<<<....-->>>>-.-........>->>>---->>>---<<<<<<---------...------------->>>->>>..-->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<....<<<<.<<<<<<---....-------->>>>>>>>>>..>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<-------------...--------------->>>>>>>>>.......]]]]]]<<..-<<<<<---....------->>>>>---<<<<<<<<<-<...-<<<.....>>>-...-->>>>>>>>>>--<<<<<<<<<<<--------------.....---------->>>>>>>>>>>-...------------------------------------------------------------------------------------------------------------------------------......>>-..............
Ppa.S1199 CAAUAACAGGUUAAC--------------------CUACACA-GGCCUGU---GACAGUGGAG------------CCCUUAA-------------------UUCCGCUAGUCCA-GCAUCGUGAUCUCCUC--GGGGGUAGC--CCCCCU-AUUAUCGGG-AGG----AGA--CCGGGACCGUCGAAC-CUGCC----GUUCGCGCUC-CCGU---GAUGCGGGC-GACACCACC-UGGAACAGGG-----AACGCCUCGGG-------------GAGA----------------CCCAGGCCGA-UCCUGUGGCGAGUCUGA-GUCGCG-UCAGACCGUCGCAACGCGCG-CAA-AGGGG-UGGGCAACC---------------GUCGG---------------GGUUGCUUAAGGUACGUGCUAAUCCCUUGG---GAAA-------CCAAG---CUUCCGCA--AUGAGACCCGAUAAGUCGAGG---UGCGGGAG--GGCCAGCCC----------------CGG--------------GGGCUGGUC-GG------GGUCCGUCGAGGC-----------------------------------------UGGU------------------------------------------GCCGCGGCGGGCC------------AACU-GCUGUGAUGCCCU-
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<<<------------.......------------------->>>>>>>.<<<<.-<<<<<....<<<<<<<--<<<<<....-->>>>>.-........>->>>---->>>--.<<<<<.<<.<<<<<-.....---->>>>>>>.>>->>>.--->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<.<<<-------------....---------------->>>>>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<---------------.....--------------->>>>>>>.......]]]]]]<<<..<<<<<---....------->>>>>---<<<<<<<<--....<<<.......>>>....--->>>>>>>>--<<<<<<<<<----------------...-------------->>>>>>>>>-..------<<<<<<<<<.<<<-----------------------------------------....------------------------------------------>>>.>>>>>>>>>------------.>>>-.............-
Pte.S1199-1 CAAUAACAGGUUAAC--------------------CUACACA-GGCCUGU---AACAGUGGGCCUC-----------GUUAAA---------------GAUAACUACUAGUCCA-GUCACG-C-UCUCCGU---GGGGAAGU--CCCC-A-UCUAUCGGA-CGG----AGG---GGGCUC---------GCAA------------GAG-CCCUA--GUGUCGGGC-GACACCACC-UUGAACAGGG-----AACGCUGAUCCAGGGCAUCA----UUCC--------UGAUGCCCUGGAGGCCGA-UCCUGUGACGAGCUCGG-GUAACG-CCGAGCCGUCGCAACGUGCG-GUU-GGGGG-UGGGCCGGCA--------------GCCAU--------------UGCCGGUCUGAUGUACGUACUAGCC-CGCGG---GAAA-------CCGUG---CUCGUGUAG-U-GAGGCCCGAUAGGUCAA---GCUGCACGGG--GGCCUGCCGAC--------------AACGAC---------GUCGGCCGGCC-GGG------------------------------------------------------------------------------------------------------------------------------UCUUAACU-GCUGUGAUGCCC--
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<...<<-----------......--------------->>...>>>>>.<<<<.-<.<<<.-.-<<<<<<<---<<<<....-->>>>-.-........>->>>---->>>---<<<<<<---------....------------>>>->>>..-->>>.>>>>>-..<<<<.<<-<...<<<<<<-----...<<<..<<<<<<<<<<<<----....-------->>>>>>>>>>>>>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<--------------.....-------------->>>>>>>>.......]]]]]]<<..-<<<<<---....------->>>>>---<<<<<<<<<-<-..<<<<.....>>>>..--->>>>>>>>>>--<<<<.<<<<<<--------------......--------->>>>>>.>>>>-...------------------------------------------------------------------------------------------------------------------------------......>>-............--
Pob.S1199 CAAUAACAGGUUAAC--------------------CUUCACA-GGCCUGU---AACAGUAG------------AGCCGAUAAUA-------------------CUGCUAGUCCA-GCAUCCUAAUCUCCUC--UGGGGAAGC--CCCC-U-GUUAUCGGG-AGG----AGA---CGUGGCCGGGC----CUCCU-------GCUCGGC-CGCGC--GAUGCGGGC-GACACCACC-UGGUACAGGG-----AACGCCCCGG--------------GGCAA---------------CCGGGGCCGA-UCCUGUGGCGAGCCUGG-GUAGCG-CCAGGCCGUCGCAACGCGCG-GAA-AGGGG-UGGGCCGCUGCG------------ACCG-------------CGCAGCGGCUUAAGGUACGUGCUAAUCCCUUGG---GUUAA------CCAAG---CUCCCGCA--AUAAGACCCGAUAAGUCGAGG---UGCGGGGG--GGCCGGC------------------UCU----------------GCCGGCU-GG------UGCCCGUCGUG-------------------------------------------UCACC-------------------------------------------CACGGCGGGCG------------GAAU-GCUGUGAUGCCCUU
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<------------...........------------------->>>>>.<<<<.-<<<<<....<<<<<<<--<<<<<....-->>>>-.-.......>>->>>---->>>---<<<<<<<<<<<----.....------->>>>>>>->>>>.-->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<<<<--------------.....--------------->>>>>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<<------------....------------->>>>>>>>>>.......]]]]]].<<..<<<<<---.....------>>>>>---<<<<<<<<--....<<<.......>>>....--->>>>>>>>--<<<<<<<------------------...---------------->>>>>>>-..------<<<<<<<<<<<-------------------------------------------.....------------------------------------------->>>>>>>>>>>------------..>>-..............
Psa.S1199 CAAUAACAGGUUAAC--------------------CUUCACA-GGCCUGU---AACAGUAG------------AGCCGAGAAUA-------------------CUGCUAGUCCA-GCAUCCUAAUCUCCUC--GGGGGAAGC--CCCC-C-AUUAUCGGG-AGG----AGA---CGUGGCCGGGC----CUCCC-------GCCCGGC-CGCGA--GAUGCGGGC-GACACCACC-UGGUACAGGG-----AACGCCCCGG--------------GGUAA---------------CCGGAGCCGA-UCCUGUGGCGAGCCUGG-GUAGCG-CCAGGCCGUCGCAACGCGCG-GAA-AGGGG-UGGGCUGCUGCG------------ACCA-------------CGCGGCGGCUUAAGGUACGUGCUAAUCCCUUGG---GAAA-------CCAAG---CCCCCGCA--AUAAGACCCGAUAAGUCGAGG---UGCGGGGG--GGUCGGU------------------UCU----------------GCCGGCC-GG------UGUCCGUCGUG-------------------------------------------UC-UC-------------------------------------------CACGGCGGACG------------GAAU-GCUGUGAUGCCCUU
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<------------...........------------------->>>>>.<<<<.-<<<<<....<<<<<<<--<<<<<....-->>>>-.-.......>>->>>---->>>---<<<<<<<<<<<----.....------->>>>>>>->>>>.-->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<<<<--------------.....--------------->>>>>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<<------------....------------->>>>>>>>>>.......]]]]]].<<..<<<<<---....------->>>>>---<<<<<<<<--....<<<.......>>>....--->>>>>>>>--<<<<<<<------------------...---------------->>>>>>>-..------<<<<<<<<<<<-------------------------------------------..-..------------------------------------------->>>>>>>>>>>------------..>>-..............
Pra.S1199 CAAUAACAGGUUAAC--------------------CUACACA-GGCCUGU---CACAGUAG------------AGCCCAUAAUA-------------------CUGCUAGUCUA-GCAUC-UCAUCUUCUC--UGGGGAAGC--CCCC-U-GUUAUCGGG-AGA----AGA---CGCCGCUGAGC----CUCCC-------GCUCGGU-GGUGC--GAUGCANGC-GACACCACC-UGGUACAGGG-----AACGCCUCGG--------------GUCACA--------------CCGGGGCCGA-UCCUGUGGCGAGUCUGA-GUCGCG-UCAGACCGUCGCAACGCGCG-CAA-AGGGG-UGGGCCAUCCGUC-----------UCCG-------------GGCGAUGGCUUAAGGUACGUGCUAAUCCCUUGG---GUAA-------CCAAG---CCUCUGCA--AUGAGACCCGAUAAGUCGAGG---UGCAGGGG--GGCUAG-------------------UGCAA---------------CUAGUC-RG------GGUCCGUA----------------------------------------------SUCCC----------------------------------------------UACGGACC------------AUAU-GCUGUGAUGCCCU-
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<------------...........------------------->>>>>.<<.<.-<<<<<-...<<<<<<<--<<<<<....-->>>>-.-.......>>->>>---->>>---<<<<<<<<<<<----.....------->>>>>>>->>>>.-->>>>>>.>>-..<<<<.<<-<...<<<<<<-----...<<<<<<<--------------......-------------->>>>>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<.<<<-----------....------------->>>>>>>>>>.......]]]]]].<<..<<<<<---....------->>>>>---<<<<<<<<--....<<<.......>>>....--->>>>>>>>--<<<<<<-------------------.....--------------->>>>>>-..------<<<<<<<<----------------------------------------------.....---------------------------------------------->>>>>>>>------------..>>-.............-
Cme.S1199 GCAUAACAGGUUAAACUAA----------------AUUCACA-GGCCUGUUGAUCGAGUCUAUACC----------UUGC----------------GGUAUGGCGGCUGGACUA--------------------------------------UAAUGUC-------------------------------------------------------------UGGUU-UACACCA-C-UGGUACAGAG-----GAUGCC------------------GCUAUAAA----------------GGCCGA-UUCUGUGGCGAGCUUCG-ACCC---CGAAGCCGUCUCAACGCAUG-CAA-AGUGG-UGGGCCCGUA--------------GCUUAAAUA----------UACGGGCUUCAGGUACAUGCUGA-CCCCCCA---GCUUA-----UGGGCGGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AUGAAC-GCUGUGAUGCCCUU
.....<<<<<<<.......----------------.......->>>>>>>......<<<<<<<<<<----------....---------------->>>>>>>..>>>.<<<<<--------------------------------------.......------------------------------------------------------------->>>>>-..<<<<<-<-<...<<<<<<-----...<<<------------------........---------------->>>...->>>>>><<<<.<<<<<<-....--->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<--------------.........---------->>>>>>>>.......]]]]]]<<-<<<<<<<---.....----->>>>.>>>------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------....>>-..............
Opa.S1199 --AUAACAGGUUG----------------------ACACACA-GGCCUGU---AACAGUGGU-----------CCUCGCUAAAAAUA---------------ACCGCUAGUCGAUGCAUC--GCUCUCCGU---GGGGAAGC--CCCC-G-AUUAUCGGG-CGG----AG----GUACGCC--------CGCA------------GGC-GUACA--GAUGCCGGC-AACACCACC-UGGUACAGGG-----GACGCCUCCUGGC-----------UUCGCC------------GCCAGAGGCCAA-UCCUGUGGCGAGCUCGG-GUCGCG-CCGGGCCGUCGCAACGCGCG-CAA-AGGGG-UGGGCCGGCCU-------------UCAGAC------------AGGCCGGCUUGAGGUACGUGCUAAUCCCACGG---GAAA-------CCGUG---CUCUCGCA--AGAAGACCCGAUAAGUCGAG---CUGCGAGGG--GGCCCUCCGCC-------------GCCAA-----------GGCGGGGGGCC-GGU-------------------------------------------------------------------------------------------------------------------------------GAUCGAU-GCUGUGAUGCCCUU
--...<<<<<<<.----------------------.......->>>>>>>---...<<<<<<-----------..............--------------->>>>>>.<<<<..<<<<<--...<<<<<<---<<<<....-->>>>-.-........>->>>---->>----<<<<<<<--------....------------>>>->>>>.-->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<<.<<<<-----------......------------>>>>>>>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<-------------......------------>>>>>>>>>.......]]]]]].<<<.<<<<<---....------->>>>>---<<<<<<<<--....<<<.......>>>...---.>>>>>>>>--<<<<<<<<<<<-------------.....----------->>>>>>>>>>>-...-------------------------------------------------------------------------------------------------------------------------------....>>>-..............
Leo_sp-2.S1199 CAAUAACAGGUUAAC--------------------CUUCACA-GGCCUGU---AAAAGUGG----------------UCG----------------------UCCGCUAGUCCA-ACGUUUUAAUCUCUGU---GAAGAAGU--CUUCUU-CU-GCCGGG-CAG----AGA---GGUGUC---------CUCGC-----------GAC-GCC-A--UACGUGGGC-AACACUACC-UGGAACAGGA-----AACGCCGGAGUAAGUCUGC-----CCA-------------GCAGCAUUGGCCGA-UCCUGUGGCGAGUCAAG-GUAACG-CUUGACCGUCGCAACGCGCG-CUA-AGGAG-UGGGUAUCGAACCC----------CUAGA-----------GGGUCGAUAUUUGAGGUACGUGCUAUCC-GCUGG---GUAA-------CCAGU---CUUAUGCGU--CAAGGCCCGGCAGGCCGAA---ACGUGUAGG--GGCACCACCCU--------------UUU------------GGGGUGGUGCU-GGC-------------------------------------------------------------------------------------------------------------------------------GUCGAAUUGCUGUGAUGCCCUU
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<----------------...----------------------.>>>>>.<<<<.-<<<<.....<<<<<<<---<<<<....-->>>>..-..-.....>->>>---->>>---<<<<<<---------.....----------->>>->>>-.--.>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<<.<.....<<<<-----...------------->>>>>.>>>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<.<<<----------.....----------->>>>>>>>>>>.......]]]]]]<<..-<<<<<---....------->>>>>---<<<<<<<<<--...<<<<.....>>>>...--->>>>>>>>>--<<<<<<<<<<<--------------...------------>>>>>>>>>>>-...-------------------------------------------------------------------------------------------------------------------------------.....>>...............
Leo_sp-3.S1199 CAAUAACAGGUUAAC--------------------CUUCACA-GGCCUGU---AAAAGUGG----------------UCG----------------------UCCGCUAGUCCA-ACGUUUUAAUCUCUGU---GAAGAAGU--CUUCUU-CU-GCCGGG-CAG----AGA---GGUGUC---------CUCGC-----------GAC-GCC-A--UACGUGGGC-AACACUACC-UGGAACAGGA-----AACGCCGGAGUAAGUCUGC-----UCA-------------GCAGCAUUGGCCGA-UCCUGUGGCGAGUCAAG-GUAACG-CUUGACCGUCGCAACGCGCG-CUA-AGGAG-UGGGUAUCGAACCC----------CUAGA-----------GGGUCGAUAUUUGAGGUACGUGCUAUCC-GCUGG---GUAA-------CCAGU---CUUAUGCGU--CAAGGCCCGGCAGGCCGAA---ACGUGUAGG--GGCACCACCCU--------------UUU------------GGGGUGGUGCU-GGC-------------------------------------------------------------------------------------------------------------------------------GUCGAAUUGCUGUGAUGCCCUU
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<----------------...----------------------.>>>>>.<<<<.-<<<<.....<<<<<<<---<<<<....-->>>>..-..-.....>->>>---->>>---<<<<<<---------.....----------->>>->>>-.--.>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<<.<.....<<<<-----...------------->>>>>.>>>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<.<<<----------.....----------->>>>>>>>>>>.......]]]]]]<<..-<<<<<---....------->>>>>---<<<<<<<<<--...<<<<.....>>>>...--->>>>>>>>>--<<<<<<<<<<<--------------...------------>>>>>>>>>>>-...-------------------------------------------------------------------------------------------------------------------------------.....>>...............
Leo_sp-5.S1199 CAAUAACAGGUUAAC--------------------CUUCACA-GGCCUGU---AAAAGUGG----------------UCG----------------------UCCGCUAGUCCA-ACGUCUUAAUCUCUGU---GAAGAAGU--CUUCUU-CU-GCCGGG-CAG----AGA---GGUGUC---------CUCGC-----------GAC-GCC-A--UACGUGGGC-AACACUACC-UGGAACAGGA-----AACGCCGGAGUAAGUCUGC-----UCA-------------GCAGCAUUGGCCGA-UCCUGUGGCGAGUCAAG-GUAACG-CUUGACCGUCGCAACGCGCG-CUA-AGGAG-UGGGUAUCGAACCC----------CGAGA-----------GGGUCGAUAUUUGAGGUACGUGCUAUCC-GCUGG---GUAA-------CCAGU---CUUAUGCGU--CAAGGCCCGGCAGGCCGAA---ACGUGUAGG--GGCACCACCCU--------------UUUG-----------GGGGUGGUGCU-GGC-------------------------------------------------------------------------------------------------------------------------------GUCGAAUUGCUGUGAUGCCCUU
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<----------------...----------------------.>>>>>.<<<<.-<<<<.....<<<<<<<---<<<<....-->>>>..-..-.....>->>>---->>>---<<<<<<---------.....----------->>>->>>-.--.>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<<.<.....<<<<-----...------------->>>>>.>>>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<.<<<----------.....----------->>>>>>>>>>>.......]]]]]]<<..-<<<<<---....------->>>>>---<<<<<<<<<--...<<<<.....>>>>...--->>>>>>>>>--<<<<<<<<<<<--------------....----------->>>>>>>>>>>-...-------------------------------------------------------------------------------------------------------------------------------.....>>...............
Leo_sp-6.S1199 CAAUAACAGGUUAAC--------------------CUUCACA-GGCCUGU---AAAAGUGG----------------UCG----------------------UCCGCUAGUCCA-ACGUUUUAAUCUCUGU---GAAGAAGU--CUUCUU-CU-GCCGGG-CAG----AGA---GGUGUC---------CUCGC-----------GAC-GCC-A--UACGUGGGC-AACACUACC-UGGAACAGGA-----AACGCCGGAGUAAGUCUGC-----UCA-------------GCAGCAUUGGCCGA-UCCUGUGGCGAGUCAAG-GUAACG-CUUGACCGUCGCAACGCGCG-CUA-AGGAG-UGGGUAUCGAACCC----------CUAGA-----------GGGUCGAUAUUUGAGGUACGUGCUAUCC-GCUGG---GUAA-------CCAGU---CUUAUGCGU--CAAGGCCCGGCAGGCCGAA---ACGUGUAGG--GGCACCACUUC-----------------G-----------GGGGUGGUGCU-GGC-------------------------------------------------------------------------------------------------------------------------------GUCGAAUUGCUGUGAUGCCCUU
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<----------------...----------------------.>>>>>.<<<<.-<<<<.....<<<<<<<---<<<<....-->>>>..-..-.....>->>>---->>>---<<<<<<---------.....----------->>>->>>-.--.>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<<.<.....<<<<-----...------------->>>>>.>>>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<.<<<----------.....----------->>>>>>>>>>>.......]]]]]]<<..-<<<<<---....------->>>>>---<<<<<<<<<--...<<<<.....>>>>...--->>>>>>>>>--<<<<<<<<<<<-----------------.----------->>>>>>>>>>>-...-------------------------------------------------------------------------------------------------------------------------------.....>>...............
