no classified IE alignment


                          P1                     P10   P1'        P2                                        P2'  P2.1                                                                                         P2.1'  P3           P4      P5    P5a                        P5a'    P5'    P4'  P6                                     P6'       P7        P3' P8                               P8'          P7'  P9.0  P9             P9' P9.1                          P9.1'      P9.2                                P9.2'        P9.3                                           P9.3'           P9.0' P10'
Lab.S516            caagucuggu--GAACCUA(31)UUUC--GCUGACGCCGGAC-AGAGUCGGUCUC-----------(130)-----GGGAC-GUGA-CGACUAGUCGAGUACUCGAGCC-----------------------GUGAUG----------------------------------------GGUGGGUACCGGCGAGACAACCUGGA--UCGGGGAAGGCUCGAGCC-----------UCU---------GGCUCUGUGCUGAUCCCGAGCGGAGCCGAACUGCCCGUGGAUAAA-CCGCGACGGUGGCCCGUGUAGAGCACGCAAAGGUGUCGGCCGACUC-------------------GGGUCGGCUUAAGGGACGUGCCAUC-CCCACUCC--AACA-GGGGUGCCGCUGGC-AGAAGCGC-CCAUCGCGCGAGGGCCAGCCGG--GGCGUC-------------GAUC------------GACGUC-GG--GGGGAAUCUGUUAGU------------UGGUAGUU------------ACUCAGUCCCC--GAAAAUCGAG--gccagcagccg
                    ...<<<<<<<--<......~~~~....--[[[[.^>>>>>>>-..<<<<<<<<<<-----------~~~~~----->>>>>-....->>>>>.<<<<.<<<<<<..<<<-----------------------......---------------------------------------->>>>>>>>>>>>>..<<<<.<<<...--<<<<<<..<<<.<<<<<<-----------...--------->>>>>.>.>>>..>>>>>><<<<.<<<..<<<<..<<<<<.....->>>>>.>>>>>>>>>>>...[.[[[[[...>>>>>>><<<<<<<..-------------------..>>>>>>>.......]]]]]].<<-..<<<<<<--....->>>>>><<<<<<<<-....<<<<-.....>>>>....>>>>>.>>>--<<<<<<-------------....------------>>>>>>-..--<<<<<..<<<..<<<------------........------------>>>>>>>>>>>--.......>>.--].]]]].....
Rbo.S516            caagucuggu--GAACGAG(17)CAC--UGCUGACGCCAGA-AAUAGCGGGGUU------------------------------UCCCCGCUGGUCGAGCACCCGAGUCCCC------------------GCGUGGUA----------------------------------------GGGGGGUGCCGGCGAGACAACCUGGG--UCGGGGGAGGUCUUGGGUGAGCCGCUU-AAUU----AAGCGGUCCUCCUGCUAAUCCCGAGCGGAGCGCCC----------CACG---------GGGCGCCCGUGUAGAGCGCGCACAGGUGUCGGCCAGCCUC------------------UGUCUGGCUUAAGGGACGUGCCAUC-CCCGCUC---GAAA--GAGCGCCUCGGGUCC-AAGCUCCCUGCUCU-GCGAGGCCCCGAGGAGCCCCGAUCAUCUGGGGU--UGG--GCCCUCGAGUUUCGGGG----------------------------------------------------------------GAUUUUUAGAG--gccagcagccg
                    ....<<<<<<--<......~~~~...--[[[[[.^>>>>>>-...<<<<<<<..------------------------------.>>>>>>>.<<<<.<<<<<<.....<<<------------------........---------------------------------------->>>>>>>>>>>>>..<<<<.<<<...--<<<<<<..<<<...<<<...<<<<<<<-....---->>>>>>>...>>>>>>..>>>>>><<<<.<<<<<<----------....--------->>>>>>>>>>...[.[[[[[...>>>>>>><<<<<<<...------------------.>.>>>>>>.......]]]]]].<<-..<<<<<---....-->>>>><<<<<<<.<<-..<<..........->>..>>.>>>>>>>..<<<<<<...<<.<<<<<--...-->>>>>.>>...>>>>>>----------------------------------------------------------------........>>.--].]]]]]....
Cpil.S516           caagucuggu--GGACGUU(06)CCA--UGCUGACGCCAGAC-AGAGUGGGCUUU---------------------------CGGGCCCGCUAGUCGAGCACCC-AGUC-----------------------GUGAUA----------------------------------------GGCGGGUGCCGGCAAGACAACCUGGA--UCGGGGAAGGCUAAGGGGCU--------CUUC-------GGCGCCCUACGCUGAUCCCGAGCGGAGCACUC-----------------------CGGUGCCCGUGUAGAGCGCGCAAAGGUGUCGGCUGUGA---------------------AGACAGCUUGAGGGACGUGCCAUU-CCCGCCC---GAAA--GGGUGUCGACCACU-GGAGCA-CCUAUC-AUGCAAAAGUGGUCGG--GGAC--------------AACUA--------------GUCC-GG---------------------------------------------------------------UAAAUGCAG--gccagcagccg
                    ...<<<<<<<--<......~~~~...--[[[[[.^>>>>>>>-..<<<<<<<<..---------------------------..>>>>>>>>.<<<<.<<<<<<-.<<<-----------------------......---------------------------------------->>>>>>>>>>>>>..<<<<.<<<...--<<<<<<..<<<..<<<<<<<--------....------->>>.>>>>..>>>..>>>>>><<<<.<<<<..-----------------------..>>>>>>>>...[.[[[[[...>>>>>>><<<<<<..---------------------..>>>>>>.......]]]]]].<.-..<<<<<---....-->>>>>.<<<<<<<<-...<<<-......-.>>>...>>>>>>>>.--<<<<--------------.....-------------->>>>-..---------------------------------------------------------------.......>.--].]]]]]....
