# P1 P10 P1' P2 P2' P2.1 P13 P2.1' P3 P4 P5 P5' P4' P6 P6' P7 P3' P8 P8' P7' P9.0 P9 P9' P9.1 P13' P9.1' P9.2 P9.2' P9.3 P9.3' P9. P10'
Rca.S516-1 aagucuggu--GGACGAGAU-GUCCCAGCGGCAUAGU---------------ACUGCUGACGCCAGAAAUAGCGGGG-------------------CUU---------------------------UCCCGCUG-GUCGAGCACCC-----------------GAGUCCCCGCGUGGUAGGG-------------GGGUGCC-GGCGA-GACAACCU-AGG-UCGGGGGAGGUCUUGGUUGGGCCGCUC------------AAUU-----------GAGCGGUCCCCC-U-GCUAAUCCCGA--GCGGNNCCC---------------ACC-------------GGGCGCCCGU-GUA-GAGCGCGCAC-AGGUGUC-GGCCAGC-----------------CUCU-------------------GUCUGGCUUAAGGGACGUGCCAUCC-CCGCUCGAAAGAGCG-CCUCGGGUCCAAGCUCCCUACUCU-GCGAGGCCCCGAGGA-----ACCCUG-------------------AU-CAUC----------------------------------CGGGGUC-------------------GGAUCCCCCGC----------------------AAUUC--------------GCGGGAUAUUU-------------------------------AGAGG-gccagcagcc
...<<<<<<--<........-................---------------.[[[[[[[^>>>>>>..<<<<<<<<-------------------...--------------------------->>>>>>>>-<<<<.<<<<<<-----------------...................------------->>>>>>>->>>..-<<<<.<<<-...-<<<<<<..<<<...<<..<<<<<<<<<------------....----------->>>>>>>>>.>>-.->>>..>>>>>>--<<<<..<<<---------------...------------->>>...>>>>-...-[.[[[[[...->>>>>>>-<<<<<<<-----------------....------------------->.>>>>>>.......]]]]]].<<.-.<<<<<....>>>>>-<<<<<<<.<<..<<..........->>..>>.>>>>>>>.-----<<<<<<-------------------..-....---------------------------------->>>>>>.-------------------<<<<..<<<<<----------------------.....-------------->>>>>..>>>>-------------------------------.>>..-]]]]]]]]..
Rca.S516-2 aagucuggu--GGACGAGAU-GUCCCAGCGGCAUAGC---------------ACUGCUGACGCCAGAAAUAGCGGGG-------------------CUU---------------------------UCCCGCUG-GUCGAGCACCC-----------------GAGUCCCCGCGUGGUAGGG-------------GGGUGCC-GGCGA-GACAACCU-GGG-UCGGGGGAGGUCUUGGGUGGGCCGCUC------------AAUU-----------GAGCGGUCCCCC-U-GCUAAUCCCGA--GCGGNNCCC---------------ACC-------------GGGCGCCCGU-GUA-GAGCGCGCAC-AGGUGUC-GGCCAGC-----------------CUCU-------------------GUCUGGCUUAAGGGACGUGCCAUCC-CCGCUCGAAAGAGCG-CCUCGGGUCCAAGCUCCCUACUCU-GCGAGGCCCCGAGGA-----ACCCUG-------------------AU-CAUC----------------------------------CGGGGUU-------------------GGAUCCCCCGA----------------------AGUUC--------------GCGGGAUAUUU-------------------------------AGA-G-gccagcagcc
...<<<<<<--<........-................---------------.[[[[[[[^>>>>>>..<<<<<<<<-------------------...--------------------------->>>>>>>>-<<<<.<<<<<<-----------------...................------------->>>>>>>->>>..-<<<<.<<<-...-<<<<<<..<<<...<<..<<<<<<<<<------------....----------->>>>>>>>>.>>-.->>>..>>>>>>--<<<<..<<<---------------...------------->>>...>>>>-...-[.[[[[[...->>>>>>>-<<<<<<<-----------------....------------------->.>>>>>>.......]]]]]].<<.-.<<<<<....>>>>>-<<<<<<<.<<..<<..........->>..>>.>>>>>>>.-----<<<<<<-------------------..-....---------------------------------->>>>>>.-------------------<<<<..<<<<.----------------------.....--------------.>>>>..>>>>-------------------------------.>>-.-]]]]]]]]..
Rca.S516-3 aagucuggu--GGACGAGAU-GUCCCAGCGGCAUAGC---------------ACUGCUGACGCCAGAAAUAGCGGGG-------------------CUU---------------------------UCCCGCUG-GUCGAGCACCC-----------------GAGUCCCCGCGUGGUAGGG-------------GGGUGCC-GGCGA-GACAACCU-GGG-UCGGGGGAGGUCUUGGGUGGGCCGCUC------------AAUU-----------GAGCGGUCCCCC-U-GCUAAUCCCGA--GCGGNNCCC---------------ACC-------------GGGCGCCCGU-GUA-GAGCGCGCAC-AGGUGUC-GGCCAGC-----------------CUCU-------------------GUCUGGCUUAAGGGACGUGCCAUCC-CCGCUCGAAAGAGCG-CCUCGGGUCCAAGCUCCCUACUCU-GCGAGGCCCCGAGGA-----ACCCUG-------------------AU-CAUC----------------------------------CGGGGUU-------------------GGAUCCCCCGA----------------------AGUUC--------------GCGGGAUAUUU-------------------------------AGA-G-gccagcagcc
...<<<<<<--<........-................---------------.[[[[[[[^>>>>>>..<<<<<<<<-------------------...--------------------------->>>>>>>>-<<<<.<<<<<<-----------------...................------------->>>>>>>->>>..-<<<<.<<<-...-<<<<<<..<<<...<<..<<<<<<<<<------------....----------->>>>>>>>>.>>-.->>>..>>>>>>--<<<<..<<<---------------...------------->>>...>>>>-...-[.[[[[[...->>>>>>>-<<<<<<<-----------------....------------------->.>>>>>>.......]]]]]].<<.-.<<<<<....>>>>>-<<<<<<<.<<..<<..........->>..>>.>>>>>>>.-----<<<<<<-------------------..-....---------------------------------->>>>>>.-------------------<<<<..<<<<.----------------------.....--------------.>>>>..>>>>-------------------------------.>>-.-]]]]]]]]..
Rca.S516-4 aagucuggu--GGACGAGAU-GUCCCAGCGGCAUAGC---------------ACUGCUGACGCCAGAAAUAGCGGGG-------------------CUU---------------------------UCCCCGUGGGUCGAGCACCC-----------------GAGUCCCCGCGUGGUAGGG-------------GGGUGCC-GGCGA-GACAACCU-GGG-UCGGGGGAGGUCUUGGGUGAGCCGCUU------------GAUU-----------GAGCGGUCCUCC-U-GCUAAUCCCGA--GCGGNNCCU---------------ACG-------------GNNNNNCCGU-GUA-GAGCGCGCAC-AGGUGUC-GGCCAGC-----------------CUCU-------------------GUCUGGCUUAAGGGACGUGCCAUCC-CCGCUCGAAAGAGCG-CCUCGGGUCCAAGCUCCCUACUCU-GCGAGGCCCCGAGGA-----ACCCCG-------------------AU-CAUC----------------------------------UGGGGUU-------------------GGGUCCCCNGA----------------------GUUUC--------------GGGGGAUUUUU-------------------------------AGA-G-gccagcagcc
...<<<<<<--<........-................---------------.[[[[[[[^>>>>>>..<<<<<<<<-------------------...--------------------------->>>>>>>>.<<<<.<<<<<<-----------------...................------------->>>>>>>->>>..-<<<<.<<<-...-<<<<<<..<<<...<<..<<<<<<<<<------------....----------->>>>>>>>>.>>-.->>>..>>>>>>--<<<<..<<<---------------...------------->>>...>>>>-...-[.[[[[[...->>>>>>>-<<<<<<<-----------------....------------------->.>>>>>>.......]]]]]].<<.-.<<<<<....>>>>>-<<<<<<<.<<..<<..........->>..>>.>>>>>>>.-----<<<<<<-------------------..-....---------------------------------->>>>>>.-------------------<<<<..<<...----------------------.....--------------...>>..>>>>-------------------------------.>>-.-]]]]]]]]..