Hre.S1199 CAAUAACAGGUUAAC----------------------ACACA-GGCCUGU--AAUAAGCGGG--------------CUC-GA--------------------CCCGCUAGUCCA-GCAUCUUA-UCUCCCC--AGGGGUAGCCCCCUAA---AUGUCGGG-GGG----AGA---GGUCC----------UUCG------------GGG-CU----CGAUGCGGGC-UACACUACC-UGGUACAGGG-----AACGCCGGGACCUCGC--------UCGCA----------GCGUGGUCUGGCCGA-UCCUGUGGCGAGCUCGA-GUCGCG-UCGAGCCGUCGCAACGCGCG-GAA-AGGAG-UGGGUGGUAGGUCCUUCC------UUU---------GGAAGGGCCUCCGCUUAAGGUACGUGCUAAUCCGCCGG---GAAA-------CCGGU---CCUGUAGGU--CAAGGCCCGACAAAGUCGAA--GCCUACAGG--GGGCA--------------------GUGA-----------------UGCCU-GG------UCAGUUACAGCAUCGCGAGGGCUCGCUUGGGGUUGGAAAAGCAUUAAGCAGUCUAUUUUCAGCUGCUGUCAGUGCCGACUGUACCUCCAUCGCGAGCCUUCCUGCUGGACUGA--------------AUUGCUGUGAUGCCCUU
.....<<<<<<<...----------------------.....->>>>>>>--....<<<<<<--------------...-..-------------------->>>>>>.<<<<.-<<<<<...-<<<<<<<--<<<<<......>>>>>---.......>->>>---->>>---<<<<<----------....------------>>>->>----.>>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<<.<<<.<<<--------.....---------->>>.>>>>>>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<.<<<<<<<<<<------...--------->>>>>>>>>>>>>>>.......]]]]]].<<..<<<<<---....------->>>>>---<<<<<<<<<--...<<<........>>>...-->>>>>>>>>--<<<<<--------------------....----------------->>>>>-..------<<<<<<.<<<<<....<<<<<<<<<<.<<<<<<.......<<<<..<<<<<.<<......>>>>>>>....>>>>.......>>>.>>>..>>>>>>>>>>.>>>>>>>>>>>-------------->>...............
Boc.S1199-1 CAAUAACAGGUUGAA---------------------UUCACA-GGCCUGU---AACAGUAGA-----------CCUCUNGAAAUAU----------------UCUGGUAGUCCA-ACGACUCACNUCCGUA---GGGGAAGC--CCCCUA-AAUGUCGGG-CGG----AGG---AGA--UCU-------NU------------AGA---UCUAA--UCGU-GGGC-GACACUACC-UGGUACAGGG-----GACGCCUAUCUCUGGU--------UAAC------------GCCUGAGAGGCCAA-UCCUGUGGCGAGUCUGG-GUUGCG-CCAGACCGUCGCAACGCGCG-GAA-AGGAG-UGGGCUC-----------------UUCG------------------GAGCUUAAGGUACGUGCUAAUCCCAUGG---GUAA-------CCAUG---UCUNUAUG--AAUAGGCCCGACAAGCCGAAG---CAUAGGGG--GGCAGACGGC---------------UAAG------------GCCGCCUGCU-GGACN---UCACUGUCGCGG------------------------------------------UUCG--------------------------------------------CCGCGGCGUGG-----------GAAAU-GCUGUGAUGCCCUU
.....<<<<<<<...---------------------......->>>>>>>---...<.<<<<-----------.............---------------->>>>.>.<<<<.-<<<<....<<<<<<<<---<<<<....-->>>>>.-........>->>>---->>>---<<<--<<<-------..------------>>>--->>>..-->>>>->>>>-..<<<<.<<-<...<<<<<<-----...<<<..<<<<.<<<--------....------------>>>.>>>>>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<-----------------....------------------>>>>>.......]]]]]].<<..<<<<<---....------->>>>>---<<<<<<<<--....<<<.......>>>....--->>>>>>>>--<<<<<<<<<<---------------....------------>>>>>>>>>>-.....---<<<<.<<<<<<<------------------------------------------....-------------------------------------------->>>>>>>>>>>-----------...>>-..............
Boc.S1199-2 CAAUAACAGGUUAACCU------------------AUUCACA-GGCCUGU---AACAGUAGA-----------CCUCUUGAAAUAU----------------UCUGCUAGUCCA-ACGACUCACCUCCGUA---GGGGAAGC--CCCCUA-A-UGUCGGG-CGG----AGG---AGGCCUCU-------GU------------AGAGG-UCUAA--UCGU-GGGC-GACACUACC-UGGUACAGGG-----GACGCCUAUCCCGAGU--------UAAC------------GCUCGGGAGGCCAA-UCCUGUGGCGAGUCUGG-GUUGCG-CCAGACCGUCGCAACGCGCG-GAA-AGGAG-UGGGCUC-----------------UUCG------------------GAGCUUAAGGUACGUGCUAAUCCCAUGG---GGAA-------CCAUG---CCACUAUG--ACUAGGCCCGACAAGCCGAAG---CAUAGAGG--GGCAGGCG-C---------------UGGA------------G-CGCCCGCU-GGAAC---UCACUGUCGCGG------------------------------------------UCCG--------------------------------------------CCGCGGCGUGG-----------GAAAU-GCUGUGAUGCCCUU
.....<<<<<<<.....------------------.......->>>>>>>---...<<<<<<-----------.............---------------->>>>>>.<<<<.-<<<<....<<<<<<<<---<<<<....-->>>>>.-.-......>->>>---->>>---<<<<<<<<-------..------------>>>>>->>>..-->>>>->>>>-..<<<<.<<-<...<<<<<<-----...<<<..<<<<.<<<--------....------------>>>.>>>>>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<-----------------....------------------>>>>>.......]]]]]].<<..<<<<<---....------->>>>>---<<<<<<<<--....<<<.......>>>....--->>>>>>>>--<<<<<<<<-<---------------....------------>->>>>>>>>-.....---<<<<.<<<<<<<------------------------------------------....-------------------------------------------->>>>>>>>>>>-----------...>>-..............
Caf.S1199 CAAUAACAGGUUGAC--------------------CUACACA-GGCCUGU---AACAGUGG----------GCCUCUAUGAAAAAGAUAA-------------CCGCUAGUCCA-GGCGCUUUGCUCUCGU--GGGGGAAGU--CCCCCU-U-UAUCGGG-CGA----GAG--GGCGGC----------GAGA-------------GC-CGCGU--GCGUCGGGC-AACACCACC-UGGUACAGGG-----AACGCCC-----------------AAC--------------------GGGCCGA-UCCUGUGGCGAGCCUGG-GUAACG-CCAGGCCGUCGCAACGCGCG-CUA-AGGGG-UGGGCUGGGCCU------------UCCC-------------GGGCCCGGCUUAAGGUACGUGCUAAUCCCAUGG---GAAAAAAA---CCAUG---CCGCCAUAC--GGAGCCCCGAUAAGGCAAA---GUAUG-CGG--GGCCCGGUCGCGCC-----------CGCGA---------GGCGGACCGGCU-GGU-------------------------------------------------------------------------------------------------------------------------------AGAGAAU-GCUGUGAUGCCCUU
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<----------...<<<.......>>>...------------->>>>>.<<<<.-<<<<<....<<<<<<<--<<<<<....-->>>>>.-.-......>->>>---->>>--.<<<<<----------....------------->>->>>..-->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<-----------------...-------------------->>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<<------------....------------->>>>>>>>>>.......]]]]]].<<..<<<<<---........--->>>>>---<<<.<<<<<--...<<<.......>>>...--->>>>>->>>--<<<<.<<<<.<<<<-----------.....--------->>>>>>>>>>>>-...-------------------------------------------------------------------------------------------------------------------------------.....>>-..............
Csor.S1199 CAAUAACAGGUUGAC--------------------CUACACA-GGCCUGU---AACAGUGG----------GCCUCUAUGAAAAAGAUAA-------------CCGCUAGUCCA-GACGCUUUGCUCUCGU--GGGGGGAGU--CCCCCU-U-UAUCGGG-CGA----GAG--GGCGGC----------GAGA-------------GC-CGCCU--GCGUCGGGC-AACACCACC-UGGUACAGGG-----AACGCCC-----------------AAC--------------------GGGCCGA-UCCUGUGGCGAGCCUGG-GUAACG-CCGGGCCGUCGCAACGCGCG-CUA-AGGGG-UGGGCUGGGCCU------------UCCG-------------GGGCCCGGCUUAAGGUACGUGCUAAUCCCAUGG---GAAAAAAA---CCAUG---CCAUCAUAC--GGAGCCCCGAUAAGGUAAA---GUAUGCUGG--GGCA-GGUCGCAUC-----------GAAA----------GAUCGACAGGCC-GGUA----ACCAGUAGGAUUACAUCAACACAC------------------------------AUGCA--------------------------------GUCUGUUGAUGGAAUCGCUGGU------------GAAU-GCUGUGAUGCCCUU
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<----------...<<<.......>>>...------------->>>>>.<<<<.-<<<<<....<<<<<<<--<<<<<....-->>>>>.-.-......>->>>---->>>--.<<<<<----------....------------->>->>>..-->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<-----------------...-------------------->>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<<------------....------------->>>>>>>>>>.......]]]]]].<<..<<<<<---........--->>>>>---<<<.<<<<<--...<<<.......>>>...--->>>>>.>>>--<<<.-.<<<..<<<-----------....---------->>>.>>>..>>>-....----<<<<<<..<<<<.<<<<<<<<.<<------------------------------.....-------------------------------->>.>>>>>>>>.>>>>>>>>>>------------..>>-..............
Cba.S1199-1 CAAUAACAGGUUGAC--------------------CUACACA-GGCCUGU---CACAGUGG-----------UCCUCACUAAAAUAU----------------CCGCUAGUCGA-GCGCAUUUACCUCUGUU--GGGAAAGC--UCCCUU-U-UACUGGG-CAG----AGG--AGACGGC---------CGCC------------GCC-GUCUU--UGCGUCGGC-GACACUACC-UGGUACAGGG-----GACGCCU-----------------GAAA-------------------GGGCCGA-UCCUGUGGCGAGCUCGG-GUCGCG-CCGAGCCGUCGCAACGCACG-CUA-AGGAG-UGGGCUAG----------------GAAA-----------------CUAGCUUAAGGUACGUGCUAAUCCCACGG---GCAA-------CCGUG---CUCGAUCG--AAUAGGCCCAGUAAGCCGAAG---CGAUCGGG--GCUCUUGGG----------------UAGU--------------UCCGGAGC-GG------CUUGCUGUCCCCUGGGGAAGAACGACGC----------------------------CCC--------------------------GCGUCUGUUCGAACCGGGAGGCGACAAG-------------AAU-GCUGUGAUGCCCUU
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<-----------...............---------------->>>>>.<<<<.-<<<<<....<<<<<<<<--<<<<....-->>>>..-.-.....>>->>>---->>>--.<<<<<<---------....------------>>>->>>..-->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<-----------------....------------------->>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<----------------....----------------->>>>>>.......]]]]]].<<..<<<<<---....------->>>>>---<<<<<<<<--....<<<.......>>>....--->>>>>>>>--<<<<.<<<<----------------....-------------->>>>>>>>-..------<<<<.<<<<.<<<<<....<<<<<<<<<----------------------------...-------------------------->>>>>.>>>>...>>>>>.>>>>.>>>>-------------.>>-..............
Cba.S1199-2 CAAUAACAGGUUGAC--------------------CUACACA-GGCCUGU---CACAGUGG-----------UCCUCACUAAAAUAU----------------CCGCUAGUCGA-GCGCAUUUACCUCUGUU--GGGAAAGC--UCCCUU-U-UACUGGG-CAG----AGG--AGACGGC---------CGCC------------GCC-GUCUU--UGCGUCGGC-GACACUACC-UGGUACAGGG-----GACGCCU-----------------GAAA-------------------GGGCCGA-UCCUGUGGCGAGCUCGG-GUCGCG-CCGAGCCGUCGCAACGCACG-CUA-AGGAG-UGGGCUAG----------------GAAA-----------------CUAGCUUAAGGUACGUGCUAAUCCCACGG---GCAA-------CCGUG---CUCGAUCG--AAUAGGCCCAGUAAGCCGAAG---CGAUCGGG--GCUCUUGGG----------------UAGU--------------UCCGGAGC-GG------CUUGCUGUCCCCUGGGGAAGAACGACGC----------------------------CCC--------------------------GCGUCUGUUCGAACCGGGAGGCGACAAG-------------AAU-GCUGUGAUGCCCUU
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<-----------...............---------------->>>>>.<<<<.-<<<<<....<<<<<<<<--<<<<....-->>>>..-.-.....>>->>>---->>>--.<<<<<<---------....------------>>>->>>..-->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<-----------------....------------------->>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<----------------....----------------->>>>>>.......]]]]]].<<..<<<<<---....------->>>>>---<<<<<<<<--....<<<.......>>>....--->>>>>>>>--<<<<.<<<<----------------....-------------->>>>>>>>-..------<<<<.<<<<.<<<<<....<<<<<<<<<----------------------------...-------------------------->>>>>.>>>>...>>>>>.>>>>.>>>>-------------.>>-..............
Cbr.S1199-1 CAAUAACAGGUUAAC--------------------CUACACA-GGCCUGU---CACAGUGG-----------UCCUCACUAAAAUAU----------------CCGCUAGUCGA-GCGCAUUUAUCUCUGUU--GGGAAAGC--UCCCUU-U-UAUUGGG-CAG----AGA--AGACGGC---------CGCC------------GCC-GUCUU--UGCGCCGGC-AACACUACC-UGGUACAGGG-----AACGCCU-----------------GAAA-------------------GGGCCGA-UCCUGUGGCGAGCUCGG-GUCGCG-CCGAGCCGUCGCAACGCACG-CUA-AGGAG-UGGGCUAG----------------GAAA-----------------CUGGCUUAAGGUACGUGCUAAUCCCACGG---GUAA-------CCGUG---CUCGAUCG--AAUAGGCCCAAUAAGCCGAAG---CGAUCGGG--GCUCUUGGG----------------UCAU--------------UCCGGAGC-GG------CUUGCUGUCCCCCGGGGAAGGACGACGCGG--------------------------GCC------------------------CCGCGUCUGUUCGAACUGGGAGGCGGCAAG-------------AAU-GCUGUGAUGCCCUU
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<-----------...............---------------->>>>>.<<<<.-<<<<<....<<<<<<<<--<<<<....-->>>>..-.-.....>>->>>---->>>--.<<<<<<---------....------------>>>->>>..-->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<-----------------....------------------->>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<----------------....----------------->>>>>>.......]]]]]].<<..<<<<<---....------->>>>>---<<<<<<<<--....<<<.......>>>....--->>>>>>>>--<<<<.<<<<----------------....-------------->>>>>>>>-..------<<<<.<<<<.<<<<<....<<<<<<<<<<<--------------------------...------------------------>>>>>>>.>>>>...>>>>>.>>>>.>>>>-------------.>>-..............
Cbr.S1199-2 CAAUAACAGGUUAAC--------------------CUACACA-GGCCUGU---CACAGUGG-----------UCCUCACUAAAAUAU----------------CCGCUAGUCGA-GCGCAUUUAUCUCUGUU--GGGAAAGC--UCCCUU-U-UAUUGGG-CAG----AGA--AGACGGC---------CGCC------------GCC-GUCUU--UGCGCCGGC-AACACUACC-UGGUACAGGG-----AACGCCU-----------------GAAA-------------------GGGCCGA-UCCUGUGGCGAGCUCGG-GUCGCG-CCGAGCCGUCGCAACGCACG-CUA-AGGAG-UGGGCUAG----------------GAAA-----------------CUGGCUUAAGGUACGUGCUAAUCCCACGG---GUAA-------CCGUG---CUCGAUCG--AAUAGGCCCAAUAAGCCGAAG---CGAUCGGG--GCUCUUGGG----------------UCAU--------------UCCGGAGC-GG------CUUGCUGUCCCCCGGGGAAGGACGACGCGG--------------------------GCC------------------------CCGCGUCUGUUCGAACUGGGAGGCGGCAAG-------------AAU-GCUGUGAUGCCCUU
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<-----------...............---------------->>>>>.<<<<.-<<<<<....<<<<<<<<--<<<<....-->>>>..-.-.....>>->>>---->>>--.<<<<<<---------....------------>>>->>>..-->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<-----------------....------------------->>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<----------------....----------------->>>>>>.......]]]]]].<<..<<<<<---....------->>>>>---<<<<<<<<--....<<<.......>>>....--->>>>>>>>--<<<<.<<<<----------------....-------------->>>>>>>>-..------<<<<.<<<<.<<<<<....<<<<<<<<<<<--------------------------...------------------------>>>>>>>.>>>>...>>>>>.>>>>.>>>>-------------.>>-..............
Ccocc.S1199 CAAUAACAGGUUGAC--------------------CCUCACA-GGCCUGU---CACAGUGGC----------GCCUCGUUAAACAUGA---------------CCGCUAGUCCA-GCGACUUCACCUCCGC---GGGGAAGC--CCCCAA---UGUCGGG-CGG----AGG--AGGGAACCCCC-----CCC----------GGGGGU-CCCGU--GUCGCGGGC-GACACCACC-UGGUACAGGG-----AACGCCGUCGACCCAGC-------CUCGC---------GCUGGGCGGCGGCCGA-UCCUGUGGCGAGCCCGG-GCAGCG-CCGGGCCGUCGCAACGCGCG-GAA-AGGGG-UGGGCCGGCCCGCU----------GGG-------------AGCGGGCGGCUUAAGGUACGUGCUAAUCCCGUGG---GAGA-------CCACG---CCCUCACG--GCUAGGCCCGACAAGCCGAAA---CGUGGGGG--GGCCGCGGGCGC-------------GUCU---------GCGCCCCGCGGCC---------GGCGGCGCC---------------------------------------------CUCG------------------------------------------------GGCGGCC-----------AACAC-GCUGUGAUGCCCUU
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<.----------................--------------->>>>>.<<<<.-<<<<<....<<<<<<<---<<<<....-->>>>..---......>->>>---->>>--.<<<<.<<<<<-----...---------->>>>>>->>>..-->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<<<<.<<<<<<-------.....--------->>>>>>>>>>>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<.<<<<<<<----------...------------->>>>>>>>>>>.......]]]]]].<<..<<<<<---....------->>>>>---<<<<<<<<--....<<<.......>>>....--->>>>>>>>--<<<<<<<<<<<<-------------....--------->>>.>>>>>>>>>---------<<<..<<<<---------------------------------------------....------------------------------------------------>>>>>>>-----------...>>-..............