Mju.S516            caagucuggu--GGACGUC(06)CAA--UGCUGGCGCCAGA-AGCAGUGAGGCCC----------------------------CAACUCACUAGUCGAUGCACCCACCAA--------------------CAGAGAG-----------------------------------------GGCGGGUGCCGGCAAGACGACCUGGU--ACGAGGGACCCCUUAACGGCCGCC---UAUAGGU------GGGGCCGAAGGCAAUCUCGUGGCGACCUCCCUCA------------------CACGGAGGCGUCGUAACGCGCGGAAAGGCGUCGGUCGCGAU--------------------AAGCGGCUUAAGGAACGUGCUAGA-CCCGAGG---GAAA--CCUCGCUCCUUCUGAUCAGCC-CCCUCU-CGGCGAAGCAGUGGAGGCGCCCG-------------GCGAA------------CGGGUGUGG------------------------------------------------------ACGAGUCAAUGAAAAUCG--gccagcagccg
                    ....<<<<<<--<......~~~~...--[[[[[[^>>>>>>-...<<<<<<....----------------------------...>>>>>>.<<<<..<<<<<<.<<..--------------------.......----------------------------------------->>.>>>>>>>>>>..<<<<.<<<...--<<<<<<....<<<<..<<<<<.<<---.......------>>>>>>>>>>>...>>>>>><<<<.<<<<<....------------------...>>>>>>>>>...[.[[[[[...>>>>>>><<<<<<...--------------------..>>>>>>.......]]]]]].<<-..<<<<<---....-->>>>><<<<..<<<....<<<-......-.>>>....>>>.>>>>.<<<<<<-------------.....------------>>>>>>...------------------------------------------------------...............>>.--]]]]]]]....
Bzo.S516            caagucuggu--GAACAUU(09)CUC--UGCUGACGCCAGA-GAUAGUAGGGUCCUCCCCCCCU-----CCCGGGGGAGGAUUACGCCUGCUAGUCGAGCACCCAUGUUG-----------------------UAG-------------------------------------CGAUGGGUGGGUGCCGGCGAGGUGACCUGGU--ACGGGGAAGCCUACGGGUUG--------GUUC---------CAACCUACGGUAAUCCCGUGGCGAGUCCGCCGCAGGGGGUCGAACCCCCUCCGGCGGGCCGUCGUAACGCGCGGAAAGGCACCGGCUGCCACCCCUG---------CGGGGGGGGGGGCUCAAGGGACGUGCUGU--CCCAUCC---GAAA--GGAUGCCCUCGGCUGG-AGCAC-CCAUC-GUGCAAAGGUCGAGGGGGGCCGUGGCCCCCG------GGGA--CGGGGCGCUGCGGGUCCGG------------------------------------------------------------GUA-UGAAGACG--gccagcagccg
                    ....<<<<<<--<......~~~~...--[[[[[.^>>>>>>-...<<<<<<<<<<<<<<<<...-----...>>>>>>>>>>....>>>>>>.<<<<.<<<<<<<<<<<<-----------------------...------------------------------------->>>>..>>>>>>>>>>>>..<<<<.<<<...--<<<<<<..<<<...<<<<<<--------....--------->>>>>>..>>>..>>>>>><<<<.<<<<<<<<.<<<<<<<...>>>>>>>.>>>>>>>>>>>>...[.[[[[[...>>>>>>><<<<.<<.<<<<..---------..>>>>.>>.>>>>.......]]]]]]<<--..<<<<<---....-->>>>><<<<<<<<<..-.<<<<-.....->>>>...>>>>>>>>><<<<<<<<<<<<<<<------....-->>>>>.>>>>>.>>>>>..------------------------------------------------------------...-.....>>.--].]]]]]....
Sdi.S516-1          caagucuggu--GGACCAU(08)CAA--UGCUGACGCCAGA-GAUAGCAGGGCCCCCUC---------------CGGGGGGUUACGCCUGCUAGUCGAGCACUCGCGAU----------------------CGCGA----------------------------------------UGGGUGAGUGCCGGCGAGGUGACCUGGU--ACGGGGAAGCCUAAGGAUCUCGGCCGC-GAGG---GCGGUCGGGUCUAUGGUGAUCCCGUGGCGAGCUGU---------GGGAGGGG--------ACAGCCGUCGUAACGCGCGGAAAGGCACCGGUCGCUU---------------------UAGCGGCUCGAGGGACGUGCUGU--CCCAUCC---GAAA--GGAUGCCUUCAACUGG-AGCAC-CCAUC-GUGUAAAGGUUGGAGGGGGUUUACGGCC--------UACGU-------GGUCAUGAACCUGG------------------------------------------------------------GUACUAUAAACG--gccagcagccg
                    ....<<<<<<--<......~~~~...--[[[[[.^>>>>>>-...<<<<<<<<<<<<..---------------..>>>>>>....>>>>>>.<<<<.<<<<<<<<...----------------------.....----------------------------------------...>>>>>>>>>>>>..<<<<.<<<...--<<<<<<..<<<...<<<<<.<<<<<<<-....--->>>>>>>>>>>>..>>>..>>>>>><<<<.<<<<<---------........-------->>>>>>>>>...[.[[[[[...>>>>>>><<<<<<..---------------------..>>>>>>.......]]]]]]<<--..<<<<<---....-->>>>><<<<<<<<<..-.<<<<-.....->>>>...>>>>>>>>>.<<<<<<.<<<<--------.....------->>>>.>>>>>>...------------------------------------------------------------.........>>.--].]]]]]....
Sdi.S516-2          caagucuggu--GGACCAU(08)CAA--UGCUGACGCCAGA-GAUAGCAGGGCCCCCUC---------------CGGGGGGUUACGCCUGCUAGUCGAGCACUCGCGAU----------------------CGCGA----------------------------------------UGGGUGAGUGCCGGCGAGGUGACCUGGU--ACGGGGAAGCCUAAGGAUCUCGGCCGC-GAGG---GCGGUCGGGUCUAUGGUGAUCCCGUGGCGAGCUGU---------GGGAGGGG--------ACAGCCGUCGUAACGCGCGGAAAGGCACCGGUCGCUU---------------------UAGCGGCUCGAGGGACGUGCUGU--CCCAUCC---GAAA--GGAUGCCUUCAACUGG-AGCAC-CCAUC-GUGUAAAGGUUGGAGGGGGUUUACGGCC--------UACGU-------GGUCAUGAACCUGG------------------------------------------------------------GUACUAUAAACG--gccagcagccg
                    ....<<<<<<--<......~~~~...--[[[[[.^>>>>>>-...<<<<<<<<<<<<..---------------..>>>>>>....>>>>>>.<<<<.<<<<<<<<...----------------------.....----------------------------------------...>>>>>>>>>>>>..<<<<.<<<...--<<<<<<..<<<...<<<<<.<<<<<<<-....--->>>>>>>>>>>>..>>>..>>>>>><<<<.<<<<<---------........-------->>>>>>>>>...[.[[[[[...>>>>>>><<<<<<..---------------------..>>>>>>.......]]]]]]<<--..<<<<<---....-->>>>><<<<<<<<<..-.<<<<-.....->>>>...>>>>>>>>>.<<<<<<.<<<<--------.....------->>>>.>>>>>>...------------------------------------------------------------.........>>.--].]]]]]....