Rfi.S516 aagucuggu--GGACGUCUUAGUCCCAGCGGUAUUAU---------------UCUGCUGACGCCAGCAAUAGUGGGAAUCUUAGGGGGCCCUA---GAGUUGGAUUGGCCCUUAAGACAUAUAUAUACCCGCUG-GUCGAGUAUCC----------------------GUCACCUGGUAGGU-------------GGAUAUC-GGCAA-GACAACCU-GGU-UCGGGGAAGGCGUUGGGCUAUGU----------------AUG---------------AUAUAGCUAUACGCUAAUCCCGA--GCGGAGUUCUGCUUUAUCGUAGG-(11)CCUAUUUUAGAGCAGGCCCCGU-GUA-GAGCGCGCGC-AGGUGUC-GGCUG-------------------62nt----------------------CAGCUUAAGGGACGUGCC-ACC-CCAUUCAAAAGAAUG-CCUUUAGCCACAGCAACCUACCG-UGCAAGGGCUAGAGG------GGCUUCUAAUACGUGU-------CCAUACAU-------------------------ACACGUAUAAAAGGCCG-------------------GAAUUUUUCGUAGCCUGA---------------(96)------UCUUGCUACGUAAAAUCUUC----------------------------UUAAGU-G--ccagcagcc
...<<<<<<--<.........................---------------.[[[[[[[>>>>>>>..<<<<<<<..<<<<<<<<<.<<<<<---....>>>...>>>>>>>>>>>..........>>>>>>>-<<<<.<<<<<<----------------------..............------------->>>>>>>->>>..-<<<<.<<<-...-<<<<<<..<<<<<..<<<<<<<<----------------...--------------->>>>>>>>..>>>>>..>>>>>>--<<<<.<.<<<<<<<<<..<<<<<-~~~~>>>>>..>>>>>>>>>>.>>>>-...-[.[[[[[...->>>>>>>-<<<<<-------------------....---------------------->>>>>.......]]]]]]-<<.-.<<<<<....>>>>>-<<<<<<<<<...<<<........->>>...>>>>>>>>>------<<<<<...<<<<<<<<-------........------------------------->>>>>>>>...>>>>>.-------------------<<<.<<<<<<<<<<..<<---------------~~~~------>>..>>>>>>.>>>>..>>>----------------------------....>>-.--]]]]]]]..
Rtu.S516-1 aagucuggu--GGACGAGAU-GUCCCAGCGGCAUAGC---------------ACUGCUGACGCCAGAAAUAGCGGGG-------------------CUU---------------------------UCCCGCUG-GUCGAGCACCC-----------------GAGUCCCCGCGUGGUAGGG-------------GGGUGCC-GGCGA-GACAACCU-GGG-UCGGGGGAGGUCUUGGGUGGGCCGCUC------------AAUU-----------GAGCGGUCCUCC-U-GCUAAUCCCGA--GCGGNNCCC---------------ACC-------------GGGCGCCCGU-GUA-GAGCGCGCAC-AGGUGUC-GGCCAGC-----------------CUCU-------------------GUCUGUCUUAAGGGACGUGCCAUCC-CCGCUCGAAAGAGCG-CCUCGGGUCCAAGCUCCCUACUCU-GCGAGGCCCCGAGGG-----ACCCUG-------------------AU-CAUC----------------------------------CGGGGUU-------------------GGAUCCCCCGA----------------------AGUUC--------------GCGGGAUAUUU-------------------------------AGA-G-gccagcagcc
...<<<<<<--<........-................---------------.[[[[[[[^>>>>>>..<<<<<<<<-------------------...--------------------------->>>>>>>>-<<<<.<<<<<<-----------------...................------------->>>>>>>->>>..-<<<<.<<<-...-<<<<<<..<<<...<<..<<<<<<<<<------------....----------->>>>>>>>>.>>-.->>>..>>>>>>--<<<<..<<<---------------...------------->>>...>>>>-...-[.[[[[[...->>>>>>>-<<<<<<<-----------------....------------------->.>>>>>>.......]]]]]].<<.-.<<<<<....>>>>>-<<<<<<<.<<..<<..........->>..>>.>>>>>>>.-----<<<<<<-------------------..-....---------------------------------->>>>>>.-------------------<<<<..<<<<.----------------------.....--------------.>>>>..>>>>-------------------------------.>>-.-]]]]]]]]..
Rtu.S516-2 aagucuggu--GGACGAGAU-GUCCCAGCGGCAUAGC---------------ACUGCUGACGCCAGAAAUAGCGGGG-------------------CUU---------------------------UCCCCGUGGGUCGAGCACCC-----------------GAGUCCCCGCGUGGUAGGG-------------GGGUGCC-GGCGA-GACAACCU-GGG-UCGGGGGAGGUCUUGGGUGAGCCGCUU------------GAUU-----------GAGCGGUCCCCC-U-GCUAAUCCCGA--GCGGGNCCU---------------ACG-------------GGGCGCCCGU-GUA-GAGCGCGCAC-AGGUGUC-GGCCAGC-----------------CUCU-------------------GUCUGGCUUGAGGGACGUGCCAUCC-CCGCUCGAAAGAGCG-CCUCGGGUCCAAGCUCCCUACUCU-GCGAGGCCCCGAGGA-----ACCCCG-------------------AU-CAUC----------------------------------UGGGGUU-------------------GGGUCCCCNGA----------------------GUUUC--------------GGGGGAUUUUU-------------------------------AGA-G-gccagcagcc
...<<<<<<--<........-................---------------.[[[[[[[^>>>>>>..<<<<<<<<-------------------...--------------------------->>>>>>>>.<<<<.<<<<<<-----------------...................------------->>>>>>>->>>..-<<<<.<<<-...-<<<<<<..<<<...<<..<<<<<<<<<------------....----------->>>>>>>>>.>>-.->>>..>>>>>>--<<<<..<<<---------------...------------->>>...>>>>-...-[.[[[[[...->>>>>>>-<<<<<<<-----------------....------------------->.>>>>>>.......]]]]]].<<.-.<<<<<....>>>>>-<<<<<<<.<<..<<..........->>..>>.>>>>>>>.-----<<<<<<-------------------..-....---------------------------------->>>>>>.-------------------<<<<..<<...----------------------.....--------------...>>..>>>>-------------------------------.>>-.-]]]]]]]]..
Epr.S516 ---ucuggu--GACCACAGUCUCAUAAA-------------------------CUGCUGACGCCAGUGAGAGCCACAG------------------UCCGU-----------------------CUGAUGGCUA-GUCGACCAUCCACC----------------------GAUUGGUAGGA-------------GGAUGGC-GGCGA-GACAACCU-GGA-UCGGGGGAGGCUAACGGCC--------------------GCU--------------------GGCCUAUGCUAAUCCCGA--GCGGAGUGCCCCUGGA--------GUGA------UCCUGGGAACACCCGU-GUA-GAGCGCGCCA-AGGUGUC-GGUGGUGCUCGGG-----------GUCAUA------------CCCGAGACCCACUUAAGGUACGUGCCGGCC-CCGAUCGAAAGAUUG-CCUUUAACUAGAGUG-CCUACCA-CACGAAGGUUAUGGGG-----GCGUC---------------------GAUUCAA----------------------------------GACGCU-------------------GGCAGCUCCUAAAAGACAUA-------------(74)-----UGUGUCUUUUGAGGGUUCGUC-------------------------------CG--G-gccagcagcc
---.<<<<<--<................-------------------------[[[[[[[^>>>>>....<<<<<<<<------------------.....----------------------->>>.>>>>>.-<<<<.<<<<<<.<<----------------------........>>.------------->>>>>>>->>>..-<<<<.<<<-...-<<<<<<..<<<....<<<<--------------------...-------------------->>>>...>>>..>>>>>>--<<<<.<<<.<<<.<<<--------....------>>>.>>>..>>>>>>>-...-[.[[[[[...->>>>>>>-<<<<<..<<<<<<-----------......------------>>>>>>..>>>>>.......]]]]]]..<.-.<<<<<....>>>>>-<<<<<<<<<...<<<-.......->>>...>>>>>.>>>>-----<<<<<---------------------.......---------------------------------->>>>>.-------------------<<<<<<<<.<<<<<<<<<<<-------------~~~~----->>>>>>>>>>>.>>>>>.>>>-------------------------------.>--.-]]]]]]]]..
Aco.S516 aagucuggu--GACYUCAGCUCCC----------------------------AUUGCUGACGCCAGAAAGAUCGC---------------------GACGCCG---------------------------GCUA-GUCGAGCACCCACC----------------------CCGUGAUAGGC-------------GGGUGCC-GGCAA-GACA-MCU-GGA-UCGGGAAAGCUACGGCAGC--------------------GCGA-----------------GCUGCUAC-GCUAAUCCCGA--GCGGAGCUGUCGCGGA--------GCGA------UCCGAGGCG-AGCCGU-GUA-GAGCACGCAA-AGGUGUC-GGUCGACUC---------------CCC-------------------GAGUCGGCUUAAGGUACGUGCCAUUC-CCAUCCGAAAGGGUGGCCGCGAACAGUAGCG-CGUAUCA-CGCGAAGGUUUGCGG------GAGGAGGGCCGCC------------CACG------------------------------GGCGGGCCCGCUCU-------------------CGGGG----------------------------GAUGCACCAAG--------------UCCCG--------------------------------AA-G-gccagcagcc
...<<<<<<--<............----------------------------.[[[[[[[^>>>>>>......<<---------------------.......--------------------------->>..-<<<<.<<<<<<...----------------------...........------------->>>>>>>->>>..-<<<<-<<<-...-<<<<<<.<<<...<<<<<<--------------------....----------------->>>>>>..->>>..>>>>>>--<<<<...<<<<.<<<<--------....------>>>>.>>>>-..>>>>-...-[.[[[[[...->>>>>>>-<<<<<<<<<---------------...------------------->>>>>>>>>.......]]]]]].<<.-<<<<<<....>>>>>><<<<<<<<....<<<-.......->>>....>>>>>>>>------<<<..<<<<<<<<------------....------------------------------>>>.>>>>>.>>>.-------------------<<<<<----------------------------...........-------------->>>>>-------------------------------->>-.-]]]]]]]]..