Ccoch.S1199 CAAUAACAGGUUGAC--------------------CUUCACA-GGCCUGU---CAUAGUGG-----------GCCUCGUUAAAGAUAA---------------CCGCUAGUCCA-GCGACUUUGCCUCCGC---GGGGAAGC--CCCCGA---UGUCGGG-CGG----AGG--AGGG--CCC-------CUCG-----------GGG--CCCAU--GUCGCGGGC-GACACCACC-UGGUACAGGG-----GACGCCGAGCACCCG---------GGGA------------CGGGGGCGGGCCGA-UCCUGUGGCGAGCCUGG-GUAGCG-CCGGGCCGUCGCAACGCGCG-CAA-AGGGG-UGGGCUGAGCC-------------GCCG--------------GGCCAGCU-UGAGGUACGUGCUAAUCCCGUGG---GGAA-------CCACG---CCGCCGUG--ACUAGGCCCGACACGCCGAAG---CACGGGGG--GGCCGCGGG----------------CGAGAU-----------CCCGCGGCC---------------------------------------------------------------------------------------------------------------------------------GGCGAGAAU-GCUGUGAUGCCCUU
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<-----------................--------------->>>>>.<<<<.-<<<<<....<<<<<<<---<<<<....-->>>>..---......>->>>---->>>--.<<<--<<<-------....----------->>>-->>>..-->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<..<<.<<<<---------....------------>>>>.>>.>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<.<<<-------------....-------------->>>>>>>>-.......]]]]]].<<..<<<<<---....------->>>>>---<<<<<<<<--....<<<.......>>>....--->>>>>>>>--<<<<<<<<<----------------......----------->>>>>>>>>---------------------------------------------------------------------------------------------------------------------------------.......>>-..............
Cin.S1199 CAAUAACAGGUUGAC--------------------CAUUACA-GGCCUGU---AACAGUGG-----------GCCUCACUAAAGAUUA---------------CCGCUAGUCCA-GCGACUUUACCUCCGC---GGGGAAGC--CCCCAU---UAUCGGG-CGG----AGG---GGG--CCCU------GAAGAA--------AGGG--CCC-U--GUCGCGGGC-GACACCACC-UGGAACAGGG-----AACGCCUGAACCCU----------UGGUU------------GGGGGACGGCCGA-UCCUGUGGCGAGCCUGG-GUUGCG-CCAGGCCGUUGCAACGCGCG-CAA-AGGGG-UGGGCCU-UC--------------ACC-----------------GAAGGCUUAAGGUACGUGCUAAUCCCGUGG---GCAA-------CCACG---CCUCUGCG--ACUAGGCCCGAUAAGCCGAAG---UGCAGGGG--AGCCACGGGCGC-------------UGCG---------GCG-CCCGGGGCU-GG------GGCCUCCGCGG-------------------------------------------CGCUC-------------------------------------------UCGCGGGGGCC------------AUCU-GCUGUGAUGCCCUU
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<-----------................--------------->>>>>.<<<<.-<<<<<....<<<<<<<---<<<<....-->>>>..---......>->>>---->>>---<<<--<<<<------......-------->>>>-->>>-.-->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<....<<<<----------.....------------>>>>...>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<-<<--------------...----------------->>>>>>>.......]]]]]].<...<<<<<---....------->>>>>---<<<<<<<<--....<<<.......>>>....--->>>>>>>>--<<<<<<<<<<<<-------------....--------->>>->>>>>>>>>-..------<<<<<<<<<<<-------------------------------------------.....------------------------------------------->>>>>>>>>>>------------...>-..............
Cja.S1199 CAAUAACAGGUUGAA-------------------GCAUUACA-GGCCUGU---CAUAGUGG-----------GCCUCGUUAAAGAUUUA--------------CCGCUAGUCUA-GCGACUUUACCUCCGC---GGGGAAGC--CCCCAU---UGUCGGG-CGG----AGG---GGG--CCCU------GAGAA---------GGGG--CCC-U--GUUGCGGGC-GACACCACC-UGGAACAGGG-----AACGCCGCGAACCCU---------UCACU------------GGGGGACGGCCGA-UCCUGUGGCGAGCCUGG-GUUGCG-CCAGGCCGUCGCAACGCGCG-CAA-AGGGG-UGGGCCU-UC--------------ACC-----------------GAAGGCUUAAGGUACGUGCUAAUCCCGUGG---GUGA-------CCACG---CCGCCGCG--ACUAGGCCCGAUAUGCCGAAG---CGCGGGGG--GGCCACAGGCGC-------------UACG---------GCG-CCCGUGGCC-GG------GGCUCUCGCGG-------------------------------------------CACG--------------------------------------------CCGCGGGGGCC------------GUCU-GCUGUGAUGCCCUU
.....<<<<<<<...-------------------........->>>>>>>---...<<<<<-----------.................-------------->>>>>.<<<<.-<<<<<....<<<<<<<---<<<<....-->>>>..---......>->>>---->>>---<<<--<<<<------.....--------->>>>-->>>-.-->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<....<<<<---------.....------------>>>>..>>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<-<<--------------...----------------->>>>>>>.......]]]]]].<...<<<<<---....------->>>>>---<<<<<<<<--....<<<.......>>>....--->>>>>>>>--<<<<<<<<<<<<-------------....--------->>>->>>>>>>>>-..------<<<<<<<<<<<-------------------------------------------....-------------------------------------------->>>>>>>>>>>------------...>-..............
Cka.S1199 CAAUAACAGGUUGAAGGAGAUAGAAA---------UAUCACA-GGCCUGU---CACAGUGG-----------GAUGCCUCGCUAAACAUUGA-----------CCGCUAGUCCA-GCGACUUUACCUCCGUU--GGGGAAGCU-CCCCUU--CUGUCGGG-CGGAAU-AGG--AGGCCCUCCUGCC---GAAA-----GGAAGAGAGG-GCCUU--GUCGCGGGC-GACACCACC-UGGUACAGGG-----GACGCCGAAUCGCUCCAGC-----AGCCU--------GCUGGGCGACAGGCCAA-UCCUGUGGCGAGCUCGG-GUUGCG-CCGAGCCGUCGCAACGCGCG-CAA-AGGGG-UGGGCUGCGUCUCC----------CGCAAGA---------GGGAGCCAGCUUAAGGUACGUGCUGAUCCCAUGG---GAGAA------CCAUG---CCCCCUACA-GUGAGACCCGACAGGUCAA-GCUGUAGAGGGG--GGCCGAACCGGUA------------GAAAGGAA------UACCGGUCGGCC-UGGC----GCCC--------------------------------------------------GCGA---------------------------------------------------GGGC----------AAAGAU-GCUGUGAUGCCCUU
.....<<<<<<<..............---------.......->>>>>>>---...<<<<<-----------....................----------->>>>>.<<<<.-<<<<<....<<<<<<<<--<<<<.....->>>>..--......>>->>>...->>>--.<<<<<<<<<.<<---....----->>.>>.>>>>->>>..-->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<...<<<<.<<<<<-----.....-------->>>>>>>>>..>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<.<<<<<<----------.......--------->>>>>>>>>>>.......]]]]]].<<<.<<<<<---.....------>>>>>---<<<<<<<<<-<<..<<<<.....>>>>..->>>>>>>.>>>>--<<<<<<.<<<<<<------------........------>>>>>>>>>>>>-....----<<<<--------------------------------------------------....--------------------------------------------------->>>>----------...>>>-..............
Cmi.S1199-1 CAAUAACAGGUUAAC--------------------CUACACA-GGCCUGU---CGAAGUGGU-----------CCUCACUAAACAA----------------ACCGCUAGUCGU-GCGA-UUCGCCUCUGUU--GGGAAAGC--UCCCUU--UUAUUGGG-CAG----AGG--AGGCAGC---------AGCC------------GCU-GUCGU---UCGCCGGC-AACACUACC-UGGUACAGGG-----AAGGCCU-----------------GAGA-------------------GGGCCGA-UCCUGUGGCGAGCUGGG-GUCGCG-CCCAGCCGUCGCAACGCACG-CCA-AGGAG-UGGGCUAG----------------GAAA-----------------CUGGCUUAAGGUACGUGCUAAUCACACGG---GCAA-------CCGUG---CCCGACCG--AGUAGGCCCAAUAAGCCGAAG---CGGUCGGG--GCUCCUGGG----------------UAGU--------------UCCGGAGU-UGA-----CUGACGGCCCCCGCGGGGAAGGC-------------------------------GAGC-------------------------------GCCUGAACCGCGGCGGCCUGUCGG-------------AAU-GCUGUGAUGCCCUU
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<<-----------.............---------------->>>>>>.<<<<.-<<<<-....<<<<<<<<--<<<<....-->>>>..--......>>->>>---->>>--.<<<<<<---------....------------>>>->>>..--->>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<-----------------....------------------->>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<----------------....----------------->>>>>>.......]]]]]].<<..<<<<<---....------->>>>>---<<<<<<<<--....<<<.......>>>....--->>>>>>>>--<<<<<.<<<----------------....-------------->>>>>>>>-...-----<<<<<<<<<.<<<<<<...<<<<-------------------------------....------------------------------->>>>...>>>>>>.>>>>.>>>>>-------------.>>-..............
Cmi.S1199-2 CAAUAACAGGUUGAC--------------------CUACACA-GGCCUGU---AACAGUAG-----------UCCUCGUUAAAAUAU----------------CUGCUAGUCCAUGUAACG---UCUCUGUU--GGGGCAGU--CCCCUU--CUAUCGGG-CAG----AGA---GGAUUC---------GAAA------------GAG-UCCUA--GUUACGGGC-GACACCACC-UGGUACAGGG-----AACGCCGACCCAGGCACAUCA---GCAA--------UGAUGUACUGGAGGCCGA-UCCUGUGGCGAGCUCGG-GUCACG-CCGAGCCGUCGCAACGUGCG-GAA-AGGGG-UGGGCCAGCA--------------UAACC--------------UGCUGGCUUAAGGUACGUACUAAUCCCAUGG---GAAA-------CCAUG---CCCGUGCAG--CGAGGCCCGAUAGGCUGAU---CUGCUCGGG--GGCAGGCC-----------------ACA---------------GGCCUGCC-GG------CGUCGCCCGC--------------------------------------------GUAU--------------------------------------------GCGGGUGGACG---------AACAAAU-GCUGUGAUGCCCUU
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<-----------...............---------------->>>>>.<<<<..<<<<<.---<<<<<<<<--<<<<....-->>>>..--......>>->>>---->>>---<<<<<<---------....------------>>>->>>..-->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<...<<<<..<<<<<<---....-------->>>>>>.>>>>.>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<--------------.....-------------->>>>>>>>.......]]]]]].<<..<<<<<---....------->>>>>---<<<<.<<<<--...<<<<.....>>>>...--->>>>.>>>>--<<<<<<<<-----------------...--------------->>>>>>>>-..------<<<<<<<<<<--------------------------------------------....-------------------------------------------->>>>>>.>>>>---------.....>>-..............
Cmi.S1199-6 CAAUAACAGGUUGAC--------------------CUACACA-GGCCUGU---AACAGUAG-----------UCCUCGUUAAAAUAU----------------CUGCUAGUCCAUGUAACG---UCUCUGUU--GGGGCAGU--CCCCUU--CUAUCGGG-CAG----AGA---GGAUUC---------GAAA------------GAG-UCCUA--GUUACGGGC-GACACCACC-UGGUACAGGG-----AACGCCGACCCAGGCACAUCA---GCAA--------UGAUGUACUGGAGGCCGA-UCCUGUGGCGAGCUCGG-GUCACG-CCGAGCCGUCGCAACGUGCG-GAA-AGGGG-UGGGCCAGCA--------------UAACC--------------UGCUGGCUUAAGGUACGUACUAAUCCCAUGG---GAAA-------CCAUG---CCCGUGCAG--CGAGGCCCGAUAGGCUGAU---CUGCUCGGG--GGCAGGCC-----------------ACA---------------GGCCUGCC-GG------CGUCGCCCGC--------------------------------------------GUAU--------------------------------------------GCGGGUGGACG---------AACAAAU-GCUGUGAUGCCCUU
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<-----------...............---------------->>>>>.<<<<..<<<<<.---<<<<<<<<--<<<<....-->>>>..--......>>->>>---->>>---<<<<<<---------....------------>>>->>>..-->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<...<<<<..<<<<<<---....-------->>>>>>.>>>>.>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<--------------.....-------------->>>>>>>>.......]]]]]].<<..<<<<<---....------->>>>>---<<<<.<<<<--...<<<<.....>>>>...--->>>>.>>>>--<<<<<<<<-----------------...--------------->>>>>>>>-..------<<<<<<<<<<--------------------------------------------....-------------------------------------------->>>>>>.>>>>---------.....>>-..............
Cmi.S1199-3 CAAUAACAGGUUGAC--------------------CUACACA-GGCCUGU---AACAGUAG-----------UCCUCGUUAAAAUAU----------------CUGCUAGUCCAUGUAACG---UCUCUGUU--GGGGCAGU--CCCCUU--CUAUCGGG-CAG----AGA---GGAUUC---------GAAA------------GAG-UCCUA--GUUACGGGC-GACACCACC-UGGUACAGGG-----AACGCCGACCCAGGCACAUCA---GCAA--------UGAUGUACUGGAGGCCGA-UCCUGUGGCGAGCUCGG-GUCACG-CCGAGCCGUCGCAACGUGCG-GAA-AGGGG-UGGGCCAGCA--------------UAACC--------------UGCUGGCUUAAGGUACGUACUAAUCCCAUGG---GAAA-------CCAUG---CCCGUGCAG--CAAGGCCCGAUAGGCUGAU---CUGCACGGG--GGCAGGCC-----------------ACA---------------GGCCUGCC-GG------CGUCGCCCGC--------------------------------------------GUAU--------------------------------------------GCGGGUGGACG---------AACAAAU-GCUGUGAUGCCCUU
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<-----------...............---------------->>>>>.<<<<..<<<<<.---<<<<<<<<--<<<<....-->>>>..--......>>->>>---->>>---<<<<<<---------....------------>>>->>>..-->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<...<<<<..<<<<<<---....-------->>>>>>.>>>>.>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<--------------.....-------------->>>>>>>>.......]]]]]].<<..<<<<<---....------->>>>>---<<<<<<<<<--...<<<<.....>>>>...--->>>>>>>>>--<<<<<<<<-----------------...--------------->>>>>>>>-..------<<<<<<<<<<--------------------------------------------....-------------------------------------------->>>>>>.>>>>---------.....>>-..............
Cmi.S1199-4 CAAUAACAGGUUGAC--------------------CUACACA-GGCCUGU---AACAGUAG-----------UCCUCGUUAAAAUAU----------------CUGCUAGUCCAUGUAACG---UCUCUGUU--GGGGCAGU--CCCCUU--CUAUCGGG-CAG----AGA---GGAUUC---------GAAA------------GAG-UCCUA--GUUACGGGC-GACACCACC-UGGUACAGGG-----AACGCCGACCCAGGCACAUCA---GCAA--------UGAUGUACUGGAGGCCGA-UCCUGUGGCGAGCUCGG-GUCACG-CCGAGCCGUCGCAACGUGCG-GAA-AGGGG-UGGGCCAGCA--------------UAACC--------------UGCUGGCUUAAGGUACGUACUAAUCCCAUGG---GAAA-------CCAUG---CCCGUGCAG--CAAGGCCCGAUAGGCUGAU---CUGCACGGG--GGCAGGCC-----------------ACA---------------GGCCUGCC-GG------CGUCGCCCGC--------------------------------------------GUAU--------------------------------------------GCGGGUGGACG---------AACAAAU-GCUGUGAUGCCCUU
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<-----------...............---------------->>>>>.<<<<..<<<<<.---<<<<<<<<--<<<<....-->>>>..--......>>->>>---->>>---<<<<<<---------....------------>>>->>>..-->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<...<<<<..<<<<<<---....-------->>>>>>.>>>>.>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<--------------.....-------------->>>>>>>>.......]]]]]].<<..<<<<<---....------->>>>>---<<<<<<<<<--...<<<<.....>>>>...--->>>>>>>>>--<<<<<<<<-----------------...--------------->>>>>>>>-..------<<<<<<<<<<--------------------------------------------....-------------------------------------------->>>>>>.>>>>---------.....>>-..............
Cmi.S1199-5 CAAUAACAGGUUGAC--------------------CUACACA-GGCCUGU---AACAGUAG-----------UCCUCGUUAAAAUAU----------------CUGCUAGUCCAUGUAACG---UCUCUGUU--GGGGCAGU--CCCCUU--CUAUCGGG-CAG----AGA---GGAUUC---------GAAA------------GAG-UCCUA--GUUACGGGC-GACACCACC-UGGUACAGGG-----AACGCCGACCCAGGCACAUCA---GCAA--------UGAUGUACUGGAGGCCGA-UCCUGUGGCGAGCUCGG-GUCACG-CCGAGCCGUCGCAACGUGCG-GAA-AGGGG-UGGGCCAGCA--------------UAACC--------------UGCUGGCUUAAGGUACGUACUAAUCCCAUGG---GAAA-------CCAUG---CCCGUGCAG--CAAGGCCCGAUAGGCUGAU---CUGCACGGG--GGCAGGCC-----------------ACA---------------GGCCUGCC-GG------CGUCGCCCGC--------------------------------------------GUAU--------------------------------------------GCGGGUGGACG---------AACAAAU-GCUGUGAUGCCCUU
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<-----------...............---------------->>>>>.<<<<..<<<<<.---<<<<<<<<--<<<<....-->>>>..--......>>->>>---->>>---<<<<<<---------....------------>>>->>>..-->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<...<<<<..<<<<<<---....-------->>>>>>.>>>>.>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<--------------.....-------------->>>>>>>>.......]]]]]].<<..<<<<<---....------->>>>>---<<<<<<<<<--...<<<<.....>>>>...--->>>>>>>>>--<<<<<<<<-----------------...--------------->>>>>>>>-..------<<<<<<<<<<--------------------------------------------....-------------------------------------------->>>>>>.>>>>---------.....>>-..............
Cparad.S1199 CAAUAACAGGUUGAAG-------------------UAUUACA-GGCCUGU---AAUAGUGG-----------GCCUCAUUAAAGAUUA---------------CUGCUAGUCUA-GCGACUUUACCUCCGC---GGGGAAGC--CCCC-A--UUAUCGGG-CGG----AGG---GGGCCCU--------GAAA-----------AGGG-CCCU---GUUGCGGGC-GACACCACC-UGGAACAGGG-----AACGCCGCAAACCCU---------UUACU-----------GGGGGAACGGCCGA-UCCUGUGGCGAGCCUGG-GUUGCG-CCAGGCCGUUGCAACGCGCG-CAA-AGGGG-UGGGCCUUC---------------ACU-----------------GAAGGCUUAAGGUACGUGCUAAUCCCGUGG---GCAA-------CCACG---CCUCUGCA--ACUAGGCCCGAUAAGCCGAAG---UGCAGCGG--GGCCACAGGCGC-------------CACAGC--------GCGCCUGUAGCU-GG------GGCUUCUACAGC------------------------------------------GUAU-------------------------------------------GCUGUAGAAGCC------------AUUU-GCUGUGAUGCCCUU
.....<<<<<<<....-------------------.......->>>>>>>---...<<<<<-----------................--------------->>>>>.<<<<.-<<<<<....<<<<<<<---<<<<....-->>>>-.--.......>->>>---->>>---<<<<<<<--------....----------->>>>->>>.--->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<....<<<<---------.....----------->>>>...>>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<---------------...----------------->>>>>>>.......]]]]]].<...<<<<<---....------->>>>>---<<.<<<<<--....<<<.......>>>....--->>>>>.>>--<<<<<<<<<<<<-------------......-------->>>>>>>>>>>>-..------<<<<<<<<<<<<------------------------------------------....------------------------------------------->>>>>>>>>>>>------------...>-..............