Nar.S516            caagucuggu--GGACUUG(10)UUAC--UUCGGCACCAGA-AAAUACAGAUG-------------------------------AUUCUGUCAGUCUGUCG----------------------------------------------------------------------------GGUCAACGACGGGCGAGGCU-CCUGGC--UCGGGGAACAUUGAGGAUGUU-------CAUG--------AACAUGCUUGACCAUCCCGCAGUGAACCAAA--------UUUUUUU--------UUUGGUCAUUGUAAAGCGCGAAAAGGUGCCGGCCGACCGAUUUCCCCCCCUUUAAAUCCGGUCGGCUCGAGGGACGUGCUAU-UUUCACCU---GUAA--GGGUGGCUCCUUGA---CGUGA-UUAAUUUUGC-UGCCAAGGGGACGAGGCUUUCGCAAA------CUCU-----UUUGCAGGUAUCG-AA-----------------------------------------------------------UAUGCGAAUCCAG--gccagcagccg
                    ....<<<<<<--<......~~~~....--[[[[[^>>>>>>-....<<<<<..-------------------------------..>>>>>..<<<<<<<<----------------------------------------------------------------------------......>>>>>>>>..<<<.-<<<...--.<<<<<....<<<<<.<<<<<-------....-------->>>>>.>>>>>...>>>>>.<<<<.<<<<<<--------.......-------->>>>>>>>>>...[.[[[[[...>>>.>>><<<<<<<<<<<<<..........>>>>.>>>>>>>>>.......]]]]]]<<-..<<<<<<---....-->>>>>><<<<<<<.---<<<<<-......>>>>-.>.>>>>>>>.<<<.<<<<..<<<<<------....----->>>>>>>>>.>>>-..-----------------------------------------------------------..........>>.--]]]]]].....
Pcon.S516           caagucuggu--GGACUCG(05)CGAC--GCUGGCACCAGAC-AUCGGGGACGGAGCCGUA-----------------AUCGGUUCCCCCCGAGUCGCU------------------------------------------------------------------------------------UCGGCGGCGAGGCA-CUUGGU--UCGGGGAACGCUGUGCGGAGAGGUG---UAAAC----CACGUCCCGUCUAGCAAUCCCGUGACGAGGAAAGU---------UUUG--------GCUUGCCCGUCAUAACGCGCGCAAAAGUGCCGGUCACUU---------------------GGGUGACUCGAGGGACGUGCUGUUUCCUAUUC---GUAA--GAAUACCUAUGUCCGAGCCUUGG-UAUCCAACGCGAAGAUAUCGGCAGGUUGGUU-----------GGUA---------AACCGCCUGGAAACUCAAAAU---------------------(126)-----------------AUUUUG-----CCCUAAGAG--ccagcagccg-
                    ...<<<<<<<--<......~~~~....--[[[[[>>>>>>>>-..<<<<<..<<<<<<<..-----------------..>>>>>>>>>>>>.<<<<<.------------------------------------------------------------------------------------...>>>>>..<<<<-<<<...--.<<<<<...<<<<.<<<<.<<.<<<---.....---->>>.>>>>>>.>>>>..>>>>>.<<<<.<<.<<<<---------....-------->>>>.>>>>>>...[.[[[[[...>>>>>>><<<<<<..---------------------..>>>>>>.......]]]]]].<<...<<<<<---....-->>>>><<.<<<<<...<<.<<<<-...>>>>.>>...>>>>>.>><<<<<.<<<<-----------....--------->>>>>>>>>......<<<<<<---------------------~~~~~----------------->>>>>>-----......>>.--]]]]].....-
Phy.S516            caagucuggu--GGACUAG(04)CAA--UGCUGGCACCAGA-AAGAGCGGGGCCGC-------------------------AGCGCCCCGCCAGUCCGCGCC------------------------------GCAA----------------------------------------------GGCCCGGGCGAGGCAACCUGGC--UCGGGGAAACCCAUUAACUGCG------GCAA--------CGCAGCUGUGGCGAUCCCGGGGUGAACAGCU----------CUUG---------GGCUGUCAUCUUAACGUGCGGAAAGGAGCCGGUCAUUUC-------------------AUCAUGGCUNGAGGGACGCGCUGU-UUUCAUCU---UCGC--GGAUGUUUACCUAUCGAUCCCCUUACACGUCCUUUUUCGCGGGAUGUGUCGGGGGGUU------------------------------------------------------------------------------------------ACUUAAACCUAAUCG--gccagcagccg
                    ....<<<<<<--<......~~~~...--[[[[[[^>>>>>>-....<<<<<<<...-------------------------...>>>>>>>..<<<<<.<<<------------------------------....---------------------------------------------->>>.>>>>>..<<<<.<<<...--<<<<<<....<<<<...<<<<<------....-------->>>>>..>>>>...>>>>>><<<<.<<<<<<----------....--------->>>>>>>>>>...[.[[[[[...>>>>>>><<<<<<...-------------------...>>>>>>.......]]]]]]<.-...<<<<<---....-->>>>>..........<<<<<<<<.<<<<<<<<<.......>>>>>>>>>.>>>>>>>>------------------------------------------------------------------------------------------.............>.--]]]]]]]....