Her.S516 aagucuggu--GGACCUCAGUC------------------------------CUUGCUGACGCCAGAAAGAGUG----------------------GACUU----------------------------CACUA-GUCGAGUACCC----------------------GCAAACUGAUGGG--------------GGGUGCC-GGCAA-GACAACCU-GGA-UCGGGGGAAGCUAUGGGC---------------------GCAA-------------------GCCUAU-GCUGAUCCCGA--GCGGAGUCCC--------------UAAAC------------GGGGCCCGU-GUA-GAGCGCGCAA-AGGUGUC-GGCUGCCUC---------------ACAU------------------GAGGUGGCUUAAGGUACGUGCCAUAC-CCGUGCGAAAGCAUG-CCCACUAUCUNAGCG--CCAUCA-CGCGAA-GAUAGGGGA-----GAGCA----------------------GUGA------------------------------------UGCUC--------------------------------------------------------------------------------------------------------CGGUAUUUGAAUA-G-gccagcagcc
...<<<<<<--<..........------------------------------.[[[[[[[^>>>>>><<<<...----------------------.....---------------------------->>>>..<<<<.<<<<<<----------------------.............-------------->>>>>>>->>>..-<<<<.<<<-...-<<<<<<..<<<.<<<<<<---------------------....------------------->>>>>>->>>..>>>>>>--<<<<.<<<<<--------------.....------------>>>>>>>>>-...-[.[[[[[...->>>>>>>-<<<<<<<<<---------------....------------------>>>>>>>>>.......]]]]]].<<.-.<<<<<....>>>>>-<<<.<<<<<...<<<--......->>>...->>>>>>>>.-----<<<<<----------------------....------------------------------------>>>>>--------------------------------------------------------------------------------------------------------...........>>-.-]]]]]]]]..
Leo_sp-1.S516 aagucuggu--GGACAUUGGCGUCCUGAGGUGUUAAAACCUCUU--------AUUGCUGACGCCAGAAAGAGAAGAAC------------------UUCG-------------------------GUUCUACUA-GUCGACUAUAC----------------------UACAAGCUUUGGG-------------UGUAUAGC-GGCAA-GACAACCU-GGA-UCGGGGGAGGCUAAGGGC---------------------GCAA-------------------GCCUAU-GCUAACCCCGA--GCCGAGCUACUGGAGG--------GCAA------CCCCCAGAUAGCCGGU-GUA-GAGCGCGGAA-AGGUGUC-GGUCAUCCUAU-------------CUG------------------AUAGGUGGCUUGAGGGACGUGCC-GUC-UCAUCCGAAAGGGUG-UUUCUAAGGAGGAGCUCCCAAA-GGGCAAAUCUUAGAAA------AGGGU----------------------GUAU------------------------------------ACCCU-----------------------------------------------------------------------------------------------------------AUAAUUUAAC-G-gccagcagcc
...<<<<<<--<................................--------.[[[[[[[^>>>>>>...<<.<<<<<------------------....------------------------->>>>>.>>.-<<<<.<<<<<<----------------------.............-------------.>>>>>>>->>>..-<<<<.<<<-...-<<<<<<..<<<...<<<<---------------------....------------------->>>>..->>>..>>>>>>--<<<<.<<<<<<<<.<<--------....------>>.>>>>.>>>>>>>>-...-[.[[[[[...->>>>>>>-<<<<<.<<<<<-------------...------------------>>>>>>>>>>.......]]]]]]-<<.-.<<<<<....>>>>>-<<<<<<<<<....<<<<.....->>>>...>>>>>>>>>------<<<<<----------------------....------------------------------------>>>>>-----------------------------------------------------------------------------------------------------------........>>-.-]]]]]]]]..
Leo_sp-2.S516 aagucuggu--GGACAUUGGCGUCCUGAGGUGUUAAAACCUCUU--------AUUGCUGACGCCAGAAAGAGAAGAAC------------------UUCG-------------------------GUUCUACUA-GUCGACUAUAC----------------------UACAAGCUUUGGG-------------UGUAUAGC-GGCAA-GACAACCU-GGA-UCGGGGGAGGCUAAGGGC---------------------GCAA-------------------GCCUAU-GCUAACCCCGA--GCCGAGCUACUGGAGG--------GCAA------CCCCCAGAUAGCCGGU-GUA-GAGCGCGGAA-AGGUGUC-GGUCAUCCUAU-------------CCG------------------AUAGGUGGCUUGAGGGACGUGCC-GUC-UCACCCGAAAGGGUG-UUUCUAAGGAGGAGCUCCCAAA-GGGCAAAUCUUAGAGA------AGGGU----------------------GUAU------------------------------------ACCCU-----------------------------------------------------------------------------------------------------------AUAAUUUAAC-G-gccagcagcc
...<<<<<<--<................................--------.[[[[[[[^>>>>>>...<<.<<<<<------------------....------------------------->>>>>.>>.-<<<<.<<<<<<----------------------.............-------------.>>>>>>>->>>..-<<<<.<<<-...-<<<<<<..<<<...<<<<---------------------....------------------->>>>..->>>..>>>>>>--<<<<.<<<<<<<<.<<--------....------>>.>>>>.>>>>>>>>-...-[.[[[[[...->>>>>>>-<<<<<.<<<<<-------------...------------------>>>>>>>>>>.......]]]]]]-<<.-.<<<<<....>>>>>-<<<<<<<<<....<<<<.....->>>>...>>>>>>>>>------<<<<<----------------------....------------------------------------>>>>>-----------------------------------------------------------------------------------------------------------........>>-.-]]]]]]]]..
Leo_sp-3.S516 aagucuggu--GGACAUUGGCGUCCUGAGGUGUUAAAACCUCUU--------AUUGCUGACGCCAGAAAGAGAAGAAC------------------UUCG-------------------------GUUCUACUA-GUCGACUAUAC----------------------UACAAGCUUUGGG-------------UGUAUAGC-GGCAA-GACAACCU-GGA-UCGGGGGAGGCUAAGGGC---------------------GCAA-------------------GCCUAU-GCUAACCCCGA--GCCGAGCUACUGGAGG--------GCAA------CCCCCAGAUAGCCGGU-GUA-GAGCGCGGAA-AGGUGUC-GGUCAUCCUAU-------------CUG------------------AUAGGUGGCUUGAGGGACGUGCC-GUC-UCACCCGAAAGGGUG-UUUCUAAGGAGGAGCUCCCAAA-GGGCAAAUCUUAGAAA------AGGGU----------------------GUAU------------------------------------ACCCU-----------------------------------------------------------------------------------------------------------AUAAUUUAAC-G-gccagcagcc
...<<<<<<--<................................--------.[[[[[[[^>>>>>>...<<.<<<<<------------------....------------------------->>>>>.>>.-<<<<.<<<<<<----------------------.............-------------.>>>>>>>->>>..-<<<<.<<<-...-<<<<<<..<<<...<<<<---------------------....------------------->>>>..->>>..>>>>>>--<<<<.<<<<<<<<.<<--------....------>>.>>>>.>>>>>>>>-...-[.[[[[[...->>>>>>>-<<<<<.<<<<<-------------...------------------>>>>>>>>>>.......]]]]]]-<<.-.<<<<<....>>>>>-<<<<<<<<<....<<<<.....->>>>...>>>>>>>>>------<<<<<----------------------....------------------------------------>>>>>-----------------------------------------------------------------------------------------------------------........>>-.-]]]]]]]]..
Leo_sp-4.S516 aagucuggu--GGACAUUGGCGUCCUGAGGUGUUAAAACCUCUU--------AUUGCUGACGCCAGAAAGAGAAGAAC------------------UUCG-------------------------GUUCUACUA-GUCGACUAUAC----------------------UACAAGCUUUGGG-------------UGUAUAGC-GGCAA-GACAACCU-GGA-UCGGGGGAGGCUAAGGGC---------------------GCAA-------------------GCCUAU-GCUAACCCCGA--GCCGAGCUACUGGAGG--------GCAA------CCCCCAGAUAGCCGGU-GUA-GAGCGCGGAA-AGGUGUC-GGUCAUCCUAU-------------CUG------------------AUAGGUGGCUUGAGGGACGUGCC-GUC-UCACCCGAAAGGGUG-UUUCUAAGGAGGAGCUCCCAAA-GGGCAAAUCUUAGAGA------AGGGU----------------------GUAU------------------------------------ACCCU-----------------------------------------------------------------------------------------------------------AUAAUUUAAC-G-gccagcagcc
...<<<<<<--<................................--------.[[[[[[[^>>>>>>...<<.<<<<<------------------....------------------------->>>>>.>>.-<<<<.<<<<<<----------------------.............-------------.>>>>>>>->>>..-<<<<.<<<-...-<<<<<<..<<<...<<<<---------------------....------------------->>>>..->>>..>>>>>>--<<<<.<<<<<<<<.<<--------....------>>.>>>>.>>>>>>>>-...-[.[[[[[...->>>>>>>-<<<<<.<<<<<-------------...------------------>>>>>>>>>>.......]]]]]]-<<.-.<<<<<....>>>>>-<<<<<<<<<....<<<<.....->>>>...>>>>>>>>>------<<<<<----------------------....------------------------------------>>>>>-----------------------------------------------------------------------------------------------------------........>>-.-]]]]]]]]..