Cpro.S1199 CAAUAACAGGUUGGCGGGAUAUGCCACAACA----UAUCACA-GGCCUGU---CACAGUAG-------AGAAGCCUCGUUAAACAUUUUUGA-----------CUGCUAGUCCA-GCGACUUUACCUCCGUU--GGGGAAGCU-CCCCUG--CUGUCGGG-CGG--AAAGG---GGGCCCU--------UUAG-----------GGGG-CCU--U-GUCGCGGGC-GACACCACC-UGGUACAGGG-----AACGCCA-----------------UAAC-------------------UGGCCGA-UCCUGUGGCGAGCUCGG-GUUGCG-CCGAGCCGUCGCAACGCGCG-CUA-AGGGG-UGGGCUGCGCC-------------UACG---------------GGCCGGCUUAAGGUACGUGCUAAUCCCAUGGGAAUGAAAGAAAAACCAUG---CCCUCGCAG-U-GAGGCCCGACAGGUCAA--GCUGCGCAGGG--GGCGAACCGCCC-------------UUCGA----------GGGCGGGCGCC-GGCG----CUCGAUCGAACCGC----------------------------------------AAC------------------------------------------GCGGUCCGGGAGAG--------GAAAAACU-GCUGUGAUGCCCUU
.....<<<<<<<...................----.......->>>>>>>---...<<<<<-------........................----------->>>>>.<<<<.-<<<<<....<<<<<<<<--<<<<.....->>>>..--......>>->>>--..>>>---<<<<<<<--------....----------->>>>->>>--.->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<-----------------....------------------->>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<.<<<-------------....--------------->>>>>>>>.......]]]]]].<<..<<<<<..............>>>>>---<<<<<<<<<-<-..<<<<.....>>>>..-->>>>>>.>>>>--<<<<..<<<<<<-------------.....---------->>>>>>.>>>>-....----<<<..<<<.<<<<<----------------------------------------...------------------------------------------>>>>>.>>>..>>>--------.....>.>-..............
Cpru.S1199 CAAUAACAGGUUGAC--------------------CUACACA-GGCCUGU---CACAGUGG-----------UCCUCGUUAAAAUAU----------------CUGCUAGUCGU-GCGA-UUUACCCCUGUU--GGGACAGC--UCCCUC--UUAUUGGG-CAG----GGG--AGGCAGC---------AGCC------------GCU-GCC-GU--UCGCCGGC-GACACUACC-UGGUACAGGG-----AACGCCU-----------------GAAA-------------------GGGCCGA-UCCUGUGGCGAGCUCGG-GUCGCG-CCGAGCCGUCGCAACGCGCG-GAA-AGGAG-UGGGCCAG----------------GAAA-----------------CUGGCUUGAGGUACGUGCUAAUCACACGG---GUAA-------CCGUG---CCCGACCG--AAAAGGCCCAAUAAGCCGAGG---CGGUCGGG--GCUCUUGGG----------------UAGU--------------UCCGGAGUUGAA-----CUGUCAGCCCCUGGGGAGGGACGGCGUGG-------------------------AGC-----------------------------CCACGCCCGCCCGAGCCGGGGGCGCAG-------------AAU-GCUGUGAUGCCCUU
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<-----------...............---------------->>>>>.<<<<.-<<<<-....<<<<<<<<--<<<<....-->>>>..--......>>->>>---->>>--.<<<<<<---------....------------>>>->>>-..-->>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<-----------------....------------------->>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<----------------....----------------->>>>>>.......]]]]]].<<..<<<<<---....------->>>>>---<<<<<<<<--....<<<.......>>>....--->>>>>>>>--<<<<<.<<<----------------....-------------->>>>>>>>....-----<<<<..<<<<<<<<...<<<..<<<<<<<-------------------------...----------------------------->>>>>>>..>>>...>>>>>>>>>>>>-------------.>>-..............
Cram.S1199 CAAUAACAGGUUGAAGGAGAUUGAAA---------UAUCACA-GGCCUGU---CAUAGUGG--------GACGCCUCGUUAAACAUUGA--------------CCGCUAGUCCA-GCGACUUUACCUCCGUU--GGGGAAGCU-CCCCUA--CUGUCGGG-CGGAAUUAGG--AGGCCCUCCUGUC---GAA-------GGCAAGAGG-GCCUU--GUCGCGGGC-GACACCACC-UGGUACAGGG-----GACGCCGAACCGCUCAGC------AGGCC--------GCUGAGCGGCAGGCCGA-UCCUGUGGCGAGCUCGG-GUUGCG-CCGAGCCGUCGCAACGCGCG-CAA-AGGGG-UGGGCUGCGUCUCCU---------ACACG-----------AGGAGCCAGCUUAAGGUACGUGCUAAUCCCAUGG---GGAA-------CCAUG---CCGCUGCAG-U-GAGGCCCGACAGGCCGA---GCUGCAGAGG--AGGCGGUCGGUG-------------GAAGGAAAAAGUACACCGGUCGGCCU-GGC-----GCCC--------------------------------------------------GCGA---------------------------------------------------GGGC-----------AAGAU-GCUGUGAUGCCCUU
.....<<<<<<<..............---------.......->>>>>>>---...<<<<<--------....................-------------->>>>>.<<<<.-<<<<<....<<<<<<<<--<<<<.....->>>>..--......>>->>>....>>>--.<<<<<<<.<<<<---...------->>>>.>>>>->>>..-->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<...<<<<<<<<<------.....-------->>>>>>>>>..>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<.<.<<<<<---------.....----------->>>>>>>>>>>.......]]]]]].<<<.<<<<<---....------->>>>>---<<.<<<<<<-<-..<<<<.....>>>>..--->>>>>>>.>>--<<<<<<<<<<<<-------------.............>>>>>>>>.>>>>-...-----<<<<--------------------------------------------------....--------------------------------------------------->>>>-----------..>>>-..............
Csob.S1199 CAAUAACAGGUUGACG-------------------CGUCUCA-GGCCUGU---CACAGUGG-----------ACCUCAGUAAAUAUGA---------------CCGCUAGUCUA-GCGACUUUACCUCCGU---GGGGAAGC--CCCCG---UUGUCGGG-CGG----AGG--GGGCGCUCCUU-----CUUGCC------GAGGGGC-GCC-GU-GUCGCAGGC-GACACCACC-UGGUACAGGG-----GACGCCGGC---------------CCA------------------GCCGGCCGA-UCCUGUGGCGAGCCUAG-GUAGCG-CUAGGCCGUCGCAACGCGCG-CAA-AGGGG-UGGGCC------------------UCCG-------------------GGCUUAAGGUACGUGCUAAUCCCGUGG---GAAGGAGAAA-CCACG---CUCCCGCA--ACUAGGCCCGACGAGCCGAAG---UGCGGGGG--GGGCCGGGGCCGC------------UAC-----------GCGCGCCGGGCC-GGU--------------------------------------------------------------------------------------------------------------------------------AGAAAU-GCUGUGAUGCCCUU
.....<<<<<<<....-------------------.......->>>>>>>---...<<<<<-----------................--------------->>>>>.<<<<.-<<<<<....<<<<<<<---<<<<....-->>>>.---.......>->>>---->>>--.<<<<<<<<<<-----......------>>>>>>>->>>-..->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<<<---------------...------------------>>>>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<------------------....------------------->>>>.......]]]]]].<<..<<<<<---..........->>>>>---<<<<<<<<--....<<<.......>>>....--->>>>>>>>--<<.<<<<.<<.<<------------...----------->>>>.>>>>.>>-...--------------------------------------------------------------------------------------------------------------------------------....>>-..............
Co_sp-2.S1199 CAAUAACAGGUUGAC--------------------CUACACA-GGCCUGU---CACAGUGG-----------UCCUCACUAAAAUAU----------------CCGCUAGUCGA-GCGCAUUUACCUCUGUU--GGGAAAGC--UCCCUU-U-UACUGGG-CAG----AGG--AGACGGC---------CGCC------------GCC-GUCUU--UGCGUCGGC-GACACUACC-UGGUACAGGG-----GACGCCU-----------------GAAA-------------------GGGCCGA-UCCUGUGGCGAGCUCGG-GUCGCG-CCGAGCCGUCGCAACGCACG-CUA-AGGAG-UGGGCUAG----------------GAAA-----------------CUAGCUUAAGGUACGUGCUAAUCCCACGG---GCAA-------CCGUG---CUCGAUCG--AAUAGGCCCAGUAAGCCGAAG---CGAUCGGG--GCUCUUGGG----------------UAGU--------------UCCGGAGC-GG------CUUGCUGUCCCCUGGGGAAGAACGACGC----------------------------CCC--------------------------GCGUCUGUUCGAACCGGGAGGCGACAAG-------------AAU-GCUGUGAUGCCCUU
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<-----------...............---------------->>>>>.<<<<.-<<<<<....<<<<<<<<--<<<<....-->>>>..-.-.....>>->>>---->>>--.<<<<<<---------....------------>>>->>>..-->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<-----------------....------------------->>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<----------------....----------------->>>>>>.......]]]]]].<<..<<<<<---....------->>>>>---<<<<<<<<--....<<<.......>>>....--->>>>>>>>--<<<<.<<<<----------------....-------------->>>>>>>>-..------<<<<.<<<<.<<<<<....<<<<<<<<<----------------------------...-------------------------->>>>>.>>>>...>>>>>.>>>>.>>>>-------------.>>-..............
Co_sp-3.S1199 CAAUAACAGGUUGAC--------------------CUACACA-GGCCUGU---AACAGUGG-----------UCCUCACUAAAAUAU----------------CCGCUAGUCGAUGCGCAUUCAUCUCUGUU--GGGAGAGC--UCCCUU--UUAUUGGG-CAG----AGA---AGGCGGCC-------ACG-----------GGCUG-CUU--U-UGCGCCGGC-AACACUACC-UGGUACAGGG-----AACGCCC-----------------GUCA-------------------GGGCCGA-UCCUGUGGCGAGCUCGG-GUCGCG-CCGAGCCGUCGCAACGCACG-CUA-AGGAG-UGGGCUGGGAA-------------GCUU--------------UUCCCGGCUUAAGGUACGUGCUAAUCCCACAG---GCAA-------CUGUG---CCCGACCG--AAUAGGCCCAAUAAGCCGAAG---CGGUCGGG--GCUCUUGGG----------------UAAU--------------UCCAGAGC-GGG-----CUGUCCUCCUC-------------------------------------------CCC---------------------------------------------GGGGGGGGCAG------------AAAU-GCUGUGAUGCCCUU
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<-----------...............---------------->>>>>.<<<<..<<<<<....<<<<<<<<--<<<<....-->>>>..--......>>->>>---->>>---<<<<<<<<-------...----------->>>>>->>>--.->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<-----------------....------------------->>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<-------------....-------------->>>>>>>>>.......]]]]]].<<..<<<<<---....------->>>>>---<<<<<<<<--....<<<.......>>>....--->>>>>>>>--<<<<<.<<<----------------....-------------->>>>>>>>-...-----<<<<<<<<<<<-------------------------------------------...--------------------------------------------->>>>>>>>>>>------------..>>-..............
Cta.S1199 CAAUAACAGGUUAAC--------------------CUACACA-GGCCUGU---AACAGUGG-----------GCCUCGUUAAAGAUAA---------------CUACUAGUCCA-GUCACG-C-UCUCCGU---GGGGAAGU--CCCC-A-UCUAUCGGA-CGG----AGG---GGGCUC---------UCGA------------GAG-CCCUA--GUGUCGGGC-GACACCACC-UUGAACAGGG-----AACGCUGAUCCGGGGCACCG----UACG--------CGGUGCGCUGGAGGCCGA-UCCUGUGGCGAGCUCGG-GUAACG-CCGAGCCGUCGCAACGUGCG-GUU-GGGGG-UGGGCUGGCA--------------GCCAA--------------UGCCGGCUUAAUGUACGUACUAGCC-CACGG---GAAA-------CCGUG---CCCGCGCAG-U-GAGGCCCGAUAGGUCAAGCU--CGCACGGG--GGCCGGCCGACG-------------CGA-----------CGUCGGCCGGCCGGGU--------------------------------------------------------------------------------------------------------------------------------UCAACU-GCUGUGAUGCCCUU
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<-----------................--------------->>>>>.<<<<.-<<<<<.-.-<<<<<<<---<<<<....-->>>>-.-........>->>>---->>>---<<<<<<---------....------------>>>->>>..-->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<..<<<<<.<<<<<<----....-------->>>>>>.>>>>>>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<--------------.....-------------->>>>>>>>.......]]]]]]<<..-<<<<<---....------->>>>>---<<<<.<<<<-<-..<<<.......>>>..>>>--.>>.>>>>--<<<<<<<<<<<<-------------...----------->>>>>>>>>>>>....--------------------------------------------------------------------------------------------------------------------------------....>>-..............
Cya.S1199 CAAUAACAGGUUGACG-------------------CAUCUCA-GGCCUGU---CACAGUGG-----------GCCUCGUUAAAUAUGA---------------CCGCUAGUCCA-GCGACUUUACCUCCGC---GGGGAAGC--CCCCGU--U-GUCGGG-CGG----AGG---GGGCGCGCCUC----CUUGCU-----GAGGGGCG-CCCU---GUCGCGGGC-GACACCACC-UGGUACAGGG-----GACGCCGGC---------------GCC------------------GCCGGCCGA-UCCUGUGGCGAGCCUGG-GUAGCG-CCAGGCCGUUGCAACGCGCG-CAA-AGGGG-UGGGCC------------------UCCG-------------------GGCUUAAGGUACGUGCUAAUCCCGUGG---GAAGAAGAAA-CCACG---CCCCCGCA--ACAAGGCCCGACAAGCCGAAG----UGCGGGGU-GGCCCGGGGCGC-------------UACG----------GCGCGCCGGGCC-GGU----------------------------------------------------------------------------------------------------------------------------------AACU-GCUGUGAUGCCCUU
.....<<<<<<<....-------------------.......->>>>>>>---...<<<<<-----------................--------------->>>>>.<<<<.-<<<<<....<<<<<<<---<<<<....-->>>>..--.-.....>->>>---->>>---<<<<<<.<<<<----......----->>>>.>>>->>>.--->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<<<---------------...------------------>>>>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<------------------....------------------->>>>.......]]]]]].<<..<<<<<---..........->>>>>---.<<<<<<<--....<<<.......>>>....---->>>>>>>.-<<<<<<<.<<<<-------------....---------->>>>.>>>>>>>-...----------------------------------------------------------------------------------------------------------------------------------.>.>-..............
Ety.S1199-1 CAAUAACAGGUUGAC--------------------CUACACA-GGCCUGU---AACAGUGG----------GCCUCUGGAAAAAAAGAUAA------------CCGCUAGUCCA-GUCACUUUGCUCUCGC--GGGGGAAGU--CCCCCU--UUAUCGGG-CGA----GGG--AGCAGCGUC-------GUCC----------GGCGC-UGCU-U-GUUUCGGGC-AACACCACC-UGGUACAGGG-----AACGCCC-----------------AAC--------------------GGGCCGA-UCCUGUGGCGAGCCUGG-GUAACG-CCAGGCCGUCGCAACGCGCG-CUA-AGGGG-UGGGCUAAGCC-------------UCCG---------------GGCUGGCUUAAGGUACGUGCUAAUCCCAUGG---GAAAAAAA---CCAUG---CCUUCAUAU--GGAGCCCCGAUAAGGCAAA---GUAUGUUGG--GGCGCCUCGA---------------GAGA------------UCGGGGCGCU-GG------UCCCGCCGGCUCGCAGGCGAUCAUCCC-CCCGGG--------------------CCUCC--------------------------CCCGGGCGGGCGCUCGCGGGCCGCGGGA------------GAAU-GCUGUGAUGCCCUU
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<----------...<<<........>>>...------------>>>>>.<<<<.-<..<<....<<<<<<<--<<<<<....-->>>>>.--.......>->>>---->>>--<<<<<<<<<-------....---------->>>>>->>>>-.->>..>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<-----------------...-------------------->>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<.<<<-------------....--------------->>>>>>>>.......]]]]]].<<..<<<<<---........--->>>>>---<<..<<<<<--...<<<.......>>>...--->>>>>..>>--<<<<<<<<<<---------------....------------>>>>>>>>>>-..------<<<<<<.<<<<<<<..<<<.....<<<-<<<<<<--------------------.....-------------------------->>>>>>.>>>>>>..>>>>>>>>>>>>>------------..>>-..............
Ety.S1199-2 CAAUAACAGGUUGAC--------------------CUACACA-GGCCUGU---AACAGUGG----------GCCUCUGGAAAAA-AGAUAA------------CCGCUAGUCCA-GUUACUUUGCUCUCGC--GGGGGAAGU--CCCCCU--UUAUCGGG-CGA----GGG--AGCAGCGUC-------GUCC----------GGCGC-UGCU-U-GUUUCGGGC-AACACCACC-UGGUACAGGG-----AACGCCC-----------------AAC--------------------GGGCCGA-UCCUGUGGCGAGCCUGG-GUAACG-CCAGGCCGUCGCAACGCGCG-CUA-AGGGG-UGGGCUAAGCC-------------UCCG---------------GGCUGGCUUAAGGUACGUGCUAAUCCCAUGG---GAAAAAAA---CCAUG---CCUUCAUAU--GGAGCCCCGAUAAGGCAAA---GUAUGUUGG--GGCGCCUCGA---------------GAGA------------UCGGGGCGCU-GG------UCCCGCCGGCUCGCAGGCGAUCAUCCCCCCCGGG--------------------CCUCC--------------------------CCCGGGCGGGCGCUCGCGGGCCGCGGGA------------GAAU-GCUGUGAUGCCCUU
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<----------...<<<.......->>>...------------>>>>>.<<<<.-<<<<<....<<<<<<<--<<<<<....-->>>>>.--.......>->>>---->>>--<<<<<<<<<-------....---------->>>>>->>>>-.->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<-----------------...-------------------->>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<.<<<-------------....--------------->>>>>>>>.......]]]]]].<<..<<<<<---........--->>>>>---<<..<<<<<--...<<<.......>>>...--->>>>>..>>--<<<<<<<<<<---------------....------------>>>>>>>>>>-..------<<<<<<.<<<<<<<..<<<.....<<<.<<<<<<--------------------.....-------------------------->>>>>>.>>>>>>..>>>>>>>>>>>>>------------..>>-..............