Mca.S516            caagucuggu--GAACGUU(07)AAUGC--UUGGCACCAGA-AAAUACAGGCUUCAUCCCCCCCCAGGGUCCGGGGGGCGAUUGCGCCUGUCAGUCCGACGUUUUG--------------------------GCUU------------------------------------------CAACACGUAGGGCGAGGCUACCUGGC--UCGGGGAACAUCGGAAGACGCC------GAAA--------GGCUCUUCGGACGAUCUCGCAGUGAACAUG-----------CUUU----------CAUGUCAUUGUAAAGCGCGAAAAGGUGCCGGCCGACCCAUA---------------ACGGGCGGCUCGAGGGACGUGCUAUU-CCCAUCC---UUGC--GGGUGUCCUUGGGCGC-AUGCG-GAGA---CGUCGGCGCCCCGGG----------------------------------------UUCGGG--------------------------------------------------------------ACGAUGAACG--gccagcagccg
                    ....<<<<<<--<......~~~~.....--[[[[^>>>>>>-....<<<<<<...<<<<<<<<<........>>>>>>.>>>...>>>>>>..<<<<.<<<<.<<<--------------------------....------------------------------------------>>>.>>>>.>>>>..<<<..<<<...--.<<<<<....<<.<<<<<.<<<------....-------->>>>>>>>.>>...>>>>>.<<<<.<<<<<-----------....---------->>>>>>>>>...[.[[[[[...>>>.>>><<<<<.<<<...---------------..>>>>>>>>.......]]]]]].<<-..<<<<<---....-->>>>><<<..<<<<<<-..<<<-....--->>>..>>>>>>.>>>----------------------------------------......--------------------------------------------------------------......>>..--]]]]]......
Gni.S516            caagucuggu--GGACAUU(09)AAA--UGCUGACGCCAGA-GAUAGUAGGGCGCCUCCCUCA--------CGGGGGGGUGUUAUGCCUGCUAGUCCAGCAUCCCAUUUCA---------------------GCGA----------------------------------------UGGGUGGAUGCCGGCAAGGUGACCUGGU--ACGGGGAAGCCUAAGGGCCC--------GAGA---------GGGCCUAUGGUAAUCCCGUGGCGAGCCU-----------CGCAAA----------AGGCCGUCGUAACGCGCGGAAAGGCACCGGCCGCCACUGA--------------GAGUGGCGGCUCAUGGGACGUGCUGU--CCCAUCC---GAAA--GGAUGCCCUCAACUAG-AGCAC-CCAUC-GUGUAAAGGUUGAGGGAGGGUUUGCUGC--------CAUAU----------GCAGCUCCUGGGUACCUAUUUCUAGCUUUGUGUGCGCU---CAUUA--GGUGCACAGCUUGAGAAUGGG----CAAAUAAACG--gccagcagccg
                    ....<<<<<<--<......~~~~...--[[[[[.^>>>>>>-...<<<<<<<<<<<<<<<<..--------.>>>>>>>>>>....>>>>>>.<.<<.<<<<<<.<<<.<<---------------------....---------------------------------------->>>>>>>>>>>.>>>..<<<<.<<<...--<<<<<<..<<<...<<<<<<--------....--------->>>>>>..>>>..>>>>>><<<<.<<<<-----------......---------->>>>>>>>...[.[[[[[...>>>>>>><<<<<<<<<<..--------------.>>>>>>>>>>.......]]]]]]<<--..<<<<<---....-->>>>><<<<<<<<<..-.<<<<-.....->>>>...>>>>>>>>>.<<<...<<<<<--------.....---------->>>>>>>>......<<<<<<<<.<<<<....<<<<<<<---.....-->>>>>>>>>>>.>>>.>>>>>----.......>>.--].]]]]]....
Pe_um.nS516         caagucuggu--GGACCCU(11)GGC--UGCUGACGCCAGC-GAUAGUGGGGGUCGCCGUC------------CACGGCGAUCGGGCCCGCUAGUCGAGCACCCCGAGCU---------------------GGUGA----------------------------------------UGGGCGGGUGCCGGCAAGACAACCUGGA--UCGGGGGAGGCUGCGGC----------UGCGUU---------GUGGCAUGCCAACCCCGAGCGGAGCCCUUGCC------AUUGC-----GGUCAGGGACCCGUGUAGAGCGCGCAAAGGUGUCGGUCGACCCAU---------------GAGGGUCGGCUUGAGGGACGUGCCAUU-CCCGCCC---GAAA--GGGCGACCUCCACCCG-AGCCC-CCAUC-AGG-ACAGGGUGGAG-CGGGGCCUC--------AGCUUGGGGAUC------GAGGCCCG------------------------------------------------------------------GAGUACAAG--gccagcagccg
                    .....<<<<<--<......~~~~...--[[[[[.^>>>>>.-...<<<<<<<<<<<<<<..------------..>>>>>>>>...>>>>>>.<<<<.<<<<<<...<<<---------------------.....----------------------------------------..>>>>>>>>>>>>>..<<<<.<<<...--<<<<<<..<<<<<<.<<----------......--------->>.>>>.>>>..>>>>>><<<<..<<<<.<<<------.....----->>>.>>>>..>>>>...[.[[[[[...>>>>>>><<<<<<<<<..---------------..>>>>>>>>>.......]]]]]].<<-..<<<<<---....-->>>>>..<<<<<<<<.-..<<.-.....-.>>-...>>>>>>>>-<<<<.<<<<--------............------>>>>>>>>------------------------------------------------------------------......>>.--].]]]]]....
Che-2.nS516         caagucuggu--GAGC-------GUUC--GCUGGCGCCGGAU-AGAGCUGCCCCUCCAGCGCUGGAG--------AGCCGGCCGAAGCAGCUAGUCGAGCGCCCGUUG-----------------------CGUGA----------------------------------------CGGGUGGGCGCCGGCGAGACAACCUGGG--UCGGGGGAGGCUAAGGGCCC--------UGGG---------GGGCCUACGCUGAUCCCGAGCAGAGCCGC----------CGCGU----------GCGGCCUGUGUAGAGCGCGCCAAGGUGUCGGUCUUGGGGGUCCCUCG--GGAGGGGCCCCGGGGCUUAAGGUACGCGCCAAU-CCCCCGU---GAAA--ACGGGGCCCAGCGGAGUAGCAC-CCGUC-GUGCGAAGCCGCUGGGGGGCCUUCGGGUCGUGGGCAAUAGGGGGCCUUCGGGUCGUGGGC--------------------------------------------------------------------AUGAUG--gccagcagccg
                    ...<<<<<<<--<...-------....--[[[[[^>>>>>>>-..<<<<<<...<<....<<<<<..--------..>>>>>.>>.>>>>>>.<<<<.<<<<<<<<<.-----------------------.....----------------------------------------..>>>>>>>>>>>>>..<<<<.<<<...--<<<<<<..<<<...<<<<<<--------....--------->>>>>>..>>>..>>>>>><<<<.<<<<<----------.....---------->>>>>>>>>...[.[[[[[...>>>>>>><<<<<<<<<<.<<<<<..--..>>>>>>>>>>>>>>>.......]]]]]].<<-.<<<<<<---....-->>>>>><<<<<<<<....<<<<-.....->>>>....>>>>>>>>..<<<<.<<<.<<<.<<<<........>>>>.>>>.>>>.>>>>--------------------------------------------------------------------...>>.--]]]]]].....