Leo_sp-5.S516 aagucuggu--GGACAUUGGCGUCCUGAGGUGUUAAAACCUCUU--------AUUGCUGACGCCAGAAAGAGAAGAAC------------------UUCG-------------------------GUUCUACUA-GUCGACUAUAC----------------------UACAAGCUUUGGG-------------UGUAUAGC-GGCAA-GACAACCU-GGA-UCGGGGGAGGCUAAGGGC---------------------GCAA-------------------GCCUAU-GCUAACCCCGA--GCCGAGCUACUGGAGG--------GCAA------CCCCCAGAUAGCCGGU-GUA-GAGCGCGGAA-AGGUGUC-GGUCAUCCUAU-------------CUG------------------AUAGGUGGCUUGAGGGACGUGCC-GUC-UCACCCGAAAGGGUG-UUUCUAAGGAGGAGCUCCCAAA-GGGCAAAUCUUAGAAA------AGGGU----------------------GUAU------------------------------------ACCCU-----------------------------------------------------------------------------------------------------------AUAAUCUAAC-G-gccagcagcc
...<<<<<<--<................................--------.[[[[[[[^>>>>>>...<<.<<<<<------------------....------------------------->>>>>.>>.-<<<<.<<<<<<----------------------.............-------------.>>>>>>>->>>..-<<<<.<<<-...-<<<<<<..<<<...<<<<---------------------....------------------->>>>..->>>..>>>>>>--<<<<.<<<<<<<<.<<--------....------>>.>>>>.>>>>>>>>-...-[.[[[[[...->>>>>>>-<<<<<.<<<<<-------------...------------------>>>>>>>>>>.......]]]]]]-<<.-.<<<<<....>>>>>-<<<<<<<<<....<<<<.....->>>>...>>>>>>>>>------<<<<<----------------------....------------------------------------>>>>>-----------------------------------------------------------------------------------------------------------........>>-.-]]]]]]]]..
Leo_sp-6.S516 aagucuggu--GGACAUUGGCGUCCUGAGGUGUUAAAACCUCUU--------AUUGCUGACGCCAGAAAGAGAAGAAC------------------UUCG-------------------------GUUCUACUA-GUCGACUAUAC----------------------UACAAGCUUUGGG-------------UGUAUAGC-GGCAA-GACAACCU-GGA-UCGGGGGAGGCUAAGGGC---------------------GCAA-------------------GCCUAU-GCUAACCCCGA--GCCGAGCUACUGGAGG--------GCAA------CCCCCAGAUAGCCGGU-GUA-GAGCGCGGAA-AGGUGUC-GGUCAUCCUAU-------------CUG------------------AUAGGUGGCUUGAGGGACGUGCC-GUC-UCACCCGAAAGGGUG-UUUCGAAGGAGGAGCUCCCAAA-GGGCAAAUCUUAGAAA------AGGGU----------------------GUAU------------------------------------ACCCU-----------------------------------------------------------------------------------------------------------AUAAUUUAAC-G-gccagcagcc
...<<<<<<--<................................--------.[[[[[[[>>>>>>>...<<.<<<<<------------------....------------------------->>>>>.>>.-<<<<.<<<<<<----------------------.............-------------.>>>>>>>->>>..-<<<<.<<<-...-<<<<<<..<<<...<<<<---------------------....------------------->>>>..->>>..>>>>>>--<<<<.<<<<<<<<.<<--------....------>>.>>>>.>>>>>>>>-...-[.[[[[[...->>>>>>>-<<<<<.<<<<<-------------...------------------>>>>>>>>>>.......]]]]]]-<<.-.<<<<<....>>>>>-<<<<<<<<<....<<<<.....->>>>...>>>>>>>>>------<<<<<----------------------....------------------------------------>>>>>-----------------------------------------------------------------------------------------------------------........>>-.-]]]]]]]]..
Min.S516-1 aagucuggu--GA---------------------------------------ACUGUUGGUGCCAGAUAGAGCCGCG-----------------GCCCUGAA-----------------------CGGCGGCUA-GUCGAGUGCCC----------------------GU-CAGUGACGGG-------------UGGGCACC-GGCGA-GACAACCU-GGA-UCGGGGGACCCUAAGGGCC--------------------GAGA------------------GGCCUAU-GGAAAUCCCGA--GCAGAGCCU---------------GUAG--------------AGGCCUGU-GUA-GAGCGCGCCA-AGGUGUC-GGUCCGUCCC--------------CGCG-----------------GGGACGGGCUUAAGGUACGUGCCGACC-CCCCGCGAAAGCGGGG-CCUAGGGGAUGAGCACCCGUC-GUGCGACGCCCCUGGGGA----GCAUA---------------------CGGGC------------------------------------UAUGU-----------------------------------------------------------------------------------------------------------AU-----AAC-G--ccagcagcc
..<<<<<<<--<.---------------------------------------.[[[[[[[^>>>>>>>..<<<<<<<-----------------........----------------------->.>>>>>>.-<<<<.<<<<<<----------------------..-..........-------------.>>>>>>>->>>..-<<<<.<<<-...-<<<<<<..<<<...<<<<<--------------------....------------------>>>>>..->>>..>>>>>>--<<<<.<<<<---------------....-------------->>>>>>>>-...-[.[[[[[...->>>>>>>-<<<<<<<<<<--------------....----------------->>>>>>>>>>.......]]]]]].<<.-<<<<<<....>>>>>>-<<<<<<<<....<<<<.....->>>>....>>>>>>>>..----<<<<<---------------------.....------------------------------------>>>>>-----------------------------------------------------------------------------------------------------------..-----.>>-.--]]]]]]]..
Min.S516-2 aagucuggu--GA---------------------------------------ACUGUUGGUGCCAGAUAGAGCCGCG-----------------GCCCUGAA-----------------------CGGCGGCUA-GUCGAGUGCCC----------------------GU-CAGUGACGGG-------------UGGGCACC-GGCGA-GACAACCU-GGA-UCGGGGGACCCUAAGGGCC--------------------GAGA------------------GGCCUAU-GGAAAUCCCGA--GCAGAGCCU---------------GUAG--------------AGGCCUGU-GUA-GAGCGCGCCA-AGGUGUC-GGUCCGUCCC--------------GCG------------------GGGACGGGCUCAAGGUACGUGCCGACC-CCCCGCGAAAGCGGGG-CCUAGGGGAUGAGCACCCGUC-GUGCGACGCCCCUGGGGA----GCAUA---------------------CGGGC------------------------------------UAUGU-----------------------------------------------------------------------------------------------------------AU-----AAC-G-gccagcagcc
..<<<<<<<--<.---------------------------------------.[[[[[[[^>>>>>>>..<<<<<<<-----------------........----------------------->.>>>>>>.-<<<<.<<<<<<----------------------..-..........-------------.>>>>>>>->>>..-<<<<.<<<-...-<<<<<<..<<<...<<<<<--------------------....------------------>>>>>..->>>..>>>>>>--<<<<.<<<<---------------....-------------->>>>>>>>-...-[.[[[[[...->>>>>>>-<<<<<<<<<<--------------...------------------>>>>>>>>>>.......]]]]]].<<.-<<<<<<....>>>>>>-<<<<<<<<....<<<<.....->>>>....>>>>>>>>..----<<<<<---------------------.....------------------------------------>>>>>-----------------------------------------------------------------------------------------------------------..-----.>>-.-]]]]]]]]..
Cbi.S516 ---ucuggu--GACG--------------------------------------UUGCUGGUGCCAGAAAGAGCCGCACCU---------------CCCUAA----------------------AGAAGCGGCUA-GUCGAGCGCCC----------------------GUGCUGUGACGGG-------------UGGGCGCC-GGCGA-GACAACCU-GGA-UCGGGGAAGGCUAAGGGCCC-------------------GAC------------------GGGCCUAC-GCUGAUCCCGA--GCGGAGCCGCC-------------CCU-------------GGCGGCCCGU-GUA-GAGCGCGCAA-AGGUGUC-GGUCCCGGGA--------------GCGA-----------------UCCCGGGGCUUAAGGUACGUGCCAAUC-CCCCGCGAAAGCGGGG-CCCCAGACUGA-GCACCCGUC-GUGCGAGGUCUCGGGG------GGCCACAGGGGC--------------CCAGC----------------------------GCCCCCGUGAGCC----------------------------------------------------------------------------------------------------------GCCGAGAGAAU-G-gccagcagcc
---<<<<<<--<...--------------------------------------[[[[[[[^>>>>>>...<<<<<<..<<---------------......---------------------->>..>>>>>>.-<<<<.<<<<<<----------------------<<..........>------------->>>>>>>>->>>..-<<<<.<<<-...-<<<<<<..<<<...<<<<<<-------------------...------------------>>>>>>..->>>..>>>>>>--<<<<.<<<<<<-------------...------------->>>>>>>>>>-...-[.[[[[[...->>>>>>>-<<<<<<<<<<--------------....----------------->>>>>>>>>>.......]]]]]].<<.-<<<<<<....>>>>>>-<<<<<<<<...-<<<<.....->>>>...>>>>.>>>>------<<<<<<.<<<<<--------------.....---------------------------->>>>>.>>>.>>>----------------------------------------------------------------------------------------------------------.........>>-.-]]]]]]]]..