To_fl.S1199 CAAUAACAGGUUGAC--------------------CUACACA-GGCCUGU---CACAGUAG------------UCCUCGUUAAAAUAU---------------CUGCUAGUCCAUGUAGCGU---CUCUGC---GGGGAAGC--CCCCUA--CUAUCGGG-CAG----AG----GGGACCC--------GAGA-----------GGGU-CCC-A--GUUACGGGC-AACACCACC-UGGUACAGGG-----GACGCCGACCCAGGCACGUCG---GAGA--------CGAUGUCCUGGAGGCCAA-UCCUGUGGCGAGCUCGG-GUCGCG-CCGAGCCGUCGCAACGUGCG-GAA-AGGGG-UGGGCUGGCAU-------------UCC---------------AUGCCGGCUUAAGGUACGUACUAAUCCCAUGG---GAAA-------CCAUG---CCCGUGCAG--CGAGGCCCGAUAGGCUAAC---CUGCACGGG--AGCCGACCGGAC-------------CUGGC--------GUCCAUCUCGGCU-GG------GUCCUCCUGCGGCGGCA-------------------------------------CCUG----------------------------------------UGCCCUGCAGGGGAC----------GGAAAU-GCUGUGAUGCCCUU
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<------------...............--------------->>>>>.<<<<..<<<<<..---<<<<<<---<<<<....-->>>>..--.......>->>>---->>----<<<<<<<--------....----------->>>>->>>-.-->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<...<<<<<.<<<<<<---....-------->>>>>>>>>>>.>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<-------------...--------------->>>>>>>>>.......]]]]]].<<..<<<<<---....------->>>>>---<<<<<<<<<--...<<<<.....>>>>...--->>>>>>>>>--<<<<<<..<<<<-------------.....-------->>>>...>>>>>>-..------<<<<.<<<<<<<.<<<<-------------------------------------....---------------------------------------->>>>>>>>>>>>>>>----------....>>-..............
Mfl.S1199 -AAUAACAGGUUGAC--------------------CUACACA-GGCCUGU---AACAGUGG-------GCCUCAAGUAAAGAAAAAUGAAAAAAAUAAA----CCGCUAGUCCA-GUAACUUUACCUCCGU--AGGGGAAGUC-CCCCUA-UUUAUCGGG-CGG----GGG--AGCACGCGGGGUGGUUGAACAAACCCCCCCGCCGU-CGCUU--GUUUCGGGC-AACACCACC-UGGUACAGGG-----AACGCC------------------UGAAG-------------------GGCCGA-UCCUGUGGCGAGCUCGG-GUAACG-CCGAGCCGUCGCAACGCGCG-CUA-AGGGG-UGGGCUAAGCC-------------UCCGG--------------GGCUGGCUUAAGGUACGUGCUAAUCCCAUGG---GACAAAAA---CCAUG---CCUUCAUAC--GGAGCCCCGGUAAGGCAAA---GUAUGUUGG--GGCGUCUCCGA--------------GAGAGA----------UCGGAGCGCU-GGUC----CUCGCAGGUUUCACACCACAUCUA------------------------------CGUCCUGA----------------------------UAGAUGUGGUUGCGGACUGUGAG------------AAAU-GCUGUGAUGCCCU-
-....<<<<<<<...--------------------.......->>>>>>>---...<<<<<-------...<<<............>>>..........---->>>>>.<<<<.-<.<<<....<<<<<<<--<<<<<.....->>>>>.-........>->>>---->>>--<<<<<<<<<<<.<<<<.....>>>>.>>>>>.>>>-.>>>.-->>>.>>>>>-..<<<<.<<-<...<<<<<<-----...<<<------------------.....------------------->>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<.<<<-------------.....-------------->>>>>>>>.......]]]]]].<<..<<<<<---........--->>>>>---<<..<<<<<--...<<<.......>>>...--->>>>>..>>--<<<<.<<<<<<--------------......---------->>>>>>>>>>-....----<<<<<<<..<<<.<<<<<<<<<<<------------------------------........---------------------------->>>>>>>>>.>>.>>>>>>>>>>------------..>>-.............-
Nun.S1199 CAAUAACAGGUUGAC--------------------CUACACA-GGCCUGU---AACAGUGG----------GCCUCUGGAAGAAAAGAUAA------------CCGCUAGUCCA-GUUACUUUGCUCUCGC--GGGGGAAGU--CCCCCU--UUAUCGGG-CGA----GGG--AGCAGC----------CUCC-------------GC-UGCUU--GUUUCGGGC-AACACCACC-UGGUACAGGG-----AACGCCC-----------------AAC--------------------GGGCCGA-UCCUGUGGCGAGCCUGG-GUAACG-CCAGGCCGUCGCAACGCGCG-CUA-AGGGG-UGGGCUAAGCC-------------UCCG---------------GGCUGGCUUAAGGUACGUGCUAAUCCCAUGG---GAAAAAAAA--CCAUG---CCUUCAUAU--GGAGCCCCGAUAAGGCAAA---GUAUGUUGG--GGCGCCCCGA---------------GAGA------------UCGGGGCGCU-GG------UCCCGCCGGCUCGCAGGCGAUCAUCCCCCGGGG---------------------CCUC--------------------------CCCCGGGCGGGCGCUCGCGGGCCGCGGGA------------GAAU-GCUGUGAUGCCCUU
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<----------...<<<........>>>...------------>>>>>.<<<<.-<..<<....<<<<<<<--<<<<<....-->>>>>.--.......>->>>---->>>--<<<<<<----------....------------->>->>>>.-->>..>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<-----------------...-------------------->>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<.<<<<-------------....--------------->>>>>>>>.......]]]]]].<<..<<<<<---.........-->>>>>---<<..<<<<<--...<<<.......>>>...--->>>>>..>>--<<<<<<<<<<---------------....------------>>>>>>>>>>-..------<<<<<<.<<<<<<<..<<<....<<<<<<<<<<---------------------....-------------------------->>>>>>>.>>>>>>..>>>>>>>>>>>>>------------..>>-..............
Tin.S1199-1 CAAUAACAGGUUGAC--------------------CAUUACA-GGCCUGU---AACAGUGG----------GCCUC-AUUAA---AGAUUA------------CUGCUAGUCCA-GCGACUUUACCUCCGC---GGGGAAGC--CCCCAU---UAUCGGG-CGG----AGG--GGGCCCU---------GAGAA-----------AGG-GCCCU--GUCGCGGGC-GACACCACC-UGGAACAGGG-----AACGCCUGAACCCU----------UCAUU------------GGGGGACGGCCGA-UCCUGUGGCGAGCCUGG-GUUGCG-CCAGGCCGUUGCAACGCGCG-CAA-AGGGG-UGGGCCUCC---------------ACU-----------------GGAGGCUUAAGGUACGUGCUAAUUCCGUGG---GAAA-------CCACG---CCCCCGUA--ACUAGGCCCGAUAAGCCGAAG---UGCGGGGG--GGCUACGGGCGC-------------CACG----------GCGCCUGUAGCU-GG------GGCUUUUACAACAAGGGGGUGAUUUCAG--------------------------UUCA------------------------CUGAAGUCACCGCCGAGUAUAUUGUAAAGCC------------AUCU-GCUGUGAUGCCCUU
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<----------...<<-.....---.>>...------------>>>>>.<<<<.-<<<<<....<<<<<<<---<<<<....-->>>>..---......>->>>---->>>--<<<<<<<---------.....----------->>>->>>>.-->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<.<..<<<<----------.....------------>>>>..>>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<---------------...----------------->>>>>>>.......]]]]]].<...<<<<<---....------->>>>>---<<<<<<<<--....<<<.......>>>....--->>>>>>>>--<<<<<<<<<<<<-------------....---------->>>>>>>>>>>>-..------<<<<<<.<<<<<..<<.<<<<<<<<<<<--------------------------....------------------------>>>>>>>>>>>.>>..>>....>>>>>>>>>------------...>-..............
Hpa.S1199 --AUAACAGGUUAAC--------------------CUUCACA-GGCCUGU---AACAGUGG----------GCCUC-GUUAA---AGAUUA------------CUGCUAGUCCA-GCGAUUUGACCUCUGU--AGGGGAAGU--CCCCAA--CUGUCGGG-CAG----AGG--AGGCUC----------UGAAG------------GA-GCCU-GUAUCGCGGGC-GACACCACC-UGGUACAGGG-----AACGCCUCUCC-------------UCAC----------------GGAAGGCCGA-UCCUGUGGCGAGCCUGG-GUAACG-CCAGGCCGUCGCAACGCGCG-CAA-AGGGG-UGGGCCAUGUC-------------UUGUUC-------------GACUGGCUUAAGGUACGUGCUAAUCCCAUGG---GAAA-------CCAUG---CCUUCUCA--AUAAGGCCCGACAGGCCAAGG---UGAGAAGG--GGCAGCCGGCG--------------UCCU-----------CGCCAGCUGCU-GG------GCUCC-------------------------------------------------AACUAC------------------------------------------------GGAGC---------AUGAAAU-GCUGUGAUGCCCUU
--...<<<<<<<...--------------------.......->>>>>>>---...<<<<<----------...<<-.....---.>>...------------>>>>>.<<<<.-<<<<<....<<<<<<<--.<<<<....-->>>>..--.......>->>>---->>>--<<<<<<----------.....------------>>->>>>-..>>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<.<<<-------------....---------------->>>>>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<.<<<-------------......------------->>>>>>>>.......]]]]]].<<..<<<<<---....------->>>>>---<<<<<<<<--....<<<<.....>>>>....--->>>>>>>>--<<<<<<.<<<<--------------....----------->>>>.>>>>>>-..------<<<<<-------------------------------------------------......------------------------------------------------>>>>>---------.....>>-..............
Bhy.S1199 -----ACAGGUUACC--------------------CUUCACAAGGCCUGU--AACAAGUUAA----------CCCUCGUUAAAUAAUU---------------UUGCUAGUCCA-GCGACUUUACCUCUGC---GGGGAAGC--CCCCUA--CUGUCG-G-CGG----AG---AGGCC-----------UACG--------------G-GCCUU--GUUGCGGGC-GACACCACC-UGGUACAGGG-----GACGCCUAGCUGC-----------CUUU---------------GCAGCGGCCGA-UCCUGUGGCGAGCCUGA-GUAGCG-UCAGGCCGUCGCAACGCGCG-GAA-AGGGG-UGGGCUUGC---------------UAUC----------------GCAGGCUUGAGGGACGUGCUAAUU-CCACGG--GAAA------CCGUGG---CCGCUGGG--AGUAGGCCCGACAGGCCAAAG---CCCAGCGG--GGUGCCUAGC---------------UUC-------------GCUAGGCGCU-AG------GUCUCAUCGCAACAGCUC------------------------------------CUCGC-------------------------------------GGGCUGUGCUUUGGGAC-------------AAU-GCUGUGAUG-----
-----<<<<<<<...--------------------........>>>>>>>--....<<<.<<----------................--------------->>>>>.<<<<.-<<<<<.....<<<<<<---<<<<....-->>>>..--......->->>>---->>---<<<<<-----------....-------------->->>>>.-->>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<..<<<<<-----------....--------------->>>>>>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<---------------....---------------->>>>>>>.......]]]]]].<<<-<<<<<<--....------>>>>>>---<<<<<<<<--....<<<<.....>>>>....--->>>>>>>>--<<<<<<<<<<---------------...------------->>>>>>>>>>-..------<<<<<<..<<<.<<<<<<------------------------------------.....------------------------------------->>>>>>>>>..>>>>>>------------->>>-.........-----
Fso-1.S1199 CAAUAACAGGUUAAC----------------------ACACA-GGCCUGU---AACAGUGG----------GCCUCUAU-GAAAAAGAUAA------------CCGCUAGUCCA-GCACUUUA-CCUCCGU--AGGGGAAGC--CCCCAA--CUAUCGGG-CGG----AGG--AGGCAC----------CUCG-------------GU-GCC--GU-GUGCGGGC-GACACCACC-UGGUACAGGG-----AACGCC------------------UACG--------------------GGCCGA-UCCUGUGGCGAGUCUGG-GUAGCU-CCAGGCCGUCGCAACGCGCG-CUA-AGGGG-UGGGCUGGUCUCC-----------CUUC------------GGGGGCCAGCUUAAGGUACGUGCUAAUCCCACGG---GUAA-------CCGUG---CUCCCUCAU--GGAGGCCCGAUAGGCCAAA---GUGUUGGAG--GGCGCCCUCAUGAG----------CUCUACC-----GCUCAUGGGCGCGCU-GGU-----GCCUCGCCGCAGCGUCCGCUGCAGCGCGUGAUGACCCCC---------------CCGC-----------GGGGGAUGCGGAACGCGCUGGAGACGCUGAGCCACGGGCGGGGC----------UUAACU-GCUGUGAUGCCCUU
.....<<<<<<<...----------------------.....->>>>>>>---...<<<<<----------...<<<..-.....>>>...------------>>>>>.<<<<.-<<<<....-<<<<<<<--.<<<<....-->>>>..--.......>->>>---->>>--.<<<<<----------....------------->>->>>--..->>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<------------------....-------------------->>>...->>>>>><<<<.<<<<<<-<....>->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<<<-----------....------------>>>>>>>>>>>.......]]]]]]<<<..<<<<<---....------->>>>>---<<<<..<<<--...<<<<.....>>>>...--->>>..>>>>--<<<<<.<<<<<<<<----------<......----->>>>>>>>>.>>>>>-...-----<<<<<<<<<<<<<<<<<....<<<<<<<<..<<.<<<<<---------------....----------->>>>>...>>..>>>>>>>>>.>>>>>>>.....>.>>>>>>>>----------...>>>-..............
Fso-2.S1199-2 CAAUAACAGGUUAAC----------------------ACACA-GGCCUGU---AACAGUGG----------GCCUCUAU-AAAAAAGAUAA------------CCGCUAGUCCA-GCACUUUA-CCUCCGU--AGGGGAAGC--CCCCAA--CUAUCGGG-CGG----AGG--AGGCAC----------UCAG-------------AU-GCC--GU-GUGCGGGC-AACACCACC-UGGAACAGGG-----AACGCC------------------UACG--------------------GGCCGA-UCCUGUGGCGAGCCUGG-GUAGCU-CCAGGCCGUCGCAACGCGCG-CUA-AGGGG-UGGGCUGGUCUCC-----------CUUC------------GGGGGCCGGCUUAAGGUACGUGCUAAUCCCACGG---GAAA-------CCGUG---CUCCCUCAU--GGAGGCCCGAUAGGCCAAA---GUGUUGGAG--GGUGCCGCUGGGAG----------CUUCAGG-----GCUCUCGGCUGCGCU-GGU-----GCUUCGCUGCAGCGUCCGCUGCAGGGCGGGACAACCCCC---------------U--C-----------GGGGGACGUGGACCGCCCGCG-GACGCUGAGCCAC-GGCGAGGC----------UUAACU-GCUGUGAUGC----
.....<<<<<<<...----------------------.....->>>>>>>---...<<<<<----------...<<<..-.....>>>...------------>>>>>.<<<<.-<<<<....-<<<<<<<--.<<<<....-->>>>..--.......>->>>---->>>--.<<<<<----------....------------->>->>>--..->>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<------------------....-------------------->>>...->>>>>><<<<.<<<<<<-<....>->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<<<-----------....------------>>>>>>>>>>>.......]]]]]]<<<..<<<<<---....------->>>>>---<<<<..<<<--...<<<<.....>>>>...--->>>..>>>>--<<<<<.<<<<<<<<----------<......----->>>>>>>>>.>>>>>-...-----<<<<<<<<<<<<<<<<<....<<<<<<<<..<<.<<<<<---------------.--.----------->>>>>...>>..>>>>>>>>>->>>>>>>.....>->>>>>>>>----------...>>>-..........----
Fso-2.S1199-1 CAAUAACAGGUUAAC----------------------ACACA-GGCCUGU---AACAGUGG----------GCCUCUAU-AAAAAAGAUAA------------CCGCUAGUCCA-GCACUUUA-CCUCCGU--AGGGGAAGC--CCCCAA--CUAUCGGG-CGG----AGG--AGGCAC----------UCAG-------------AU-GCC--GU-GUGCGGGC-AACACCACC-UGGAACAGGG-----AACGCC------------------UACG--------------------GGCCGA-UCCUGUGGCGAGCCUGG-GUAGCU-CCAGGCCGUCGCAACGCGCG-CUA-AGGGG-UGGGCUGGUCUCC-----------CUUC------------GGGGGCCGGCUUAAGGUACGUGCUAAUCCCACGG---GAAA-------CCGUG---CUCCCUCAU--GGAGGCCCGAUAGGCCAAA---GUGUUGGAG--GGUGCCGCUGGGAG----------CUUCAGG-----GCUCUCGGCUGCGCU-GGU-----GCUUCGCUGCAGCGUCCGCUGCAGGGCGGGACAACCCCC---------------U--C-----------GGGGGACGUGGACCGCCCGCG-GACGCUGAGCCAC-GGCGAGGC----------UUAAUU-GCUGUGAUGC----
.....<<<<<<<...----------------------.....->>>>>>>---...<<<<<----------...<<<..-.....>>>...------------>>>>>.<<<<.-<<<<....-<<<<<<<--.<<<<....-->>>>..--.......>->>>---->>>--.<<<<<----------....------------->>->>>--..->>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<------------------....-------------------->>>...->>>>>><<<<.<<<<<<-<....>->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<<<-----------....------------>>>>>>>>>>>.......]]]]]]<<<..<<<<<---....------->>>>>---<<<<..<<<--...<<<<.....>>>>...--->>>..>>>>--<<<<<.<<<<<<<<----------<......----->>>>>>>>>.>>>>>-...-----<<<<<<<<<<<<<<<<<....<<<<<<<<..<<.<<<<<---------------.--.----------->>>>>...>>..>>>>>>>>>->>>>>>>.....>->>>>>>>>----------...>>>-..........----
Fph.S1199-1 CAAUAACAGGUUAAC----------------------ACACA-GGCCUGU---AGAAGUGG----------GCCUCAUU-AAAA-AGAUAA------------CCGCUAGUCCA-ACACUUUA-CCUCCGU--AGGGGAAGC--CCCCAG--CUAUCGGG-CGG----AGG--AGGCAC----------UCA--------------GU-GCC--GU-GUGUGGGC-AACACUACC-UGGAACAGGG-----AACGCC------------------UACG--------------------GGCCGA-UCCUGUGGCGAGUCUGA-GUAGCU-UCAGACCGUCGCAACGCGCG-CUA-AGGAG-UGGGCUGGUCUUC-----------CUGC------------GAAGGCCAGCUUAAGGUACGUGCUAAUCCCAUGG---GUAA-------CCAUG---CUCUCUCAC--GGAGGCCCGAUAGGCCAAA---GUGUUAGGG--GGCGCCGCCGUGAG----------CUUCA--------CUCACGGCCGCGCU-GGU----U-CUUCGCUGCGGCGGCCGCUACAGGGCGAGACAACCCCC---------------UUCU-----------GGGGGACGUGGAUCGCCCGCG-GCCGCCGAGCCAC-AGCGAGGU----------CUAAUU-GCUGUGAUGCCCUU
.....<<<<<<<...----------------------.....->>>>>>>---...<<<<<----------...<<<..-....->>>...------------>>>>>.<<<<.-<<<<....-<<<<<<<--.<<<<....-->>>>..--.......>->>>---->>>--.<<<<<----------...-------------->>->>>--..->>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<------------------....-------------------->>>...->>>>>><<<<.<<<<<<-<....>->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<<<-----------....------------>>>>>>>>>>>.......]]]]]]<<<..<<<<<---....------->>>>>---<<<<..<<<--...<<<<.....>>>>...--->>>..>>>>--<<<<<.<<<<<<<<----------.....-------->>>>>>>>.>>>>>-...----.-<<<<<<<<<<<<<<<<....<<<<<<<<..<<.<<<<<---------------....----------->>>>>...>>..>>>>>>>>>->>>>>>>.....>->>>>>>>.----------...>>>-..............