Che-1.nS516         caagucuggu--GAGC-------GUUC--GCUGGCGCCGGAU-AGAGCUGCCCCUCCAGCGCUGGAG--------AGCCGGCCGAAGCAGCUAGUCGAGCGCCCGUUG-----------------------CGUGA----------------------------------------CGGGUGGGCGCCGGCGAGACAACCUGGG--UCGGGGGAGGCUAAGGGCCC--------UGGG---------GGGCCUACGCUGAUCCCGAGCAGAGCCGC----------CCCGU----------GCGGCCUGUGUAGAGCGCGCCAAGGUGUCGGUCUUGGGGGUCCCUCG--GGAGGGGCCCCGGGGCUUAAGGUACGCGCCAAU-CCCCCGU---GAAA--ACGGGGCCCAGCGGAGUAGCAC-CCGUC-GUGCGAAGCCGCUGGGGGGCCUUCGGGUCGUGGGCAAU-GGGGGCCUUCGGGUCGUGGGC--------------------------------------------------------------------AUGAUG--gccagcagccg
                    ...<<<<<<<--<...-------....--[[[[[^>>>>>>>-..<<<<<<...<<....<<<<<..--------..>>>>>.>>.>>>>>>.<<<<.<<<<<<<<<.-----------------------.....----------------------------------------..>>>>>>>>>>>>>..<<<<.<<<...--<<<<<<..<<<...<<<<<<--------....--------->>>>>>..>>>..>>>>>><<<<.<<<<<----------.....---------->>>>>>>>>...[.[[[[[...>>>>>>><<<<<<<<<<.<<<<<..--..>>>>>>>>>>>>>>>.......]]]]]].<<-.<<<<<<---....-->>>>>><<<<<<<<....<<<<-.....->>>>....>>>>>>>>..<<<<.<<<.<<<.<<<<...-....>>>>.>>>.>>>.>>>>--------------------------------------------------------------------...>>.--]]]]]].....
Hrh.S516            caagucuggu--G----------CACC--GCUGGUGCCAGAU-AGAGCCGACCCU--------------------CCGGUAAACAAACGGCUAGUCGAGCGCCCGACG-----------------------AGUGA----------------------------------------CGGGUGGGCGCCGGCGAGACAACCUGGA--UCGGGGAAGGCUAAGGGCCC--------UGCG---------GGGCCUACGCUGAUCCCGAGCAGAGCCGC-----------GCGG----------GCGGCCUGUGUAGAGCGCGCCAAGGUGUCGGUCCCGGGGAGACUU-------CGUCCCCCGGGGCUUAAGGUACGUGCCAAU-CCCCCGC---GAAA--GUGGGGCCCUGCGGACGAGCAC-CCGUC-GUGCAAAGUCGCAGGGAGGCGUGGCGGCCC-------GCGG-------GGGCCCAGCGUC-----------------------------------------------------------------GGUUCAGUG--gccagcagccg
                    ...<<<<<<<--<----------....--[[[[[^>>>>>>>-..<<<<<<<<..--------------------..>>>.......>>>>>.<<<<.<<<<<<<.<<-----------------------.....---------------------------------------->>..>>>>>>>>>>>..<<<<.<<<...--<<<<<<..<<<...<<<<<<--------....--------->>>>>>..>>>..>>>>>><<<<.<<<<<-----------....---------->>>>>>>>>...[.[[[[[...>>>>>>><<<<<<<<<<.<<<..-------.>>>>>>>>>>>>>.......]]]]]].<<-.<<<<<<---....-->>>>>><<<<<<<.<<..<<<<-.....->>>>...>>>>>>>>>.<<<<<...<<<<<-------....------->>>>>..>>>>>-----------------------------------------------------------------......>>.--]]]]]].....
Xsp-2.S516          caagucuggu--GAGC-------AU--CUGCUGGUGCCAGA-GAUAGUGAAGCCC-UA---------------------UAAA--UUUCACUAGUCGAAUGCGUCCAUU----------------------GGUGG----------------------------------------CGGGUGGACGCCGGCGAGACAACCUGGA--UCGGGGAAGGCUAAGGGC---------UUCUAC----------GCCUAUGCUAAUCCCGAGCGGAGCUACCCUA-------(96)------UAGAGUGGCCCGUGUAGAGCGCGGAAAGGUGUCGGUCCUAUAUAA-------------ACUUAUAGGGCUUAAGGGACGUGCCAGA-CCCUGCA---GAAA--UGUAGGCCAGAUAUUCGAGCGC-CCGCC-GCGCAAAGGUAUCUGGGUACUGC---------------CAU------------GCAGCUA--UUGUACUUCAGUAGGCUUCUUA---------GAA-------UAAGAAGUAGCUACU-----AAUAUUAAACG--gccagcagccg
                    ....<<<<<<--<...-------..--[[[[[[[^>>>>>>-...<<<<<<<...-..---------------------....-->>>>>>>.<<<<...<<<<<<<<<----------------------.....----------------------------------------..>>>>>>>>>>>>>..<<<<.<<<...--<<<<<<..<<<...<<<<---------......---------->>>>..>>>..>>>>>><<<<.<<<<<.<<<-------~~~~------>>>.>>>>>>>>>...[.[[[[[...>>>>>>><<<<<<<<<...-------------...>>>>>>>>>.......]]]]]].<.-.<<<<<<---....-->>>>>><<<<<<<<<...<<<<-.....->>>>...>>>>>>>>>.<<<<<<---------------...------------>>>>.>>--.........<<<<<<<<<<<<<---------...------->>>>>>>>..>>>>>-----.........>.--]]]]]]]]...