Cca.S516 aagucuggu--GAAC-------------------------------------GUCGCUGGCGCCAGAGAUAGCCG--------------------CCCUCGGUAAACAA------------------CCGGCUA-GUCGAGCGCUC----------------------GUUGCGUGACGGG-------------UGAGCGC--GGCGA-GACAACCU-GGA-UCGGGGAAGGCUAAGGGCCC-------------------CGC------------------GGGCCUAC-GCUGAUCCCGA--GCAGAGCCAC--------------GCCCG------------GUGGCCUGU-GUA-GAGCGCGCCA-AGGUGUC-GGUCCCGAGG--------------UCU------------------CCUCGGGGCUUAAGGUACGUGCCAAUC-CCCUGCGAAAGCAGGG-CCCUGCGGAACAGCACCCGUC-GUGCGAAGCCGCAGGGA-----GCCCCCCU-------------------CCCC---------------------------------GGGGGGGC------------------------------------------------------------------------------------------------------------GUGUGCUACAG-gccagcagc-
...<<<<<<--<...-------------------------------------[[[[[[[[^>>>>>>...<<<<<--------------------..............------------------.>>>>>.-<<<<..<<<<<----------------------<<<........>>------------->>>>>>>-->>>..-<<<<.<<<-...-<<<<<<..<<<...<<<<<<-------------------...------------------>>>>>>..->>>..>>>>>>--<<<<.<<<<<--------------.....------------>>>>>>>>>-...-[.[[[[[...->>>>>>>-<<<<<<<<<<--------------...------------------>>>>>>>>>>.......]]]]]].<<.-<<<<<<....>>>>>>-<<<<<<<<....<<<<.....->>>>....>>>>>>>>.-----<<<<<<<<-------------------....--------------------------------->>>>>>>>------------------------------------------------------------------------------------------------------------.......>>..-]]]]]]]]]-
Ccocc.S516 aagucuggu--GAAC-------------------------------------GUCGCUGGUGCCAGAGACAGCC--------------------ACCCUCGGUAAACAA------------------GCGGCUA-GUCGAGCGCUC----------------------GACAAGUGACGGG-------------UGAGCGCC-GGCGA-GACAACCU-GGA-UCGGGGAACGCUAAGGGCCC-------------------UCCG-----------------GGGCCUAC-GCCGAUCCCGA--GCAGAGCCAC--------------GGCAG------------GUGGCCUGU-GUA-GAGCGCGCCA-AGGUGUC-GGUCCCGCGGGCG-----------AGG----------------CGCCCCGGGGCUUAAGGUACGUGCCGAAC-CCCCGCGAAAGCGGGG-CCCCGCGGAUGAGCACCCGUC-GUGCGAAGCCGCGGGGA-----GGUCCCCCC------------------CGGGAGUC----------------------------GGGGGGACC--------------------------------------------------------------------------------------------------------------GCC-AGAGG-gccagcagcc
...<<<<<<--<...-------------------------------------[[[[[[[[^>>>>>>...<<<<--------------------...............------------------..>>>>.-<<<<.<<<<<<----------------------<............------------->>>>>>>>->>>..-<<<<.<<<-...-<<<<<<..<<<...<<<<<<-------------------....----------------->>>>>>..->>>..>>>>>>--<<<<.<<<<<--------------.....------------>>>>>>>>>-...-[.[[[[[...->>>>>>>-<<<<<<<.<<<<<-----------...---------------->>>>>>>>>>>>.......]]]]]].<<<-<<<<<<....>>>>>>-<<<<<<<<....<<<<.....->>>>....>>>>>>>>.-----<<<<<<<<<------------------........---------------------------->>>>>>>>>--------------------------------------------------------------------------------------------------------------...-.>>>.-]]]]]]]]].
Ccoch.S516 aagucuggu--GAAC-------------------------------------GUUGCUGGUGCCAGAGAGAGUCG-------------------CCCCUC--UG--CAA-----------------AGCGACUA-GUCGAGCGCCC----------------------GUCACGCGACGGG-------------UGGGCGCC-GGCGA-GACAACCU-GGA-UCGGGGAAGGCUAAGGGCG--------------------CCG-------------------CGCCUAU-GCCGAUCCCGA--GCAGAGCCC---------------AGC---------------GGGCCUGU-GUA-GAGCGCGCCA-AGGUGUC-GGUCCCGGG---------------CGAG-----------------UCCCGGGGCUUGAGGUACGUGCCAAUC-CCCCGCGAAAGCGGGG-UCCCGCGGAGUAGCACCCGUC-GUGCGAAGCCGUGGGAA-----GGCGCCCGGCCC---------------CCAG------------------------------GGGCCGGCGUC------------------------------------------------------------------------------------------------------------GCAGUCAGU-G-gccagcagcc
...<<<<<<--<...-------------------------------------[[[[[[[[^>>>>>>...<<<<<-------------------......--..--...-----------------..>>>>>.-<<<<.<<<<<<----------------------<<<........>>------------->>>>>>>>->>>..-<<<<.<<<-...-<<<<<<..<<<...<<<<<--------------------...------------------->>>>>..->>>..>>>>>>--<<<<.<<<<---------------...--------------->>>>>>>>-...-[.[[[[[...->>>>>>>-<<<<<<<<<---------------....-----------------.>>>>>>>>>.......]]]]]].<<.-<<<<<<....>>>>>>-<<<<<<<<....<<<<.....->>>>....>>>>>>>>.-----<<<<.<<<<<<<---------------....------------------------------>>>>>>>>>>>------------------------------------------------------------------------------------------------------------.......>>-.-]]]]]]]]].
Cin.S516 aagucuggu--GAAC-------------------------------------GUCGCUGGCGCCAGAAAUAGUC-------------------GCCCCUCGGUAAACAA------------------GAGACUA-GUCGAGCGCUC----------------------GU-GCGUGACGGG-------------UGAGCGCC-GGCGA-GACAACCU-GGA-UCGGGGAAGGCUAAGGGC---------------------CCUCGU-----------------GCCUAC-GCUGAUCCCGA--GCAGAGCCG---------------AUC---------------CGGCCUGU-GUA-GAGCGCGCCA-AGGUGUC-GGUCCUGA----------------GAUC-------------------UCAGGGCUUAAGGUACGUGCCAAUC-CCCCGUGAAAACGGGG-CCCUGCGGAGUAGCACCCGUC-GUGCGAAGCCGCAGGGA-----GCCCCCCCC------------------GGAC---------------------------------GGGGGGGC----------------------------------------------------------------------------------------------------------GUACAUCACAG-G-gccagcagcc
...<<<<<<--<...-------------------------------------[[[[[[[[^>>>>>>..<<<<<-------------------................------------------..>>>>>-<<<<.<<<<<<----------------------<<-.........>------------->>>>>>>>->>>..-<<<<.<<<-...-<<<<<<..<<<...<<<<---------------------......----------------->>>>..->>>..>>>>>>--<<<<.<<<<---------------...--------------->>>>>>>>-...-[.[[[[[...->>>>>>>-<<<<<<<<----------------....------------------->>>>>>>>.......]]]]]]..<<-<<<<<<....>>>>>>-<<<<<<<<....<<<<.....->>>>....>>>>>>>>.-----<<<<<<<<.------------------....--------------------------------->>>>>>>>----------------------------------------------------------------------------------------------------------.........>>-.-]]]]]]]]].
Cja.S516 aagucuggu--GAAC-------------------------------------GUCGCUGGUGCCAGAGAGAGCCG--------------------CCCUCGGUAAACAA------------------GCGGCUA-GUCGAGUGCUC----------------------GUUGCGUGACGGG-------------UGAGCGCC-GGCGA-GACAACCU-GGA-UCGGGGAAGGCUAAGGGGCCC------------------CGG------------------GGGCCUAC-GCUGAUCCCGA--GCAGAGCCAG--------------CCCA-------------CUGGCCUGU-GUA-GAGCGCGCCA-AGGUGUC-GGUCCCGAGG--------------UCCU-----------------CCUCGGGGCUUAAGGUACGUGCCAACC-CCCUGCGAAAGCAGGG-CCCUGCGGAGCAGCACCCGUC-GUGCGAAGCCGCAGGGAGCCCCCGCCCCUC-------------------CCCC---------------------------------GAGGGGCG-U------------------GCGC-----------------------------UGUAACAU------------------GCGC--------------------------UGUAACAU-G-gccagcagcc
...<<<<<<--<...-------------------------------------[[[[[[[[^>>>>>>...<<<<<--------------------..............------------------.>>>>>.-<<<<.<<<<<<----------------------<<<........>>------------->>>>>>>>->>>..-<<<<.<<<-...-<<<<<<..<<<....<<<<<<------------------...------------------>>>>>>..->>>..>>>>>>--<<<<.<<<<<--------------....------------->>>>>>>>>-...-[.[[[[[...->>>>>>>-<<<<<<<<<<--------------....----------------->>>>>>>>>>.......]]]]]].<<.-<<<<<<....>>>>>>-<<<<<<<<....<<<<.....->>>>....>>>>>>>>......<<<<<<<<-------------------....--------------------------------->>>>>>>>-.------------------<<<<-----------------------------........------------------>>>>--------------------------......>>-.-]]]]]]]]].