Fph.S1199-2 CAAUAACAGGUUAAC----------------------ACACA-GGCCUGU---AGAAGUGG----------GCCUCAUU-AAAA-AGAUAA------------CCGCUAGUCCA-ACACUUUA-CCUCCGU--AGGGGAAGC--CCCCAG--CUAUCGGG-CGG----AGG--AGGCAC----------UCA--------------GU-GCC--GU-GUGUGGGC-AACACUACC-UGGAACAGGG-----AACGCC------------------UACG--------------------GGCCGA-UCCUGUGGCGAGUCUGA-GUAGCU-UCAGACCGUCGCAACGCGCG-CUA-AGGAG-UGGGCUGGUCUUC-----------CUGC------------GAAGGCCAGCUUAAGGUACGUGCUAAUCCCAUGG---GUAA-------CCAUG---CUCUCUCAC--GGAGGCCCGAUAGGCCAAA---GUGUUAGGG--GGCGCCGCCGUGAG----------CUUCA--------CUCACGGCCGCGCU-GGU----U-CUUCGCUGCGGCGGCCGCUACAGGGCGAGACAACCCCC---------------UUCU-----------GGGGGACGUGGAUCGCCCGCG-GCCGCCGAGCCAC-AGCGAGGU----------CUAAUU-GCUGUGAUGCCCU-
.....<<<<<<<...----------------------.....->>>>>>>---...<<<<<----------...<<<..-....->>>...------------>>>>>.<<<<.-<<<<....-<<<<<<<--.<<<<....-->>>>..--.......>->>>---->>>--.<<<<<----------...-------------->>->>>--..->>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<------------------....-------------------->>>...->>>>>><<<<.<<<<<<-<....>->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<<<-----------....------------>>>>>>>>>>>.......]]]]]]<<<..<<<<<---....------->>>>>---<<<<..<<<--...<<<<.....>>>>...--->>>..>>>>--<<<<<.<<<<<<<<----------.....-------->>>>>>>>.>>>>>-...----.-<<<<<<<<<<<<<<<<....<<<<<<<<..<<.<<<<<---------------....----------->>>>>...>>..>>>>>>>>>->>>>>>>.....>->>>>>>>.----------...>>>-.............-
Fso-3.S1199-1 CAAUAACAGGUUAAC----------------------ACACA-GGCCUGU---AACAGUGG----------GCCUCUAU-GAAAAAGAUAA------------CCGCUAGUCCA-GUACUUUA-CCUCCGU--AGGGGAAGC--CCCCAA--CUAUCGGG-CGG----AGG--AGGCAC----------UUCG-------------GU-GCC--GU-GUGCGGGC-GACACCACC-UGGUACAGGG-----AACGCC------------------UACG--------------------GGUCGA-UCCUGUGGCGAGUCUGG-GUAGCU-CCAGGCCGUCGCAACGCGCG-CUA-AGGGG-UGGGCUGGUCUCC-----------CUUC------------GGGGGCCAGCUUAAGGUACGUGCUAAUCCCACGG---GUAA-------CCGUG---CUCCCUCAC--AGAGGCCCGAUAGGCCAAA---GUGUUGGAG--GGCGCCCUCAUGAG----------UUUCACC-----GCUCAUGGGCGCGCU-GGU-----UCUUUGUUACGGCAUUCAGAAUUACA----------------------------UUCAC-----------------------------UGUAUGCUGGUUGAUAUAACAAAGA----------UUAAUU-GCUGUGAUGCCCUU
.....<<<<<<<...----------------------.....->>>>>>>---...<<<<<----------...<<<..-.....>>>...------------>>>>>.<<<<.-<<<<....-<<<<<<<--.<<<<....-->>>>..--.......>->>>---->>>--.<<<<<----------....------------->>->>>--..->>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<------------------....-------------------->>>...->>>>>><<<<.<<<<<<-<....>->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<<<-----------....------------>>>>>>>>>>>.......]]]]]]<<<..<<<<<---....------->>>>>---<<<<..<<<--...<<<<.....>>>>...--->>>..>>>>--<<<<<.<<<<<<<<----------<......----->>>>>>>>>.>>>>>-...-----<<<<<<<<<...<<..<<<...<<<<----------------------------.....----------------------------->>>>..>>>..>>...>>>>>>>>>----------...>>>-..............
Fso-3.S1199-2 CAAUAACAGGUUAAC----------------------ACACA-GGCCUGU---AACAGUGG----------GCCUCUAU-GAAAAAGAUAA------------CCGCUAGUCCA-GUACUUUA-CCUCCGU--AGGGGAAGC--CCCCAA--CUAUCGGG-CGG----AGG--AGGCAC----------UUCG-------------GU-GCC--GU-GUGCGGGC-GACACCACC-UGGUACAGGG-----AACGCC------------------UACG--------------------GGUCGA-UCCUGUGGCGAGUCUGG-GUAGCU-CCAGGCCGUCGCAACGCGCG-CUA-AGGGG-UGGGCUGGUCUCC-----------CUUC------------GGGGGCCAGCUUAAGGUACGUGCUAAUCCCACGG---GUAA-------CCGUG---CUCCCUCAC--AGAGGCCCGAUAGGCCAAA---GUGUUGGAG--GGCGCCCUCAUGAG----------UUUCACC-----GCUCAUGGGCGCGCU-GGU-----UCUUUGUUACGGCAUUCAGAAUUACA----------------------------UUCAC-----------------------------UGUAUGCUGGUUGAUAUAACAAAGA----------UUAAUU-GCUGUGAUGCCCUU
.....<<<<<<<...----------------------.....->>>>>>>---...<<<<<----------...<<<..-.....>>>...------------>>>>>.<<<<.-<<<<....-<<<<<<<--.<<<<....-->>>>..--.......>->>>---->>>--.<<<<<----------....------------->>->>>--..->>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<------------------....-------------------->>>...->>>>>><<<<.<<<<<<-<....>->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<<<-----------....------------>>>>>>>>>>>.......]]]]]]<<<..<<<<<---....------->>>>>---<<<<..<<<--...<<<<.....>>>>...--->>>..>>>>--<<<<<.<<<<<<<<----------<......----->>>>>>>>>.>>>>>-...-----<<<<<<<<<...<<..<<<...<<<<----------------------------.....----------------------------->>>>..>>>..>>...>>>>>>>>>----------...>>>-..............
Nga.S1199-1 ---UAACAGGUUGACC--------------------UUCACA-GGCCUGU---CAAAGUGGGCCUC-----------AUUAAA---------------GAUAACUGCUAGUCUA-GAGACUUUACCUCCGUA--GGUGAACC----CCCCGAGUAUCGGG-CGG----AGG--AGGCU-----------UUCG-------------AGCCU-G--UGUCUCAGGC-AACACCACC-UGGAACAGGG-----AACGCC------------------UACG--------------------GGCCGA-UCCUGUGGCGAGCCUGG-GCAGCG-CCAGGCCGUCGCAACGCGCG-CUA-AGGGG-UGGGCUGGUCCUUC----------CGUC------------GAAGGUCAGCUUAAGGUACGUGCUAAUCCCAUGG---GAUAA------CCAUG---CUCCCUCAC-GGAGG-CCCGAUA-GGCC-AAAGUGUUGG-AG--GCGUCUCGCAUUGA----------GCCCUCGCG--GGGCUCAUGCGGGCGC----------------------------------------------------------------------------------------------------------------------------GCUGGCGUUUCGACUGCUGUGAUGCCCUU
---..<<<<<<<....--------------------......->>>>>>>---...<<<<<...<<-----------......--------------->>...>>>>>.<<<<.-<<<<<....<<<<<<<.--<<.<....---->.>>.........>->>>---->>>--<<<<<-----------....------------->>>>>-.--.>>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<------------------....-------------------->>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<.<<<<<----------....------------>>>>>>>>>>>.......]]]]]].<<<.<<<<<---.....------>>>>>---<<<<..<<<-...<<-<<.....->>>>-...>>>..>>->>--<<<<<.<<<<<.<<----------<<<<.....-->>>>>>>>>>>>>>>>----------------------------------------------------------------------------------------------------------------------------...........>>>...............
Nga.S1199-2 CAAUAACAGGUUGACC--------------------UACACA-GGCCUGU---AACAGUGGGCCUC-----------AUUAAAAAA------------GAUAACCGCUAGUCCA-GCAUCUUUACCUUCGUA--GGGGAAGU----CCCCAACUAUCGGG-CGA----AGGA-GGCAGC----------UCU-------------GCUGUC--GU--GUGCGGGC-AACACCACC-UGGUACAGGG-----AACGCC------------------UACG---------------------GGCCGAUCCUGUGGCGAGUCUGG-GUAACG-CCAGACCGUCGCAACGCGCG-CUA-AGGGG-UGGGCUGG-CCUUC----------CGUC------------GAAGGCCGGCUUAAGGUACGUGCUAAUCCCAUGG---GACAA------CCAUG---CUCCCUCACGGAGG-CCCGAUAG-GCC--AAAGUGUUGG-AGG-GCGCCCUCACGUGG-----------CCUCAGCU----UCACGUGGGCGCGCCGGCGU-802nt----------------------------------------------------------------------------------------------------------------------------AU-ACUGUGAUGCCCUU
.....<<<<<<<....--------------------......->>>>>>>---...<<<<<...<<-----------.........------------>>...>>>>>.<<<<.-<<<<.....<<<<<<<.--<<<<....---->>>>.........>->>>---->>>.-<<<<<<----------...------------->>>>>>--..-->>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<------------------....--------------------->>>...>>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<-<<<<<----------....------------>>>>>>>>>>>.......]]]]]].<<..<<<<<---.....------>>>>>---<<<<..<<<...<<-<<.....>->>>--...>>>..>>->>.-<<<<.<<<<<<<<<-----------........---->>>>>>>>>.>>>>......-~~~~---------------------------------------------------------------------------------------------------------------------------->>-..............-
Gba.S1199 CAAUAACAGGUUAAC---------------------UUCACA-GGCCUGU---AACAGUGG----------GCCUCCUU-AA---AGAUAA------------CUGCUAGUCCA-ACGUCUUCAUCUCCUU--GGGGGAAGC--CCCCCG--UUAUCGGG-AGG----AGACCCGGCGCGCC-------ACAGG----------GGCC-GCCGUGUGGCGUGGGC-GACACUACC-UGGUACAGGG-----AACGCCGGACCGCACCCC------UCG-----------GGGGGCGGUUGGCCGA-UCCUGUGGCGAGCUCGA-GUCGCG-UCGAGCCGUCGCAACGCGCG-GAA-AGGAG-UGGGCUGUAC--------------GCUU---------------GUACGGCUUAAGGUACGUGCUAAUCCCUUGG---GAAA-------CCAAGCCCCUGCUGCU----GAGACCCGAUAAGUCGA------GGCGCAGA-AGGGGGCGUAGGGC-----------CUGCGCC-------GCCCGUCCCCCU-GG------CCUGUCCCCGCUCUC---------------------------------------CCCCCG------------------------------------GAGAGCCGCGCGGCAGG------------GUCU-GCUGUGAUGCC---
.....<<<<<<<...---------------------......->>>>>>>---...<<<<<----------...<<...-..---.>>...------------>>>>>.<<<<.-<<<<<....<<<<<<<--<<<<<....-->>>>>.--.......>->>>---->>>..<<<<<.<<<-------.....---------->>>>->>>>...>>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<.<<<<<.<<<<------...----------->>>>>>>>>>>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<--------------....--------------->>>>>>>>.......]]]]]]<<.<.<<<<<---....------->>>>>...<<<<.<<<----..<<<.......>>>..------>>>>>>>.-<<<<<<....<<<<-----------.......------->>>>..>>>>>>-..------<<<<<<...<<<<<<---------------------------------------......------------------------------------>>>>>>.....>>>>>>------------>.>>-...........---
Gpe.S1199 CAAUAACAGGUUAAC---------------------CUCACA-GGCCUGU---AACAGUGG----------GCCUCCUU-AA---AGAUAA------------CUGCUAGUCCA-ACGUCUUCAUCUCCUU--GGGGGAAGC--CCCCCG--CUAUCGGG-AGG----NNNNCNGCGUGCCCC------GGG-----------GGGCC-GCCGUGUGGCGUGGGC-GACAGUACCAUGGUACAGG------AACGGCGGACC-UGCCCU------UCA-----------GUGGGCGGUUGGCCGA-UCCUGUGGCGAGCUCGA-GUCGCG-UCGAGCCGUCGCAACGCGCG-GAA-AGGAG-UGGGCUGUAC--------------GCUU---------------GUACGGCUUAAGGUACGUGCUAAUCCCUUGG---GAAA-------CCAAGC--CUCUGACGC-U-GAGACCCGAUAGGUCGA----AGCGUUGAGG-GGGUCUGCGGGG-------------UUCUACAUC-----CCCCGCAGGCCU-GGC-----CCUGCUACGUUCUUGGUAGCCAGUU-----------------------------AUC--------------------------------AACUGGCGAGCAAGGACGGGCAGG------------AACU-GCUGUGAUGC----
.....<<<<<<<...---------------------......->>>>>>>---...<<<<<----------...<<...-..---.>>...------------>>>>>.<<<<.-<<<<<....<<<<<<<--<<<<<....-->>>>>.--.......>->>>---->>>..<<<<<.<<<<------...----------->>>>>->>>>...>>>>>>>>>-..<<<<.<<.<...<<<<<<------..<<<<.<<<-<.<<<<------...----------->>>>>.>>>>>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<--------------....--------------->>>>>>>>.......]]]]]]<<<..<<<<<---....------->>>>>.--<<<.<<<<<-<-..<<<<.....>>>>..---->>>>>>>>>.-<<<<<<<<<<<<-------------.........----->>>>>>>>>>>>-...-----<<<<<<.<<<<<<<<...<<<<<<<-----------------------------...-------------------------------->>>>>>>...>>>>>>>>>>>>>>------------.>>>-..........----
Pam.S1199 CAAUAACAGGUCAACG-------------------CAUCGCA-GGCCUGU---AAUAGUUUA------------------AA-------------------UAACGCUAGUCC--GCUG---------------------------------GAUUUA-----------------------------------------------------------CAGCGGGC-GACACUACC-UUGUACAGGG-----GACGCAGUGCUC------------GUCUUGG------------GAGUCUGCCAA-UCCUGUGGCGAGCCC----UUU-----GGGCCGUCGCAACGCGCG-C-A-GGGAG-UGGGCUGGGGCU------------UAUU-------------GGCUCCGGCUUAAGAUACGUGCUAAGCUACUGGGU-GAAA------ACCAGG---CUUCGCG---------CUUAAAAA-----------CGCGGAGG-AUUUC--------------------GUGACGAACUUA---------GAAAU-------------------------------------------------------------------------------------------------------------------------------------AGACU-GCUGUGAUGCCCUU
.....<<<<<<<....-------------------.......->>>>>>>---...<<<<<<------------------..------------------->>>.>>>.<<<<--<<<<---------------------------------......----------------------------------------------------------->>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<.<<<<------------.......------------>>>>>>>>...->>>>>><<<<.<<<<----...----->>>>>>>>...[.[[[[[-.-.->>>>>->><<<<<<<<<<------------....------------->>>>>>>>>>.......]]]]]].<<...<<<<.<-....------>>>>>.---<<<<<<<---------........----------->>>>>>>.-<<<<<--------------------............--------->>>>>-------------------------------------------------------------------------------------------------------------------------------------...>>-..............