Xsp-3.S516          caagucuggu--AAGC-------AU--CUGCUGGUGCCAGA-GAUAGUGAAGCCC-UA---------------------UAAA--UUUCACUAGUCGAAUGCGUCCAUU----------------------GGUGG----------------------------------------CGGGUGGACGCCGGCGAGACAACCUGGA--UCGGGGAAGGCUAAGGGC---------UUCUAC----------GCCUAUGCUAAUCCCGAGCGGAGCUACCCUA------(107)------UAGAGUGGCCCGUGUAGAGCGCGGAAAGGUGUCGGUCCUAUAUAA-------------ACUUAUAGGGCUUAAGGGACGUGCCAGA-CCCUGCA---GAAA--UGUAGGCCAGAUAUUCGAGCGC-CCGCC-GCGCAAAGGUAUCUGGGUACUGC---------------CAU------------GCAG-UA--UUGUACUCCAGUAGGCUUCUUA---------GAA-------UAAGAAGUAGCUACU-----AAUAUUAAACG--gccagcagccg
                    ....<<<<<<--<...-------..--[[[[[[[^>>>>>>-...<<<<<<<...-..---------------------....-->>>>>>>.<<<<...<<<<<<<<<----------------------.....----------------------------------------..>>>>>>>>>>>>>..<<<<.<<<...--<<<<<<..<<<...<<<<---------......---------->>>>..>>>..>>>>>><<<<.<<<<<.<<<------~~~~~------>>>.>>>>>>>>>...[.[[[[[...>>>>>>><<<<<<<<<...-------------...>>>>>>>>>.......]]]]]].<.-.<<<<<<---....-->>>>>><<<<<<<<<...<<<<-.....->>>>...>>>>>>>>>.<<<<<<---------------...------------>>>>->>--.........<<<<<<<<<<<<<---------...------->>>>>>>>..>>>>>-----.........>.--]]]]]]]]...
Dsp.S516            caagucuggu--GAGC-------AU--CUGCUGGUGCCAGA-AAUAGUGAAGCCC-UA---------------------UAAA---UUCACUAGUCGAAUGCAUCUAUC----------------------AGUGG----------------------------------------CGGGUGGAUGCCGGCGAGACAACCUGGA--UCGGGGAAGGCUAAGGGC---------UUUGGU----------GCCUAUGCUAAUCUCGAGCGGAGCUGU-------------------------ACAGCCCGUGUAGAGCGCGGAAAGGUGUCGGUCCUAUAAU---------------UUUAUAGGGCUUAAGGGACGUGCCAKA-CCCUACA---GAAA--UGUAGGCCAGAUACUCGAGCGC-CCGCC-GCGCGAAGGUAUYUGGGGUACUGC-------------UACA-----------GCGGUAUC--------------------------------------------------------GUAUUCGAAUAAUAAACG--gccagcagccg
                    ....<<<<<<--<...-------..--[[[[[[[^>>>>>>-...<<<<<<....-..---------------------....--->>>>>>.<<<<...<<<<<<<<<----------------------.....----------------------------------------..>>>>>>>>>>>>>..<<<<.<<<...--<<<<<<..<<<...<<<<---------......---------->>>>..>>>..>>>>>><<<<.<<<..-------------------------..>>>>>>>...[.[[[[[...>>>>>>><<<<<<<<<..---------------..>>>>>>>>>.......]]]]]].<.-.<<<<<<---....-->>>>>><<<<<<<<<...<<<<-.....->>>>...>>>>>>>>><<<<<<<<-------------....----------->>>>>>>>--------------------------------------------------------................>.--]]]]]]]]...
Xsp-1.S516          caagucuggu--GAACCUU--UUUU--UUGCUGGCGCCAGA-AAUAGUAGUGCCCGUA---------------------CAA-CAAACUACUAGUCGAGCACGUCGCUUCUG---------------------UAA----------------------------------------CGGAGGCGUGCCGGCGAGACAACCUGGAUAUCGGGGAAGGCUAAGACGA---------UCCUC---------UCGUUAUGCUGAUCCCGGGCAGACCCGU-----------CGAU----------CGGGACUGUAUAGAGCGUGGAAAGGUGUCGGCCGUCCUA-----------------AGGGAUGGCUUAAGGUACAUGCCAAC-CCUUCUU---GAAA--AAGAAGUAUAGUGUUUAAGCAG-CCGUU-AUGUGACAACACUAUGAGACUA---------------CUCG--------------UAGUC---UGUAGCCUAGAGGC---------------GCCAGA--------------GCCUCUGG--------AGAGUG--gccagcagccg
                    ....<<<<<<--<......--....--[[[[[[[^>>>>>>-...<<<<<<.......---------------------...-...>>>>>>.<<<<.<<<<...<<<<<<<---------------------...---------------------------------------->>>>>>>>>>>>>>>..<<<<.<<<.....<<<<<<..<<<...<<<<<---------.....--------->>>>>..>>>..>>>>>><<<<.<<<<.-----------....---------->>>>.>>>>...[.[[[[[...>>>>>>><<<<<<<<..-----------------..>>>>>>>>.......]]]]]].<<-.<<<<<<---....-->>>>>><<<<<<<<<...<<<.-.....-.>>>...>>>>>>>>>.<<<<<---------------....-------------->>>>>---......<<<<<<<<---------------......-------------->>>>>>>>--------...>>.--]]]]]]]]...