Cka.S516 aagucuggu--GAAC-------------------------------------GUUGCUGGUGCCAGAGAGAGCCA------------------ACCCUCCUGUGGGCGACGGAAGA------------UGGCUA-GUCGCGCGCUC----------------------GAUCAGUGACGGG-------------UGAGCGCC-GGCGA-GACAACCU-GGA-UCGGGGAAGGCUAAGGGCCC-------------------CAAGA----------------GGGCCUAUCGCUGAUCCCGA--GCAGAGCCCCGCGGC---------CAGCGU------GCUGAAGGGCCUGU-GUA-GAGCGCGCCA-AGGUGUC-GGUCCAGGGCGGGCGAGGG-----CGUUCCCU-----CCCUCCCCUCCCAGGGCUUAAGGUACGUGCCAAUC-CCCUGCGAAAGCAGGG-CCCUGCGGAAUAGCACCCGUC-GUGCGAAGCCGUCAGGG-----GAGGACUCCUACCUAGGCG--------AUGG----------------------CGCCUGGGUAGGUGGCCUC---------------------------------------------------------------------------------------------------------UGUGACGAUAGU-G-gccagcagcc
...<<<<<<--<...-------------------------------------[[[[[[[[^>>>>>>...<<<<<------------------.......................------------>>>>>.-<<<<.<<<<<<----------------------<............------------->>>>>>>>->>>..-<<<<.<<<-...-<<<<<<..<<<...<<<<<<-------------------.....---------------->>>>>>...>>>..>>>>>>--<<<<.<<<<..<<<<---------......------>>>>..>>>>>>>>-...-[.[[[[[...->>>>>>>-<<<<<.<<<.<<<.<<<<<-----........----->>>>>>>>.>>>.>>>>>.......]]]]]].<<.-<<<<<<....>>>>>>-<<<<<<<<....<<<<.....->>>>....>>>>>>>>.-----<<<<<<<<<<<<<<<<<<<--------....---------------------->>>>>>>>>>>>>>>>>>>---------------------------------------------------------------------------------------------------------..........>>-.-]]]]]]]]].
Cpa.S516 aagucuggu--GAAC-------------------------------------GUUGCUGGCGCCAGAAAGAGCCAC-------------------CCUCUGGUAAAUAAA-----------------GUGGCUA-GUCGAGUGCUC----------------------AUAAUGUGACGGG-------------UGAGCACC-GGCGA-GACAACCU-GGA-UCGGGGGAGGCUAAGGGUCA-------------------CUGC------------------GGCCUAU-GCUAAUCCCGA--GCAGAGCCAG--------------UACUU------------CUGGCCUGU-GUA-GAGCGCGCCA-AGGUGUC-GGUCCCGAGG--------------UCU------------------UCUCGGGGCUUAAGGUACGUGCCAACC-CCCUGUGAAAACAGGG-CCCUGCGGAGUAGCACCCGUC-GUGCAAUGCCGUAGGGA-----GCCUUUCU-------------------GAAA---------------------------------GGGAAGGC----------------------------------------------------------------------------------------------------------GCUAUAAAAAU-G-gccagcagcc
...<<<<<<--<...-------------------------------------[[[[[[[[^>>>>>>...<<<<<<-------------------...............----------------->>>>>>.-<<<<.<<<<<<----------------------<<..........>------------->>>>>>>>->>>..-<<<<.<<<-...-<<<<<<..<<<...<<<<<.-------------------....------------------>>>>>..->>>..>>>>>>--<<<<.<<<<<--------------.....------------>>>>>>>>>-...-[.[[[[[...->>>>>>>-<<<<<<<<<<--------------...------------------>>>>>>>>>>.......]]]]]].<<.-<<<<<<....>>>>>>-<<<<<<<<....<<<<.....->>>>....>>>>>>>>.-----<<<<<<<<-------------------....--------------------------------->>>>>>>>----------------------------------------------------------------------------------------------------------.........>>-.-]]]]]]]]].
Cpro.S516 aagucuggu--GAAC-------------------------------------GUUGCUGGUGCCAGAGAGAGCUAC------------------CCCUCCGUUGAACAGUCCCCCUAAAA-------GUAGCUA-GUCGAGCGUUC----------------------AAUCUGUGACGGG-------------UGAGCGCC-GGCGA-GACAACCU-GGA-UCGGGGAAGGCUAAGGGCCC-------------------CAAGCU---------------GGGCCUAC-GCUGAUCCCGA--GCAGAGCUCGCGCUU---------GCGG--------AAGCGCGGGCCUGU-GUA-GAGCGCGCCA-AGGUGUC-GGUCCCAGUAGCGGGGGGAGGUUUCUCUUUUCCAACAAACCUCCCCCCCGGGGCUUAAGGUACGUGCCAAUC-CCCCGCGAAAGCUGGG-CCCCGCGGAGCAGCACCCGUC-GUGCGAAGCCGUGGGGG-----GGGCCUGC-------------------CCGG---------------------------------GCAGGCUU--------------------------------------------------------------------------------------------------------GUAGAACAUUAGU-G-gccagcagcc
...<<<<<<--<...-------------------------------------[[[[[[[[^>>>>>>...<<<<<<------------------..........................------->>>>>>.-<<<<.<<<<<<----------------------<............------------->>>>>>>>->>>..-<<<<.<<<-...-<<<<<<..<<<...<<<<<<-------------------......--------------->>>>>>..->>>..>>>>>>--<<<<.<<<<<<<<<<---------....-------->>>>>>>>>>>>>>-...-[.[[[[[...->>>>>>>-<<<<<<......<<<<<<<<<<<<............>>>>>>>>>>>>.>>>>>>.......]]]]]].<<.-<<<<<<....>>>>>>-<<<<<<<<....<<<<.....->>>>....>>>>>>>>.-----<<<<<<<<-------------------....--------------------------------->>>>>>>>--------------------------------------------------------------------------------------------------------...........>>-.-]]]]]]]]].
Cram.S516 aagucuggu--GAAC-------------------------------------GUUGCUGGUGCCAGAGAGAGCUAC------------------CCCUCUGU-GGGCGAUGGAAGA------------UAGCUA-GUCGAGCGCUC----------------------GAUCAGUGACGGG-------------UGAGCGCC-GGCGA-GACGACCU-GGA-UCGGGGAAGGCUAAGGGCC--------------------CCAAGCU---------------GGCCUAC-GCUGAUCCCGA--GCAGAGCCCCGCGGC---------CAGUGU-----GCCGGGAGGGCCUGU-GUA-GAGCGCGCCA-AGGUGUC-GGUCCAGAGGGGGGCGGGGGCGA-NNNNNNNNN-----UCCCCCCCCCCAGGGCUUAAGGUACGUGCCAAUC-CCCUGCGAAAGCAGGG-CCCUGCGGAGUAGCACCCGUC-GUGCGAAGCCGCGGGGG-----AGGACGCCCUGAGCG------------AUGG---------------------------UGCCUGGGUGGCCU--------------------------------------------------------------------------------------------------------GUGACAACAUAGU-G-gccagcagcc
...<<<<<<--<...-------------------------------------[[[[[[[[^>>>>>>...<<<<<-------------------........-.............------------>>>>>.-<<<<.<<<<<<----------------------<............------------->>>>>>>>->>>..-<<<<.<<<-...-<<<<<<..<<<...<<<<<--------------------.......--------------->>>>>..->>>..>>>>>>--<<<<.<<<<..<<<<---------......----->>>>...>>>>>>>>-...-[.[[[[[...->>>>>>>-<<<<<...<<<<<<.<<<<<...-.........----->>>>>>>>>>>.>>>>>.......]]]]]].<<.-<<<<<<....>>>>>>-<<<<<<<<....<<<<.....->>>>....>>>>>>>>.-----<<<.<<<<<...<<<------------....--------------------------->>>..>>>>>.>>>--------------------------------------------------------------------------------------------------------...........>>-.-]]]]]]]]].
Csob.S516 aagucuggu--GAAC-------------------------------------GUUGCUGGCGCCAGAGAGAGCCGC------------------CCCUCCGU-AAACGAA-----------------GCGGCUA-GUCGAGUGCUC---------------------GUGGCAGUAACGGG-------------UGAGCACC-GGCGA-GACAACCU-GGG-UCGGGGGAGGCUAAGGGCC--------------------CCG-------------------GGCCUAU-GCUAAUCCCGA--GCAGAGCCG---------------AUUUCCUA----------CGGCCUGU-GUA-GAGCGCGCUA-AGGUGUC-GGUCCCGGGGCUCCCG--------CCAG---------CGGGAGUCCCCCGGGGCUUGAGGUACGUGCCAAUC-CCCUGCGAAAGCAGGG-CCCUGCGGAUUAGCACCCGUU-AUGCGAAGCCGCAGGGGG----CCUC-----------------------CGAGC------------------------------------GAGG--------------------CAGUGAU--------------------------CAU--------------------AUUGCUG-----------------------------UAAAU-G-gccagcagcc
...<<<<<<--<...-------------------------------------[[[[[[[[^>>>>>>...<<<<<<------------------........-.......----------------->>>>>>.-<<<<.<<<<<<---------------------<<...........>------------->>>>>>>>->>>..-<<<<.<<<-...-<<<<<<..<<<...<<<<<--------------------...------------------->>>>>..->>>..>>>>>>--<<<<.<<<<---------------........---------->>>>>>>>-...-[.[[[[[...->>>>>>>-<<<<<<<<<<<<<<<<--------....--------->>>>>>..>>>>>>>>>>.......]]]]]].<<.-<<<<<<....>>>>>>-<<<<<<<<....<<<......-.>>>....>>>>>>>>..----<<<<-----------------------.....------------------------------------>>>>--------------------<<<<<<<--------------------------...-------------------->>>>>>>-----------------------------...>>-.-]]]]]]]]].