Aac.S1199 -----ACAGGUUAACCU------------------AUUCACA-GGCCUGU---CAAAGUAAA--------------CUU-GA---------------------UUGCUAGUCU--GCUGAG-------------------------------UCAC-----------------------------------------------------------UUCAGUGGGC-GACAUU-CC-UGGAACAGAG-----GACAUCAGCUCU------------GAAACAU-------------GACUGGUCAA-UUCUGUGGCGAGCUC----GUAA---GAGUCCGUCGCAACGCACG-CUA-AGGAA-UGGGUCUCUCUUG-----------GAAA-------------CAAGGGGACUUGAGGUACGUGCUAAUCCCUUGCA--GCCAA-----UGCAAG---CCUCUGCAG------G-UC-ACA----------CUGUAGGGG--UUGACACACCA--------------AAUAC-----------UGGCAGUCAA-GGU------------------------------------------------------------------------------------------------------------------------------AUAAAAAU-GCUGUGAUG-----
-----<<<<<<<.....------------------.......->>>>>>>---...<<<<<.--------------...-..--------------------->>>>>.<<<<--<<<<<<-------------------------------....----------------------------------------------------------->>>>>>>>>>-..<<<<-<<-<...<<<<<<-----...<<<<<.<<.------------.......------------->>>>>>>...->>>>>><<<<.<<<<----....--->>>.>>>>>...[.[[[[[-...->>>>>->><<<<<<.<<<<-----------....------------->>>>>>>>>>.......]]]]]].<<..<<<<<<--.....----->>>>>>---<<<<<<<<<------.-..-...---------->>>>>>>>>--<<<<<...<<<--------------.....----------->>>..>>>>>-...------------------------------------------------------------------------------------------------------------------------------......>>-.........-----
Cparas.S1199 CAAUAACAGGUUAAC--------------------AUUCACA-GGCCUGU---AAAAGUAG-----------ACCUCAUUAAAUA---------------UUACUGCUAGUCGAUGCAUCGU--UCUCCGC---GGGGAAGC--CCCC--AUUUAUCGGG-CGG----AGA--UAUGCUGAAGCAUCUGAUUA-----CAGUGCUCAGUGUA---AGAUGCCGGC-GACACCACC-UGGUACAGGG-----GACGCCUCGCGGUUU---------CCA---------------AACCGAAGGCCAAUCCUGUGGCGAGCUCGG-GUCGCG-CUGAGCCGUCGCAACGCGCG-CUA-AGGGG-UGGGCUAGUCC-------------UGCG--------------GGGCUGGCUUAAGGUACGUGCUAAUCCACCGC---GAAAA------GCGGU---CUCGUGUGA-GAAGACCCGAUAA-GUCGAG---UCACACGGG--GGCUUCUGACAG-------------UGAU---------UUGUCGUGGGGCU-GGUAC-AGUGGG--------------------------------------------------159nt------------------------------------------------CCCACU----------CAACAU-GCUGUGAUGCCCU-
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<-----------.............---------------...>>>>>.<<<<..<<<<<..--<<<<<<<---<<<<....-->>>>--.........>->>>---->>>--<<<<<<<<.<<<.<<<....----->>>>>>>>>>>>>>---.>>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<..<<<<<.---------...--------------->>>>>.>>>>...>>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<-------------....-------------->>>>>>>>>.......]]]]]].<<..<<<<<---.....------>>>>>---<<<<<<<<<-...<<<.......->>>...--->>>>>>>>>--<<<<<<<<<<<<-------------....--------->>>>>>.>>>>>>-.....-<<<<<<--------------------------------------------------~~~~~------------------------------------------------>>>>>>----------....>>-.............-
Crad.S1199 CAAUAACAGGUUAAC--------------------AUUCACA-GGCCUGU---AAAAGUAG-----------ACCUCAUUAAAUA---------------UUACUGCUAGUCGAUGCAUCGU--UCUCCGC---GGGGAAGC--CCCC--AUUUAUCGGG-CGG----AGA--UAUGCUGAAGCAUCUGAUUA-----CAGUGCUCAGUGUA---AGAUGCCGGC-GACACCACC-UGGUACAGGG-----GACGCCUCGCGGUUU---------CCA---------------AACCGAAGGCCAAUCCUGUGGCGAGCUCGG-GUCGCG-CUGAGCCGUCGCAACGCGCG-CUA-AGGGG-UGGGCUAGUCC-------------UGCG--------------GGGCUGGCUUAAGGUACGUGCUAAUCCACCGC---GAAAA------GCGGU---CUCGUGUGA-GAAGACCCGAUAA-GUCGAG---UCACACGGG--GGCUUCUGACAG-------------UGAU---------UUGUCGUGGGGCU-GGUAC-AGUGGG--------------------------------------------------159nt------------------------------------------------CCCACU----------CAACAU-GCUGUGAUGCCCU-
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<-----------.............---------------...>>>>>.<<<<..<<<<<..--<<<<<<<---<<<<....-->>>>--.........>->>>---->>>--<<<<<<<<.<<<.<<<....----->>>>>>>>>>>>>>---.>>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<..<<<<<.---------...--------------->>>>>.>>>>...>>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<-------------....-------------->>>>>>>>>.......]]]]]].<<..<<<<<---.....------>>>>>---<<<<<<<<<-...<<<.......->>>...--->>>>>>>>>--<<<<<<<<<<<<-------------....--------->>>>>>.>>>>>>-.....-<<<<<<--------------------------------------------------~~~~~------------------------------------------------>>>>>>----------....>>-.............-
Lci.S1199 CAAUAACAGGUUAACC-------------------UUUCACA-GGCCUGU---AAAAGUUAGU-------------UUU-GU--------------------ACUGCUAGUCU--GCC----------------------------------AUCCC-------------------------------------------------------------GGCAGGC-GACACCACC-GUGAUCAGGG-----AACGCUGCA---------------GCGA-----------------UGCAGCCGA-UCCUGAGGCGAGCCU----UCAC----AGGCCGUCGCAACGCGCG-CA--UGGGG-UGGGCUGCACAU------------GGACA-----------AUGUGUCGGCUUAAGGUACGUGCUAAUCCUUCGG---GCAA-------CCGAA---CCGUUGGCG-AUGAGGCCCCCGCGGCCGA---GUCCCAGUGG--GACCUGCAGUGUC------------UGC-----------GACACGCGGGUCNGGA-----ACGGGUUUUCCGG-----------------------------------------GCAA--------------------------------------------CCGAGACCUGU-----------AAAAU-GCUGUGAUGCCCUU
.....<<<<<<<....-------------------.......->>>>>>>---...<<<.<<<-------------...-..-------------------->>>>>>.<<<<--<<<----------------------------------.....------------------------------------------------------------->>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<<<---------------....----------------->>>>>>...->>>>>><<<<.<<<<----....---->>>>>>>>...[.[[[[[-..-->>>>>->><<<<<<<<<<------------.....----------->>>>>.>>>>>.......]]]]]].<<..<<<<<---....------->>>>>---<<<<<<<.<-<<..<<<<.....>>>>..--->>>>>>>>>>--<<<<<<<.<<<<<------------...----------->>>>>>>>>>>>....-----<<<<<<<<..<<<-----------------------------------------....-------------------------------------------->>>>>>>>>>>-----------...>>-..............
Chy.S1199 -----ACAGGUUAAC---------------------UUCACA-GGCCUGU---AACAGUGG-----------GCCUCAUUAAAGAUAA---------------CUGCUAGUCCA-GCACCUUUAUCUCCCU---GGGGAAGC--CCCC--UAUUAUCGGG-AGG----AGA--CGCGCUGUGGCCU---UUCC-------AGGCAGAGCGUG---UGGUGCGGGC-AACACUACC-UGGUACAGGG-----AACGCCGGAGCCCCU---------CUAGU----------AGGGUUGCUUGGCCGAUCCUGUGGCGAGCCCGA-GUAGCG-UCGGGCCGUCGCAACGCGCG-CAA-AGGAG-UGGGCUG-----------------CAAGU-----------------CAGCUUAAGGUACGUGCUAAUCCCUUGG---GUAA-------CCAAG---CUUCAACGCCGA-GAUCCGAUAA-GUCAA---GGCGCUGAGG--GGGCGAGAUGUCA------------GGUA---------UGACAUCUUGCCU-GG----UCUGUUACA-----------------------------------------------269nt---------------------------------------------UGUAACAGA----------AGAAAU-GCUGUGAUGCCCU-
-----<<<<<<<...---------------------......->>>>>>>---...<<<<<-----------...<<......>>...--------------->>>>>.<<<<.-<<<<<....<<<.<<<---<<<<....-->>>>--..........->>>---->>>--<<<<<<.<<.<<<---....------->>>>>.>>>>>>---.>>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<.<<<<<<<---------.....---------->>>>..>>>>>>>...>>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<-----------------.....----------------->>>>>.......]]]]]].<<..<<<<<---....------->>>>>---<<<<<.<<<<..-<<<.......->>>..--->>>>.>>>>>--<<<<<<<<<<<<<------------....--------->>>>>>>>>>>>>-..----<<<<<<<<<-----------------------------------------------~~~~~--------------------------------------------->>>>>>>>>----------....>>-.............-
Xpo.S1199 CAAUAACAGGUUAACGAUAUGUUAUAUA-------UAUCACA-GGCCUGU---AAUAGUAGU---------UUUAGUGGGGUU-------------UUUAUACUGCUA-GUCUA-GCACUUUUAUUCUCUU--AGGGGUAG---CCCCA--AAUAUCGGG-AGA----GAA--AGCAAG----------GCAA-------------CU-UGU--GUAGUGCGGGC-GACACCAGC-UGGUACAGGGGAUCUGACGCCUAUAUAUAGAGCUAUAGAGUUU---UUUAUAGUUAUUUUAUAGGUAUG-CCCUGUGGCGAGUCCAG-GUUGCG-CUGGACCGUUGCAACGCGCG-CAA-AGCGG-UGGGCUAUAUAUAU----------AUAU-----------AUAUAUAUGGCUUAAGGUACGUGCUAAUCCCUUGA---GAAA-------UCAAG---UCCCUAUA--AUUAGAC-CGAUAUGUCGAAG---UGUAGGGA--GGUUGUAG-----------------UUA---------------CUAUAACU-GGUAA---AAUACUAGACGGUAGU--------------------------------------GCUUUGAAUAUUG-----------------------------AUAAUUGAUCUAGUAUU---------AAAAAAU-GCUGUGAUGCCCUU
.....<<<<<<<................-------.......->>>>>>>---..<<<<<<<---------....<<<<<...------------->>>>>>>>>>>>-<<<<.-<<<<<....<<<<<<<--.<<<<...--->>>>.--........>->>>---->>>--.<<<<<----------....------------->>->>>--..>>>>>>>>>-..<<<<.<<-<...<<<<<<........<<<<<<<.....<<<<<<<<<....--->>>>>>>>>....>>>>>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<<<<----------....----------->>>>>>>>>>>>.......]]]]]].<<..<<<<<---....------->>>>>---<<<<<<<<--....<<<-......>>>....--->>>>>>>>--<<<<<<<<-----------------...--------------->>>>>>>>-.....---<<<<<<<<<<<<<.<<--------------------------------------.............----------------------------->>.>>>>.>>>>>>>>>---------.....>>-..............
Ate.S1199 CAAUAACAGGUUAAC--------------------UUUCACA-GGCCUGU---AAAAGCGG---------CGCCUCAAAUGGAAAAAAGUCCACAA-----GACCGCUAGUCUA-AGGUAUUAGUCUGUGU--GGAGGAAGU--CCUCCU-AUUUUCGGG-CAC----AGA--ACA-------------AUAAAG---------------UGU--UUACCUAGGC-AACACCAGC-UGGUACAGGG-----AACGCCUCGAC-------------AAA----------------GUUCAGGCCGA-UCCUGUGGCGAGUCCAA-GUAACG-CUGGACCGUCGCAACGCACG-CUA-AGCGG-UGGGUCAUUUUU------------UUA--------------AAAAAUGGCUUAAGGUACGUGCUAGCC-CAUCC---GAAA-------GGAUG---CUUCUAUC--AAUAGGUCCGAAAAGCCGAAG---GAUAGAAG--GAUUGUAU-----------------UUAU--------------AUACAGUCGGGU--------------------------------------------------------------------------------------------------------------------------------UUAAAU-GCUGUGAUGCC---
.....<<<<<<<...--------------------.......->>>>>>>---...<<<<<---------....<<...<<<<......>>>>...----->>>>>>>.<<<<.-<<<<<....<<<<<<<--<<<<<....-->>>>>.-........>->>>---->>>--<<<-------------......--------------->>>--.>>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<.<<<-------------...---------------->>>.>>>>...->>>>>><<<<.<<<<<.-......-.>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<<------------...-------------->>>>>>>>>>.......]]]]]].<<.-<<<<<---....------->>>>>---<<<<<<<<--....<<<.......>>>....--->>>>>>>>--<<<<<<<<-----------------....-------------->>>>>>>>....--------------------------------------------------------------------------------------------------------------------------------....>>-...........---
Gvi.S1201 CAAUAACAGGUCUUAAC------------------CUACACA-GGCCUGU---AAAAGUAGAG-----------CCCAU-AA-------------------UUCUGCUAGUCCA-GCGUCUUAAUCUCCUC--AGGGGAAGC--CCCCU--AUUAUCGGG-AGG----AGA--CGGGGUUGAGC-----CUCCU-------GCUCGGC-CGCG--UGAUGCGGGC-CACACCACC-UGGUACAGGG-----AAGGCCUCGG--------------GAAA-----------------CCAGGCCGA-UCCUGUGGCGAGUCUGG-GUAGCG-CCAGACCGUCGCAACGCGCG-CAA-AGGGG-UGGGCGAC----------------CACG-----------------GUCGCUUAAGGUACGUGCUAAUCCCUUGG---GACAA------CCAAG---CCUCCGCA--AUGAGACCCGAUAAGUCGAGG---UGCGGGGG--GGUCAGC------------------UCUG---------------GCUGGCC-GG------GGUCCGUCGUGGC-----------------------------------------GAU-------------------------------------------GCCGCGGCGGGCC-----------AACAU-G--GUGAUGCCCUU
.....<<<<<<<<....------------------......>->>>>>>>---...<<<<<<<-----------.....-..------------------->>>>>>>.<<<<.-<<<<<....<<<<<<<--<<<<<....-->>>>>--........>->>>---->>>--<<.<<<<<<<<-----.....------->>>>>>>->.>>--.>>>>>>>>>-..<<<<.<<-<...<<<<<<-----..<<<<<.<<--------------....----------------->>>>>>>..->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<----------------....----------------->>>>>>.......]]]]]].<<..<<<<<---.....------>>>>>---<<<<<<<<--....<<<.......>>>....--->>>>>>>>--<<<<<<<------------------....--------------->>>>>>>-..------<<<<<<<<<<<<<-----------------------------------------...------------------------------------------->>>>>>>>>>>>>-----------...>>-.--...........
Sdi.S1199-2 CAAUAACAGGUUGACG-------------------ACAAACA-GGCCUGU---GACAGCGGGG----CUUCGAACUUUCCGUGUUUUUUUUUUU------CUUCCGCUAGUCGAUCAUCCGU---GACGGCC--GGGCAAGC--GCCCG--AGUACCAGG-ACC----GUC--GGGCCCCC--------GAGAAGG--------GGGG-GCC--UAGGAUGCGGC-AAGACGACC-CGGUUCGGGG-----AACGCCAGC---------------GUGC-----------------GCUGGCCGA-UCCCGAGGCGAGGUGCC-GUAGCG-GGCACCCGUCGUAACGCGCG-GUA-GGGCG-UCGGUCCCCCCUCC----------CACGGC---------GGAGGGGAGGCUUAAGGUACGUGCUAAAC-CCCCA---GCGA-------UGGGG---CCUGUAGG--AAAAGCCCUGGUACGGCGAAG---CCUACGGG--GACCGCC------------------CGAU---------------GGCGGUC-G-------GAUGCCGGCGGGC-----------------------------------------CACGGA-----------------------------------------GCCCCCGGCGUC------------GAUU-GCUGUUAUGCC---
.....<<<<<<<....-------------------.......->>>>>>>---...<<<<<<<----...........................------.>>>>>>>.<<<<..<<<<<..---<<<<<<<--<<<<....-->>>>.--.......>>-.>>---->>>--.<<<<<<<--------.......-------->>>>->>>--..>>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<<<---------------....----------------->>>>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<.<<<<<<<----------......--------->>>>>>>.>>>>.......]]]]]].<<.-<<<<<---....------->>>>>---<<<<<<<<--....<<<.......>>>....--->>>>>>>>--<<<<<<<------------------....--------------->>>>>>>-.-------<<<<<<<<.<<<<-----------------------------------------......----------------------------------------->>>>>>>>>>>>------------..>>-...........---
Sdi.S1199-3 CAAUAACAGGUUGACG-------------------ACAAACA-GGCCUGU---GACAGCGGGG----CUUCGAACUUUCCGUGUUUUUUUUUUU------CUUCCGCUAGUCGAUCAUCCGU---GACGGCC--GGGCAAGC--GCCCG--AGUACCAGG-ACC----GUC--GGGCCCCC--------GAGAAGG--------GGGG-GCC--UAGGAUGCGGC-AAGACGACC-CGGUUCGGGG-----AACGCCAGC---------------GUGC-----------------GCUGGCCGA-UCCCGAGGCGAGGUGCC-GUAGCG-GGCACCCGUCGUAACGCGCG-GUA-GGGCG-UCGGUCCCCCCUCC----------CACGGC---------GGAGGGGAGGCUUAAGGUACGUGCUAAAC-CCCCA---GCGA-------UGGGG---CCUGUAGG--AAAAGCCCUGGUACGGCGAAG---CCUACGGG--GACCGCC------------------CGAU---------------GGCGGUC-G-------GAUGCCGGCGGGC-----------------------------------------CACGGA-----------------------------------------GCCCCCGGCGUC------------GAUU-GCUGUUAUGCC---
.....<<<<<<<....-------------------.......->>>>>>>---...<<<<<<<----...........................------.>>>>>>>.<<<<..<<<<<..---<<<<<<<--<<<<....-->>>>.--.......>>-.>>---->>>--.<<<<<<<--------.......-------->>>>->>>--..>>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<<<---------------....----------------->>>>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<.<<<<<<<----------......--------->>>>>>>.>>>>.......]]]]]].<<.-<<<<<---....------->>>>>---<<<<<<<<--....<<<.......>>>....--->>>>>>>>--<<<<<<<------------------....--------------->>>>>>>-.-------<<<<<<<<.<<<<-----------------------------------------......----------------------------------------->>>>>>>>>>>>------------..>>-...........---
Sdi.S1199-4 CAAUAACAGGUUGACG-------------------ACAAACA-GGCCUGU---GACAGCGGGG----CUUCGAACUUUCCGUGUUUUUUUUUUUU-----CUUCCGCUAGUCGAUCAUCCGU---GACGGCC--GGGCAAGC--GCCCG--AGUACCAGG-ACC----GUC--GGGCCCCC--------GAGAAGG--------GGGG-GCC--UAGGAUGCGGC-AAGACGACC-CGGUUCGGGG-----AACGCCAGC---------------GUGC-----------------GCUGGCCGA-UCCCGAGGCGAGGUGCC-GUAGCG-GGCACCCGUCGUAACGCGCG-GUA-GGGCG-UCGGUCCCCCCUCC----------CACGGC---------GGAGGGGAGGCUUAAGGUACGUGCUAAAC-CCCCA---GCGA-------UGGGG---CCUGUAGG--AAAAGCCCUGGUACGGCGAAG---CCUACGGG--GACCGCC------------------CGAU---------------GGCGGUC-G-------GAUGCCGGCGGGC-----------------------------------------CACGGA-----------------------------------------GCCCCCGGCGUC------------GAUU-GCUGUUAUGCC---
.....<<<<<<<....-------------------.......->>>>>>>---...<<<<<<<----............................-----.>>>>>>>.<<<<..<<<<<..---<<<<<<<--<<<<....-->>>>.--.......>>-.>>---->>>--.<<<<<<<--------.......-------->>>>->>>--..>>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<<<<---------------....----------------->>>>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<.<<<<<<<----------......--------->>>>>>>.>>>>.......]]]]]].<<.-<<<<<---....------->>>>>---<<<<<<<<--....<<<.......>>>....--->>>>>>>>--<<<<<<<------------------....--------------->>>>>>>-.-------<<<<<<<<.<<<<-----------------------------------------......----------------------------------------->>>>>>>>>>>>------------..>>-...........---
Bsa.S1199-1 CAAUAACAGGUUAACCUA-----------------UAUCACA-GGCCUGU---AAUAGCAG---------UUGCCUCAGACUGUUACAA----------UUUUCUGCUAGUCCA-AUGU-UUAAUCUCUGUU--GGAGAAGU--CUCCUUUCCUGUCGGG-CAG----AGA--CGGUUG----------CUUG------------CAA-CUG----UACAUGGGC-AACACAACC-UGGUACAAGG-----GACGCCUAACUC------------AAAA---------------GAGAAGGCCGA-CCAUGUGGCGAGCUUGA-GUAACG-UCAAGCCGUCGCAACGCGCGACAA-AGGUG-UGGGUCAACUU-------------UUUAU-------------AAGUUGGCUUAAGGUACGUGCUACUCCCAGAG---GAUAA------CUCUG---CAACAGUGU-CAA-GGGCCGACAAACCAAA---ACACUGUUG--GGCAAAAGU----------------UAAUC------------GCUUUUGCU-GGU-------------------------------------------------------------------------------------------------------------------------------UUUAAAU-GCUGUGAUGCCCUU
.....<<<<<<<......-----------------.......->>>>>>>---..<<<<<<---------...................----------....>>>>>><<<<.-<<<<-....<<<<<<<<--<<<<....-->>>>..........>>->>>---->>>--<<<<<<----------....------------>>>->>>----.>>>>>>>>-..<<<<.<<-<...<<<.<<-----...<<<<..<<<------------....--------------->>>.>>>>...->>.>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[....->>>>>->><<<<<<<<<-------------.....------------->>>>>>>>>.......]]]]]]<.<..<<<<<---.....------>>>>>---<<<<<<<<<-...-<<.........>>...--->>>>>>>>>--<<<<<<<<<----------------.....------------>>>>>>>>>-...-------------------------------------------------------------------------------------------------------------------------------.....>>-..............