Lqu.S516            caaguuuggu--GAGAAUUAGUAUCGC----GGACGCNAGA-AAUAAUU----------------UGA--------------------AAUUNGUCGAUCUGCAC---------------------ACGUAANUUGGGC------------------------------------------GUGNAGCGNCAAGACAACCUGGA--UNGGGGAAGGCUAAGGGCU----------UCA----------AGCCUAUGCUAAUCCCGAGCCGAGCUGCCACGGG-----GUGA---CCCGUGGCCAGCCGGUGUAGAGCGCGGAAAGGUGUCGGUCACUCUAAGGAA----------NNNCAGGUGGNNNAAGGGACGUGCCAGU-CUCACGC---GAAA--GCGUGCUUUGUAGCGUGAGCCC-CCAAG--GGUGAGCGUUANGAGGGUGUANUCCUGAUUGCAGAGGUNANNGUAGCA----------------------------------------------------------------------------UCAUAUUCG--gccagcagcc-
                    ....<<<<<<--<..............----[[.^>>>>>>-...<<<<----------------...-------------------->>>>.<<<<..<<<<<<---------------------.............------------------------------------------>>>>>>>>>>..<<<<.<<<...--<<<<<<..<<<...<<<<<----------...---------->>>>>..>>>..>>>>>><<<<.<<<<<<<<<<<-----....--->>>>>>>.>>>>>>>>...[.[[[[[...>>>>>>>..<<<<<.<......----------....>>>>>>.........]]]]]].<.-..<<<<<---....-->>>>><<<<<<<<<<...<<<.-.....-->>>...>>>>>>>>>>................................----------------------------------------------------------------------------.......>.--]]].......-
St_sp.S516          caagucuggu--AAUUGG-(78)---GCUGUUGACGCCAGA-GAUAGUGGGGCGGCC-------GUGUU-------GGCCGUUACGCCUGCUAGUCGAGCAGCCGAUG------------------------CAAUG-------------------------------------AUCGGGUGGCUGCCGGCAAGACGACCUGGA--ACGGGGGAGGCCUU----------CACAAAAUUCAAA---------AGGGCUAAUCCCGUGGCGAGCUUGCACAGG-----GCGA---CCUGUGCGAAGCCGUCGUAACGCACGGAAAGGCGUCGGUCGACUGCAUGUUUU----AAACAUGCAGCCGGCUUAAGGGACGUGCUAAA-CCCAUCCGAUGAUAAAGGAUGCCCCGGACACU-AGGU-CCCGAUC-ACCGAAGGUCCGUGGGAGGCAAGAGUGUUGGA--AGGAAAUG---UCCAGACACUGCCCGG---------------------------------------------------------------UAUCAAUUG--gccagcagccg
                    ....<<<<<<--......-~~~~---[[[[[[[.[>>>>>>-...<<<<<<<<<<<<-------.....------->>>>>>....>>>>>>.<<<<.<<<<<<<<<.------------------------.....------------------------------------->>>....>>>>>>>>>>..<<<<.<<<...--<<<<<<..<<<<<<----------.............--------->>>>>>..>>>>>><<<<.<<<<<<<<<<<-----....--->>>>>>>.>>>>>>>>...[.[[[[[...>>>>>>><<<<<.<<<<<<<<<..----.>>>>>>>>>.>>>>>.......]]]]]]<<.-..<<<<<.........>>>>><<<<<<<<.<<-.<<<-.......->>>..>>>>>>>.>>>.<<<<...<<<<<<<<--........--->>>>.>>>>>>>>...---------------------------------------------------------------......>>.--].]]]]]]]..
Csa.S516-2          caagucuggu--AAUUGG-(75)---GCUGUUGACGCCAGA-GAUAGCGGGGCGGACCGAG---GAGA----CUCGGGCCGUUAAGCCUGCUAGUCGAUGCAGCCACA-------------------CACUCGGAUCGG----------------------------------------GUGGCUGCCGGCAAGACGACCUGGA--ACGGGGAAGGCCUUCACUGAGAC-----GCAA--------GUCUCAGCGGUUGAUCCCGUGGCGAGCUCUCGAGGG-----GUGA-CCUUCGUCAGGAGCCGUCGUAACGCACGGUAAGGCGUCGGUCGGCUGGCUC-----------AGGCCAGUCGGCUUAAGGGACGUGCUAAU-CCCACGCGAUGAUAAAGCGUGCCUUGGGCUGG-AGAC-CCCGAUC-GUCGAUCGUCCAAGG-GAGCGGCCGCUU--------GCAA-----AGGCGAGCCGCUC-GG----------------------------------------------------------------UAGUAAUG--gccagcagccg
                    ....<<<<<<--......-~~~~---[[[[[[[.[>>>>>>-...<<<<<<<<<<.<<<<<---....---->>>>>.>>>>....>>>>>>.<<<<..<<<<<<<<.-------------------............---------------------------------------->>>>>>>>>>>>..<<<<.<<<...--<<<<<<..<<<<....<<<<<<<-----....-------->>>>>>>.>>>>..>>>>>><<<<.<<<<<<<<<<<-----....->>>>>>...>>>>>>>>>...[.[[[[[...>>>>>>><<<<<<<<<<<..-----------..>>>>>>>>>>>.......]]]]]].<<-..<<<<<.........>>>>><<<<<<<<...-.<<<-.......->>>....>>>>>>>>-<<<<<<<<<<<<--------....----->>>>>.>>>>>>>-..----------------------------------------------------------------.....>>.--].]]]]]]]..
Chlo_sp-6.S516      caagucuggu--AAUUGG-(75)---GCUGUUGACGCCAGA-GAUAGCGGGGCGGACCGAG---GAGA----CUCGGGCCGUUAAGCCUGCUAGUCGAUGCAGCCACA-------------------CACUCGGAUCGG----------------------------------------GUGGCUGCCGGCAAGACGACCUGGA--ACGGGGAAGGCCUUCACUGAGAC-----GCAA--------GUCUCAGCGGUUGAUCCCGUGGCGAGCUCUCGAGGG-----GUGA-CCUUCGUCAGGAGCCGUCGUAACGCACGGUAAGGCGUCGGUCGGCUGGCUC-----------AGGCCAGUCGGCUUAAGGGACGUGCUAAU-CCCACGCGAUGAUAAAGCGUGCCUUGGGCUGG-AGAC-CCCGAUC-GUCGAUCGUCCAAGG-GAGCGGCCGCUU--------GCAA-----AGGCGAGCCGCUC-GG----------------------------------------------------------------UAGUAAUG--gccagcagccg
                    ....<<<<<<--......-~~~~---[[[[[[[.[>>>>>>-...<<<<<<<<<<.<<<<<---....---->>>>>.>>>>....>>>>>>.<<<<..<<<<<<<<.-------------------............---------------------------------------->>>>>>>>>>>>..<<<<.<<<...--<<<<<<..<<<<....<<<<<<<-----....-------->>>>>>>.>>>>..>>>>>><<<<.<<<<<<<<<<<-----....->>>>>>...>>>>>>>>>...[.[[[[[...>>>>>>><<<<<<<<<<<..-----------..>>>>>>>>>>>.......]]]]]].<<-..<<<<<.........>>>>><<<<<<<<...-.<<<-.......->>>....>>>>>>>>-<<<<<<<<<<<<--------....----->>>>>.>>>>>>>-..----------------------------------------------------------------.....>>.--].]]]]]]]..