Co_sp-1.S516 aagucuggu--GAAC-------------------------------------GUUGCUGGUGCCAGAGAGAGCCGC------------------CCCUCCG-UAAAACGU-----------------GCGGCUA-GUCGAGUGCUC---------------------CGGUCAGUGGCGGG-------------UGAGCACC-GGCGA-GACAACCU-GGG-UCGGGGAAGGCUAAGGGCCC-------------------CCUG-----------------GGGCCUAU-GCUGAUCCCGA--GCAGAGCCGCGCC-----------GCGA-----------GGCCGGCCUGU-GUA-GAGCGCGCCA-AGGUGUC-GGUCCGGGGGG-------------GGGGUUCGCA----------CCCCCCGGGCUUAAGGUACGUGCCAAUC-CCCUGCGAAAGCAGGGCCCUGCGGACGGAGCACCCGUC-AUGCGAAGCCGCAGGG------GGCAGGGGCGCCC--------------CGGC----------------------------GGGCGCCCCCGCC---------------------------------------------------------------------------------------------------------GUGAACGACAGU-G-gccagcagcc
...<<<<<<--<...-------------------------------------[[[[[[[[^>>>>>>...<<<<<<------------------.......-........----------------->>>>>>.-<<<<.<<<<<<---------------------..............-------------.>>>>>>>->>>..-<<<<.<<<-...-<<<<<<..<<<...<<<<<<-------------------....----------------->>>>>>..->>>..>>>>>>--<<<<.<<<<.<<<-----------....----------->>>>>>>>>>>-...-[.[[[[[...->>>>>>>-<<<<<<<<<<<-------------..........---------->>>>>>>>>>>.......]]]]]].<<.-<<<<<<....>>>>>><<<<<<<<.....<<<......-.>>>....>>>>>>>>------<<<<<<<<<<<<<--------------....---------------------------->>>>>>>>>>>>>---------------------------------------------------------------------------------------------------------..........>>-.-]]]]]]]]].
Cya.S516 aagucuggu--GAAC-------------------------------------GUUGCUGGUGCCAGAGAGAGCCGC------------------CCCUCCG-UAAACCGU-----------------GCGGCUA-GUCGAGUGCUC---------------------GCGUCAGUGGCGGG-------------UGAGCACC-GGCGA-GACAACCU-GGG-UCGGGGAAGGCUAAGGGCCC-------------------CCGG-----------------GGGCCUAU-GCUGAUCCCGA--GCAGAGCCGUGCU-----------GCGCA----------AGCCGGCCUGU-GUA-GAGCGCGCCA-AGGUGUC-GGUCCAGGGGAG------------UCGC---------------CUCCCCGGGGCUUAAGGUACGUGCCAAUC-CCCUGCGAAAGCAGGGCCCUGCGGACGGAGCACCCGUC-AUGCGAAGCCGCAGGGG-----GGCAGGCGGCCCC------------UCCG-------------------------------GGGGCCCCUGCC---------------------------------------------------------------------------------------------------------GUCAACAACAGU-G-gccagcagcc
...<<<<<<--<...-------------------------------------[[[[[[[[^>>>>>>...<<<<<<------------------.......-........----------------->>>>>>.-<<<<.<<<<<<---------------------<<...........>------------->>>>>>>>->>>..-<<<<.<<<-...-<<<<<<..<<<...<<<<<<-------------------....----------------->>>>>>..->>>..>>>>>>--<<<<.<<<<.<<<-----------.....---------->>>>>>>>>>>-...-[.[[[[[...->>>>>>>-<<<<<.<<<<<<------------....--------------->>>>>>.>>>>>.......]]]]]].<<.-<<<<<<....>>>>>><<<<<<<<.....<<<......-.>>>....>>>>>>>>.-----<<<<<<.<<<<<<------------....------------------------------->>>>>>>>>>>>---------------------------------------------------------------------------------------------------------..........>>-.-]]]]]]]]].
Hpa.S516 aagucuggu--AAAC------------------------------------GUUCGCUGGUGCCAGAAAUAGCCA------------------GCCCU--GUAAAA----------------------UGGCUA-GUCGAGUGCUC----------------------GAUCUGUAGCGGG-------------UGAGCACC-GGCGA-GACAACCU-GGA-UCGGGGAAGCCUAAGGGACCU------------------GUCACA--------------GGGUCCUAU-GGUGAUCCCGA--GCAGAGCC----------------GCAA---------------GGCCUGU-GUA-GAGCACGCUA-AGGUGUC-GGUCCCGUC---------------CUCUGC----------------GGCGGGGCUUAAGGUACGUGCCAAUC-CCCUGCGAAAGCUGGG-CCCUAGGGAGUAGCACCCGCU-GUGCGAAGCUCUAGGGGA----CCUGUGCC------------------CGCCGU--------------------------------GGCGCAGGCCGUCC--------------GACAGUC--------------------------GUCA------------------GACUGCUC--------------------------ACUAUAAU-G-gccagcagcc
...<<<<<<--<...------------------------------------..[[[[[[[^>>>>>>..<<<<<<------------------.....--......---------------------->>>>>>-<<<<.<<<<<<----------------------<............------------->>>>>>>>->>>..-<<<<.<<<-...-<<<<<<..<<<...<<<<<<<------------------......-------------->>>>>>>..->>>..>>>>>>--<<<<.<<<----------------....--------------->>>>>>>-...-[.[[[[[...->>>>>>>-<<<<<<<<<---------------......---------------->>>>>>>>>.......]]]]]].<<.-<<<<<<....>>>>>>-<<<<<<<<....<<<<.....->>>>....>>>>>>>>..----<<<<<<<<------------------......-------------------------------->>>>>>>>......--------------<<<<<<<--------------------------....------------------>>>>>.>>--------------------------......>>-.-]]]]]]]]..
Bhy.S516 --gucuggu--GAA---------------------------------------CUGUUGGUGCCAGAGAUAGCUGC--------------------GGCCCGCAA--------------------CGGCAGCUA-GUGG-GUGCUC----------------------GAUCUGUGACGGG-------------UGAGCACC-UGCGA-GACAACCU-GGA-UCGGGGGACCCUAAGGGCGC-------------------CACGU----------------GCGCCUAU-GGAAAUCCCGA--GCAGAGCC----------------GCAA---------------GGCCUGU-GUA-GAGCGCGCCA-AGGUGUC-GGUCUGAC----------------UUCU-------------------GUCAGGCUUGAGGUACGUGCCGAUC-CCCAGCGAAAGCUGGG-CCCAGUGGACUAGCACCCGUC-GUGCGAAGCCGCUGGG------GAGUCC---------------------GUGAU----------------------------------GGACUU----------------------------------------------------------------------------------------------------------UAGCGACAAAUCG-gccagcagc-
--.<<<<<<--<..---------------------------------------[[[[[[[^>>>>>>..<<<<<<<--------------------.........--------------------..>>>>>>>-<<<<-<<<<<<----------------------<............------------->>>>>>>>->>>..-<<<<.<<<-...-<<<<<<..<<<...<<<<<<-------------------.....---------------->>>>>>..->>>..>>>>>>--<<<<.<<<----------------....--------------->>>>>>>-...-[.[[[[[...->>>>>>>-<<<<<<<<----------------....------------------->>>>>>>>.......]]]]]].<<.-<<<<<<....>>>>>>-<<<<<<<<.<<.<<<<.....->>>>..>>>>>>>>>>------<<<<<<---------------------.....---------------------------------->>>>>>----------------------------------------------------------------------------------------------------------.........>>..-]]]]]]]].-
Gph.S516 ---ucuggu--GAAAUAAU----------------------------------CUGCUGACGCCAGAGAUAGUUGGGCCUGC---------------CAAGU---------------GCAGGUUAUGCUGACUA-GUUGAGUCUACUU-------------------UUUCGCGUGAUGGC------------AAGUAGAUGAGGCAA-GACAACCU-GGG-UCGGGGAAGGCUAAGGAC---------------------UGCAAC-----------------GUCUAU-GCUAAUCCCGA--GCAGAGUGCGCGAGUA--------GUGA------UACUCGAUGCACCUGU-GUA-GAGCACGCUA-AGGUGUC-GGUCGCGCUUGGAU----------GCAU--------------AUCCAAGGCGGCUUAAGGUACGUGCCGUUC-CCACUUGAAAGAGUGUUUGUAGUCGACGCAG-UCCAUCGCUGCGCUAGACUACAAA-----GAAGU---------------------AGCC-------------------------------------ACUUC-GG-----------------ACAAAGAGAU-----------------------UGCAC----------------AUCUCUUGU-------------------------------AAU-G-gccagcagcc
---<<<<<<--<.......----------------------------------[[[[[[[^>>>>>>..<<<<<<<<<<<<<---------------.....--------------->>>>>>....>>>>>>>-<<<..<<<<<<<<-------------------....<<......>>------------>>>>>>>>..>>>..-<<<<.<<<-...-<<<<<<..<<<...<<<<---------------------......----------------->>>>..->>>..>>>>>>--<<<<.<<<<<<<<<<<--------....------>>>>>>.>>>>>>>>>-...-[.[[[[[...->>>>>>>-<<<<<<.<<<<<<<----------....-------------->>>>>>>>>>>>>.......]]]]]]<<<.-.<<<<<....>>>>>.<<<<<<<<..<<<<<-<.....>>>>>>...>>>>>>>>.-----<<<<<---------------------....------------------------------------->>>>>-..-----------------<<<<.<<<<<-----------------------.....---------------->>>>>>>>>------------------------------->>>-.-]]]]]]]]..