Bsa.S1199-2 CAAUAACAGGUUAACCUA-----------------UAUCACA-GGCCUGU---AAUAGCAG---------UUGCCUCAGACUGUUACAA----------UUUUCUGCUAGUCCA-AUGU-UUAAUCUCUGUU--GGAGAAGU--CUCCUUUCCUGUCGGG-CAG----AGA--CGGUUG----------CUUG------------CAA-CUG----UACAUGGGC-AACACAACC-UGGUACAAGG-----GACGCCUAACUC------------AAAA---------------GAGAAGGCCGA-CCAUGUGGCGAGCUUGA-GUAACG-UCAAGCCGUCGCAACGCGCGACAA-AGGUG-UGGGUCAACUU-------------UUUAU-------------AAGUUGGCUUAAGGUACGUGCUACUCCCAGAG---GAUAA------CUCUG---CAACAGUGU-CAA-GGGCCGACAAACCAAA---ACACUGUUG--GGCAAAAGU----------------UAAUC------------GCUUUUGCU-GGU-------------------------------------------------------------------------------------------------------------------------------UUUAAAU-GCUGUGAUGCCCUU
.....<<<<<<<......-----------------.......->>>>>>>---..<<<<<<---------...................----------....>>>>>><<<<.-<<<<-....<<<<<<<<--<<<<....-->>>>..........>>->>>---->>>--<<<<<<----------....------------>>>->>>----.>>>>>>>>-..<<<<.<<-<...<<<.<<-----...<<<<..<<<------------....--------------->>>.>>>>...->>.>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[....->>>>>->><<<<<<<<<-------------.....------------->>>>>>>>>.......]]]]]]<.<..<<<<<---.....------>>>>>---<<<<<<<<<-...-<<.........>>...--->>>>>>>>>--<<<<<<<<<----------------.....------------>>>>>>>>>-...-------------------------------------------------------------------------------------------------------------------------------.....>>-..............
Bth.S1199-1 CAAUAACAGGUUAACGUCUAU--------------AAUCACA-GGCCUGU---AAAAGCGGUGGUGCCAACUUAUAAGUGCUAGUGAUCUAGUGCUACAAAAUCCGCUAGUCCA-AGAGGUUAAUCGAUGC--GGAAAAGC---UUUCC--AUAGUCGGG-CAU----CGA--GAGUGUU---------UUAACU---------AACA-CUU---GCUUCUGGGC-GACACAACC-UGGUACAGGG-----AACGCCAAACAG------------GUAAUG--------------CUGAGGUCGA-UCCUGUGGUGAGUUAGA-GUAGCG-UCUAACCAUCGCAACGCGCG-CAA-AGGUG-UGGGUCUUAUC-------------UGUG--------------GAUAAGGCUUAAGGUACGUGCUAAUC-CCACUA--GUAA------UAGUGG---UUUGCUUGA----GAGCCC-ACA-GCUAAA---UCA-GUAAAG-GGUUUGGACU---------------U-UA------------AGUUCAGACC-G------------------------------------------------------------------------------------------------------------------------AAUCCAUUACAAAAAU-GCUGUGAUGCCCUU
.....<<<<<<<.........--------------.......->>>>>>>---...<<<<<...........<<<.<<<<<<<<....>>>>>>>>>>>....>>>>>.<<<<.-<<<<<....<<<<<<<--<<<<<...--->>>>>--........>->>>---->>>--<<<<<<<---------......--------->>>>->>>---.>>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<...<<<------------......-------------->>>.>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<-------------....-------------->>>>>>>>>.......]]]]]].<<.-<<<<<<--....------>>>>>>---<<<<<.<<<----.<<<..-...->>>...--->>>->>>>>.-<<<<<<<<<<---------------.-..------------>>>>>>>>>>-.------------------------------------------------------------------------------------------------------------------------..............>>-..............
Bth.S1199-2 CAAUAACAGGUUAACGUCUAU--------------AAUCACA-GGCCUGU---AAAAGCGGUGGUGCCAACUUAUAAGUGCUAGUGAUCUAGUGCUACAAAAUCCGCUAGUCCA-AGAGGUUAAUCGAUGC--GGAAAAGC---UUUCC--AUAGUCGGG-CAU----CGA--GAGUGUU---------UUAACU---------AACA-CUU---GCUUCUGGGC-GACACAACC-UGGUACAGGG-----AACGCCAAACAG------------GUAAUG--------------CUGAGGUCGA-UCCUGUG-UGAGU-AGA-GUAGCG-UCUAACCAUCGCAACGCGCG-CAA-AGG-G-UGGGUCUUAUC-------------UGUG--------------GAUAAGGCUUAAGGUACGUGCUAAUC-CCACUA--GUAA------UAGUGG---UUUGCUUGA---GGAGCCC-ACA-GCUAAA---UCAAGUAAAG-GGUUUGGACU---------------UGUA------------AGUUCAGACC-G------------------------------------------------------------------------------------------------------------------------AAUCCAUUACAAAAAU-GCUGUGAUGCCCUU
.....<<<<<<<.........--------------.......->>>>>>>---...<<<<<...........<<<.<<<<<<<<....>>>>>>>>>>>....>>>>>.<<<<.-<<<<<....<<<<<<<--<<<<<...--->>>>>--........>->>>---->>>--<<<<<<<---------......--------->>>>->>>---.>>>>>>>>>-..<<<..<<-<...<<<<<<-----...<<<...<<<------------......-------------->>>.>>>...->>>>>><-<<.<<-<<<-......->>>.>>>>.>...[.[[[[[-...->>>->->><<<<<<<<<-------------....-------------->>>>>>>>>.......]]]]]].<<.-<<<<<<--....------>>>>>>---<<<<<<<<<---..<<<..-...->>>...--->>>>>>>>>.-<<<<<<<<<<---------------....------------>>>>>>>>>>-.------------------------------------------------------------------------------------------------------------------------..............>>-..............
Bth.S1199-3 CAAUAACAGGUUAACGUCUAU--------------AAUCACA-GGCCUGU---AAAAGCGGUGGUGCCAACUUAUAAGUGCUAGUGAUCUAGUGCUACAAAAUCCGCUAGUCCA-AGAGGUUAAUCGAUGC--GGAAAAGC---UUUCC--AUAGUCGGG-CAU----CGA--GAGUGUU---------UUAACU---------AACA-CUU---GCUUCUGGGC-GACACAACC-UGGUACAGGG-----AACGCCAAACAG------------GUAAUG--------------CUGAGGUCGA-UCCUGUGGUGAGUUAGA-GUAGCG-UCUAACCAUCGCAACGCGCG-CAA-AGGUG-UGGGUCUUAUC-------------UGU---------------GAUAAGGCUUAAGGUACGUGCUAAUC-CCACUA--GUAA------UAGUGG---UUUGCUUAG---GAGGCCC-ACA-GCUAAA---UCAAGUAAAG-GGUUUGGACU---------------UGUA------------AGUUCAGACC-GG-----------------------------------------------------------------------------------------------------------------------AAUCCAUUACAAAAAU-GCUGUGAUGCCCUU
.....<<<<<<<.........--------------.......->>>>>>>---...<<<<<...........<<<.<<<<<<<<....>>>>>>>>>>>....>>>>>.<<<<.-<<<<<....<<<<<<<--<<<<<...--->>>>>--........>->>>---->>>--<<<<<<<---------......--------->>>>->>>---.>>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<...<<<------------......-------------->>>.>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<-------------...--------------->>>>>>>>>.......]]]]]].<<.-<<<<<<--....------>>>>>>---<<<<<<<<<---..<<<..-...->>>...--->>>>>>>>>.-<<<<<<<<<<---------------....------------>>>>>>>>>>-..-----------------------------------------------------------------------------------------------------------------------..............>>-..............
Bth.S1199-4 CAAUAACAGGUUAACGUCUAU--------------AAUCACA-GGCCUGU---AAAAGCGGUGGUGCCAACUUAUAAGUGCUAGUGAUCUAGUGCUACAAAAUCCGCUAGUCCA-AGGGGUUAAUCGAUGC--GGAAAAGC---UUUCC--AUAGUCGGG-CAU----CGA--GAGUGUU---------UUAACU---------AACA-CUU---GCUUCUGGGC-GACACAACC-UGGUACAGGG-----AACGCCAAACAG------------GUAAUG--------------CUGAGGUCGA-UCCUGUGGUGAGUUAGA-GUAGCG-UCUAACCAUCGCAACGCGCG-CAA-AGGUG-UGGGUCUUAUC-------------UGUG--------------GAUAAGGCUUAAGGUACGUGCUAAUC-CCACUA--GUAA------UAGUGG---UUUGCUUGA--GGAGGCCCGACA-GCUAAA---UCAAGUAAAG-GGUUUGGACU---------------UGUA------------AGUUCAGACC-GG-----------------------------------------------------------------------------------------------------------------------AAUCCAUUACAAAAAU-GCUGUGAUGCCCUU
.....<<<<<<<.........--------------.......->>>>>>>---...<<<<<...........<<<.<<<<<<<<....>>>>>>>>>>>....>>>>>.<<<<.-<<<<<....<<<<<<<--<<<<<...--->>>>>--........>->>>---->>>--<<<<<<<---------......--------->>>>->>>---.>>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<...<<<------------......-------------->>>.>>>...->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<<-------------....-------------->>>>>>>>>.......]]]]]].<<.-<<<<<<--....------>>>>>>---<<<<<<<<<--...<<<......->>>...--->>>>>>>>>.-<<<<<<<<<<---------------....------------>>>>>>>>>>-..-----------------------------------------------------------------------------------------------------------------------..............>>-..............
Sta.S1199 CAAUAACAGGUUACCUUUCGAUAUCUUAU------CAUCACA-GGCCUGU---AAUAGAGCGUU---------------UGAG-----------------AACGCUUUAGUCA--ACCC----------------------------------GUUU------------------------------------------------------------GGGUUGGC-AACACUUGC-UGGAACAGGG-----AAAGCCCCCUCUUU----------AAAUC-------------AAAGACGGCUGA-UCCUGUGGCGAGCCUUC-UUCAGU-GAAGGCCGUCGCAACGCGCG-CAA-AGCAG-UGGGCUGUC---------------AGUA----------------GACGGCUUAAGGUACGUGCUAAUCCCAUGC---GCAA-------GCAUG---CCGAUGAAG-U-AAAGCCCAG-A-GCUAA---ACUCGUUCGG--GGAACUC------------------GCCU---------------GAGUUCU-GGU-------------------------------------------------------------------------------------------------------------------------------AUUGAAU-GCUGUGAUGCCCUU
.....<<<<<<<.................------.......->>>>>>>---..<<<<<<<<<---------------....----------------->>>>>>>>><<<<--<<<<----------------------------------....------------------------------------------------------------>>>>>>>>-..<<<<.<<-<...<<<<<<-----..<<<<...<<<<<----------.....------------->>>>>.>>>>..->>>>>><<<<.<<<<<<-......->>>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<---------------....---------------->>>>>>>.......]]]]]].<<..<<<<<---....------->>>>>---<<<<<<<.<-<-..<<<....-.->>>..--->>>>>.>>>>--<<<<<<<------------------....--------------->>>>>>>-...-------------------------------------------------------------------------------------------------------------------------------.....>>-..............
Tor.S1199 CAAUAACAGGUUAACC-------------------UAUCACA-GGCCUGU---AACAGCUGC------------------GAG-------------------GCAGCUAGUCCA-GCGUCGA--CGUCUGC----------------------AUUUGGGGCAG----AUG--GGGUCU----------GUUU------------AGA-CCU---UGGCGCGGGC-GACACAACC-UGGUACAGGA-----AACGCCCCGGCA------------GCAA---------------UGCCAGGCCGA-UCCUGUGGCGAGCUCU---GCGA---GGAGCCGUCGCAACGUGCG-GAA-AGGUG-UGGGUCUUUC--------------UAG----------------GAAAGGCUUAAGGUACGUACUAAUCCCCGGG---GAAA-------CCCGG---CCUCUGCGA-GAAGAGCCCAA-A-CUCUAUG---CGCAGGGG--GAGGCAAC-----------------GGU---------------GUUGCCUU-GGU-------------------------------------------------------------------------------------------------------------------------------AU-ACAU-GCUGUGAUGCCCUU
.....<<<<<<<....-------------------.......->>>>>>>---...<<<<<<------------------...------------------->>>>>>.<<<<.-<<<<<<.--<<<<<<<----------------------.......>>>>---->>>--.<<<<<----------....------------>>>->>.--->>>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<..<<<<------------....--------------->>>>.>>>...->>>>>><<<<.<<<<<---....--->>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<--------------...---------------->>>>>>>>.......]]]]]].<<..<<<<<---....------->>>>>---<<<<<<<<.-..<<<<.....-.->>>>...--->>>>>>>>--<<<<<<<<-----------------...--------------->>>>>>>>-...-------------------------------------------------------------------------------------------------------------------------------..-..>>-..............
Gph.S1199 ---UAACAGGUUAACU--------------------UUCACA-GGCCUGU---AAAAGCAU----------------CAUUGU--------------------AUGCUAGUCCA-GCAUUCGC-UGUCUCU----------------------UGUCGGG--AG----ACA--UGUAU-----------AUAC-------------AUACA----AGGUGCGGGCAAACACAACC-UGGAUCGGGG-----AACGCUAAGGGAUGC---------ACAA-------------GCAUUCUAUGCCAACCCCGAGUGCAGUC-----GAAA-----GACGCAUGUAACGCGCG-GAA-AGGUG-UGGGUACUUCUAU-----------ACUUG----------AUAAAAAGUGCUUAAGGUACGUGCU-AUCCCACUC---GAAA-------GAGUG---CCAGUGUGG-UAAGG-UCCGACA-GACU-GAGCCAUGCAAGG--AAAGUAGC-----------------AAGCAA------------GCUGCUUU----------------------------------------------------------------------------------------------------------------------------------GGUAUUAUUGCUGUGAUGCCCUU
---..<<<<<<<....--------------------......->>>>>>>---...<<<<<----------------......-------------------->>>>>.<<<<.-<<<<<...-<<<<<<<----------------------.....>>-->>---->>>--<<<<<-----------....------------->>>>>----.>>>>>>>>>...<<<<.<<-<...<<<<<<-----...<<...<<<<<<<---------....------------->>>>>>>..>>...>>>>>><<<<.<<<-----....----->>>>>>>...[.[[[[[-...->>>>>->><<<<<<<.<<<-----------.....---------->>>..>>>>>>>.......]]]]]]-<<..<<<<<---....------->>>>>---<<.<<<<<<-<..<<-<<.....->>>>-..>>>>>>>..>>--<<<<<<<<-----------------......------------>>>>>>>>----------------------------------------------------------------------------------------------------------------------------------......>>...............
Ti_fl.S1199-1 CAAUAACAGGUUAACC-------------------UAUCACA-GGCCUGU---AACAGCUGC------------------AAG-------------------GCAGCUAGUCCA-GCGUCGA--CAUCUGC----------------------GUUUGGGGCAG----AUG--GGGUCU----------UUUU------------GGA-CCU---UGGCGCGGGC-GACACAACC-UGGUACAGGA-----AACGCCCCGGCA------------GCAA---------------UGCCAGGCCGA-UCCUGUGGCGAGCUCU---GCGG---GGAGCCGUCGCAACGUGCG-GAA-AGGUG-UGGGUCUUUC--------------UCUAU--------------GAAAGGCUUAAGGUACGUACUAAUCCCCGGG---GAAA-------CCCGG---CCUCUGCGA-GAAGAGCCCAA-A-CUCUAUG---CGCAGGGG--GAAGCUUGC----------------G-AAU-----------GCAAAGCUUU-GG------CGAUGAUC----------------------------------------------CUUUGU----------------------------------------------GACAUCG----------AUAAAU-GCUGUGAUGCC-UU
.....<<<<<<<....-------------------.......->>>>>>>---...<<<<<<------------------...------------------->>>>>>.<<<<.-<<<<<<.--<<<<<<<----------------------.......>>>>---->>>--.<<<<<----------....------------>>>->>.--->>>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<..<<<<------------....--------------->>>>.>>>...->>>>>><<<<.<<<<<---....--->>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<--------------.....-------------->>>>>>>>.......]]]]]].<<..<<<<<---....------->>>>>---<<<<<<<<.-..<<<<.....-.->>>>...--->>>>>>>>--<<<<<<<<<----------------.-...----------->>.>>>>>>>-..------<<<<<.<<----------------------------------------------......---------------------------------------------->>>>>>>----------....>>-...........-..
Ti_fl.S1199-2 -AAUAACAGGUUAACC-------------------UAUCACA-GGCCUGU---AACAGCUGC------------------AAG-------------------GCAGCUAGUCCA-GCGUCGA--CGUCUGC----------------------GUUUGAGGCAG----AUG--GGGUCU----------UUU-------------GGA-CCU---UGGCGCGGGC-GACACAACC-UGGUACAGGA-----AACGCCCCGGCA------------GCAA---------------UGCCAGGCCGA-UCUGUUGGCGAGCUCU---GCGA---GGAGCCGUCGCAACGUGCG-GAA-AGGUG-UGGGUCUUUC--------------UCUAU--------------GAAAGGCUUAAGGUACGUACUAAUCCCCGGG---GAAA-------CCCGGG--CCUCUGCGA-GAAGAGCCCAA-A-CUCUAUG---CGCAGGGG--GAAGCUUGC----------------GGAAU-----------GCAAAGCUUU-GG------CGAUGAUC----------------------------------------------CUUUGU----------------------------------------------GACAUCG----------AUAAAU-GCUGUGAUGCCCUU
-....<<<<<<<....-------------------.......->>>>>>>---...<<<<<<------------------...------------------->>>>>>.<<<<.-<<<<<<.--<<<<<<<----------------------.......>>>>---->>>--.<<<<<----------...------------->>>->>.--->>>>>>>>>>-..<<<<.<<-<...<<<<<<-----...<<<..<<<<------------....--------------->>>>.>>>...->>>>>><<<<.<<<<<---....--->>>>>>>>>...[.[[[[[-...->>>>>->><<<<<<<<--------------.....-------------->>>>>>>>.......]]]]]].<<.<<<<<<---....------->>>>>>--<<<<<<<<.-..<<<<.....-.->>>>...--->>>>>>>>--<<<<<<<<<----------------.....----------->>.>>>>>>>-..------<<<<<.<<----------------------------------------------......---------------------------------------------->>>>>>>----------....>>-..............