Cka.L2563 ucacccacu--AGA---------------CCACUGGAGUCUACAGAAUGUUUGUUUCCAUUGGUGGGAACAGUCGGUGCUGCUGGUCCGUCGUCGUCCCCCG-------GGGACGCGCGAACCUCGCCCGGCUA-GUCGA--UG-UGGC------------------AUAC-ACCUGCAGG--------------CGUCACACGGCGA-CACAACCU-GGU-UCGGGGGAGGCUAAGGGAGACCCGACCUGA---------CCUGC--------UCAGGCGGGCUCCUAG-GCUAAUCUCGA-GUACGAGCCGCGGCGAGA-------GCGA-----UCUCCCGUCAGGCCUAC-GUA-GAGCGCGGAA-AGGUGUG-GGCGAUCCUC--------------GGUACA----------------GAGGUCGCUUAAGGGACGUGCCAGAC-CCUCGGGAAACCGAG-UCACGGAGGGUGAGGACCUGCAGUCU-GAGCCCCUGUGA------AGGC--GCACCGCUCCUCUGCGAGCG--ACGAGCCGCGGCAGCAAAUGGCCGCGGC---------GA-GCCUGGUAAAGUG-----------CCCUGGAGG------------------------AGAC-----------------CCUCCAGGG-----------------------------AGAUC-G-aauagggaac
...<<<<<<--<..---------------........................[[[[.[[^>>>>>>...<<<<<<.<<....<<<.<<.<<.<<<<<<...------->>>>>>>>>>.>>>..>>>>>>>>.-<<<<.--<<-<<<<------------------....-.........--------------.>>>>>>>>>>..-<<<<.<<<-...-<<<<<<..<<<...<<<<<.<<<<.<<<<<---------.....-------->>>>>>>>>>>>>>..->>>..>>>>>>-<<<.<.<<<<<<<.<<<<-------....----->>>>>>>>..>>>>>>>-...-[.[[[[[...->>>>>>>-<<<<<.<<<<--------------......---------------->>>>>>>>>.......]]]]]].<<.-.<<<<<....>>>>>-<<<<<<.<<<<..<<<<.....>>>>-..>>>>>>>>>>------<<<<--....<<<<<......>>>>>--....<<<<<<<<........>>>>>>>>---------..->>>>.........-----------<<<<<<<<<------------------------....----------------->>>>>>>>>-----------------------------...>>-.-]]].]]]]..
Cpro.L2563 ucacccacu--AGA----------------(87)------------------UUCCCAAUUGGUGGGAAUAGUCGAGCCCGGCCGUCU-------GCUCAAG--------------GGACGGCCGCACCGGCUA-GUCGA--UG-UGGC------------------AUACCACCUGCAGG--------------CGUCACACGGCAA-CACAACCU-GGU-UCGAGGGAGGCUAAGGGCGUCGACGCUGAGC--------GUAGAA--------GCUCACGGCGCCUAC-GCUAAUCUCGA--GUAGAGCCGCGGCGAGA-------GCGA-----UCUCCCG-GCGGCCUAC-GUA-GAGCGCGGAA-AGGUGUG-GGCGGCGCUC--------------GAACA-----------------GAGGCCGCUUAAGGGACGUGCCAGAC-CCUCGGGAAACCGAG-CCGCGGACGGGGAGGACCUGCAGUCC-GAGCCUCCGCGG------GGGC--GUACAGCUCUUC-GCGAGC--AGCAAGCUGGGGAGCCAAGUGACCCCAGC---------GA-GCCCGGUACAG-------------CCCUAGAGG------------------------AAAAGA----------------CUCUAGGG--------------------------GAAAAAAC-G-aauagggaac
...<<<<<<--<..----------------~~~~------------------[[[[[[[[^>>>>>>..<<<<<<....<<<<<<<<<-------.......-------------->>>>>>>>>...>>>>>>-<<<<.--<<-<<<<------------------..............--------------.>>>>>>>>>>..-<<<<.<<<-...-<<<<<<..<<<...<<<<<<<<....<<<<<--------......-------->>>>>>>>>>>>>..->>>..>>>>>>--<<<<.<<<<<<<.<<<<-------....----->>>>>>.->>>>>>>>>-...-[.[[[[[...->>>>>>>-<<<<<<.<<<--------------.....----------------->>>>>>>>>.......]]]]]].<..-.<<<<<....>>>>>-<<<<<<.<<<<..<<<<.....>>>>-..>>>>>>>>>>------<<<<--.....<<<<...-..>>>>--.....<<<<<<<.<<...>>..>>>>>>>---------..->>>>.......-------------<<<<<<<<.------------------------......---------------->>>>>>>>--------------------------.......>-.-]]]]]]]]].
Co_sp-3.L2563 ucacccacu--AGA----------------------CGAGAGAUUCUCGAUAGUUUCCAUUGGUGGGGGUAGCCGG-----GUCCUG---------CUCG-----------------CAGGGCUACGCCGGCUA-GUCGAAUCA-UGACUUUCU--------------------CUGCAGG--------------UGUCAUGCGGCAA-CACAACCU-GGA-UCGGGGGAGGCUACGGGCU--------------------GCAC------------------AGCCUAU-GCUAAUCCCGA--GGAGAGCC-CUGUAGGA-------GCGA-----UCCUGCAGU-GGCCUCU-GUA-GAGCGCGGAA-AGGUGUG-GGUGACUCUCGCAGC---------ACG--------------GCUGCGAGGUUGCUUAAGGGACGUGCCAAAC-CCACGGGAAACCGUG-CUGGAUG-CGAA-GAGCCUGCAGCUC-AGAU-CAUCCAG------GUGGCUU--------CGAGG---------------CCGGGAGGAAAUGCCCGG-----------AAGAGCCUGGUAAAC-------------CACU-----------------------------UUUAC---------------------AGUG------------------------------CUUU-G-aauagggaac
...<<<<<<--<..----------------------.................[[[[.[[^>>>>>>..<<<<<<<-----<<<<<<---------....----------------->>>>>>....>>>>>>>-<<<<...<<-<<<<..<<<--------------------....>>>--------------.>>>>>>>>>>..-<<<<.<<<-...-<<<<<<..<<<...<<<<<--------------------....------------------>>>>>..->>>..>>>>>>--<<<<.<<<-<<<<<<<<-------....----->>>>>>>>.->>>>>>>-...-[.[[[[[...->>>>>>>-<<<<<<.<<<<<<<<---------...-------------->>>>>>>>>>>>>>.......]]]]]]<<<.-.<<<<<....>>>>>-<<<<<<<-....-<<<<.....>>>>-....->>>>>>>------<.<<<<<--------.....---------------<<<<<........>>>>>----------->>..>>>>.......-------------<<<<-----------------------------.....--------------------->>>>------------------------------.>>>-.-]]].]]]]..
Ggr.L2563 ucacccacu--AAG---------------------------------------UUCCUAUUGGUGGUAAUAGUCGGGGGUCGGCCCAG--------GUA-------------CUGGGUGAGAUCAUGCCGGCUA-GUCGA--UA-CAGUUUUAUACC---------------CACUGCAGG--------------UGCUGUACGGCGA-CACAACCU-GGU-UCGGGGGAGGCUAAGGCGAGGU-----------------UAAUUGUAUU----------GCACGCUAU-GCUAAUCCCGA--GCGGAGYGCU--------------GGGCGCA------------GGCCCGU-GUA-GAGCGCGGAA-AGGUGUG-GGCUCAU-----------------UUG---------------------AUGGGCUUAAGGGACGUGCCAAAC-CCUCGGGAAACCGAG-CCCCAUGCUCAA-GCGCCUGCAGCGU-AAAGGCAUAGGG------GGCGUACCGCUCUCGGUCAAACGAGACGACAAGCUUUGGAGGGAAAUAUCCAAAGC---------GA-GCCUGGUA----------------UUCUUCGGAGAA---------------------UCAUUUUUGUUACUAGUCUUCUCCGGGGAA-------------------------------GCU-G-aauagggaac
....<<<<<--<<.---------------------------------------[[[[[[^^>>>>>...<<<<<<<.<<<<.<<<<<<--------...------------->>>>>>..>>>>...>>>>>>>-<<<<.--<<-<<<<.....<<<---------------.......>>-------------->>>>>>>>>>>..-<<<<.<<<-...-<<<<<<..<<<...<<<<..<<-----------------..........---------->>.>>>>..->>>..>>>>>>--<<<<...<<<--------------.......------------>>>>>>>-...-[.[[[[[...->>>>>>>-<<<<<<<-----------------...--------------------->>>>>>>.......]]]]]].<.<-.<<<<<....>>>>>-<<<<<<<<<...-<<<<.....>>>>-...>>>>>>>>>------<<<....<<.<<<<<......>>>>>>>....<<<<<<<<........>>>>>>>>---------..->>>.....----------------<<<<<<<<<<<<---------------------..................>>>>>>>>>>>>------------------------------->.>-.-]]]]]]]]..