Chlo_sp-12.S516     caagucuggu--GGACAUC----A--GCUGUUGACGCCAGA-GAUAGUGGGGCAUCUC------GAAA-------GAGGUGUUAGGCCCGUUAGUCGAGCAGCCAAUC---------------------AAAUAGAUCG-------------------------------------GGUUUGGCUGCCGGCAAGGUGACCUGGA--ACGGGGAAGGCCCUCAAGCC--------ACCA----------GGCAUGGGCUGAUCCCGUGGCGAGUCGGUGGGGA-----GCGAUCUYCRCCAAAUGACCGUCGUAACGCACGGAAAGGCACCGGGGGACUCCAA-------------CCGGAGUCUCCUCGAGGGACGUGCUAAA-CCCACGCGAUGACAAAGCGUGUCUCGUGCAUU-AGCC-CCCGAUC-GGCGAAGGCAGGAGA-GGGUGACAGCCUUUUGAGAGGAAAUG--CUCAAAGGCUACCC-GG----------------------------------------------------------------UAUCAUUG--ccagcagccg-
                    ....<<<<<<--.......----.--[[[[[[[..>>>>>>-.....<<<<<<<<<<<------....------->>>>>>>....>>>>...<<<<.<<<<<<<<<<---------------------..........------------------------------------->>.>>>>>>>>>>>>..<<<<.<<<...--<<<<<<..<<<<<....<<<--------....---------->>>..>>>>>..>>>>>><<<<.<<<<<<<<<<<-----....>>>>>>>>....>>>>>>>...[.[[[[[...>>>>>>><<<<<<<<<<..-------------..>>>>>>>>>>.......]]]]]].<<-..<<<<<.........>>>>>.<<<.<<<...-.<<<-.......->>>....>>>.>>>.-<<<<...<<<<<<<.<<<........-->>>>>>>>>>>>>>-..----------------------------------------------------------------.....>>.--.]]]]]]]..-
Br_sp.S516          caagucuggu--GAACGAU(07)A--GCUGUUGACGCCAGA-GAUAGUAGGGCGGCCUCA----CUAGU----UGGGGCUGUUAUGCCUGCUAGUCGAGCAAUCACAC---------------------AAUGGAACGG---------------------------------------GUUGAUUGCCGGCAAGACGACCUGGU--ACGGGGAAGGCCUUCACA----------CAUUC-----------UGUGGGCUAAUCCCGUGGCGAGCUUGUGGAGG-----GCGA---CCUCCAUGAAGCCGUCGUAACGCACGCUAAGGCGUCGGCUGACUCUA----------------GUAGUUGGCUUAAGGGACGUGCUAAU-CCCAUCCGAUGACAAAGGAUGCUCAGAGCAAU-AGCA-CCCGUUC-UGCGAAGGCUCUGGG-GGGCGAGAGUGCGGGG--AGGAAAUG---CCUUGCACUGUCC-GG----------------------------------------------------------------UACUGAUG--gccagcagccg
                    ....<<<<<<--<......~~~~.--[[[[[[[.^>>>>>>-...<<<<<<<<<<<<<<<----.....---->>>>>>>>>....>>>>>>.<<<<.<<<<<<<.<<---------------------..........--------------------------------------->>>>>>>>>>>>>..<<<<.<<<...--<<<<<<..<<<<..<<<<----------.....----------->>>>>>>>..>>>>>><<<<.<<<<<<<<<<<-----....--->>>>>>>.>>>>>>>>...[.[[[[[...>>>>>>><<<<<<<<...----------------..>>>>>>>>.......]]]]]].<<-..<<<<<.........>>>>><<<<<<<<...-.<<<-.......->>>....>>>>>>>>-<<<<...<<<<<<<<<--........--->>>>>>>>>>>>>-..----------------------------------------------------------------.....>>.--].]]]]]]]..
Bo_sp.S516          caagucuggu--GAACAUU(10)U--GCUGUUGACGCCAGA-GAUAGUGGGGCAGC--------GUAC---------GCUGUUAUGCCUGCUAGUCGAGCAACCACAA-----------------UGCACAAGGAAUGG---------------------------------------GUGGGUUGCCGGCAAGACGACCUGGU--ACGGGGAAGGCUAAGUUGCAG--------ACU--------CUGCAAUAUGCUAAUCCCGUGGUGAGCUUGUGAAGG-----GUGA---CUUUCACACAGCCAUCGUAACGCACGGUAAGGCGUCGGCUGACUCCUG-------------UGAGAGUUGGCUUAAGGGACGUGCUAAC-CCCAUCC---GAAA--GGAUGCCUGAUGGAAU-AGUA-CCCAUUC-UACAAAGCCAUCAGG-GGGCAUGAGUGCAUUGAG--GAAAUG---CUUUGCACUGCCC-GGUAUAGAUCAAACCA-----------------AUAG---------------UGGUUUGA-------CCGAGUG--gccagcagccg
                    ....<<<<<<--<......~~~~.--[[[[[[[.^>>>>>>-...<<<<<<<<<<<--------....--------->>>>>....>>>>>>.<<<<.<<<<<<.<<.-----------------..............---------------------------------------.>>>>>>>>>>>>..<<<<.<<<...--<<<<<<..<<<...<<<<<<<--------...-------->>>>>>>..>>>..>>>>>><<<<.<<<<<<<<<<<-----....--->>>>>>>>.>>>>>>>...[.[[[[[...>>>>>>><<<<<<<<<...-------------...>>>>>>>>>.......]]]]]].<<-..<<<<<---....-->>>>><<<<<<<<...-.<<<-.......->>>....>>>>>>>>-<<<<<...<<<<<..<<<--......--->>>>>>>>>>>>>-........<<<<<<<<-----------------....--------------->>>>>>>>-------....>>.--].]]]]]]]..
sce_sp.S516         caagucuggu--GAACACU(07)U--GCUGUUGACGCCAGA-GAUAGUAGGGCAGCU-------GCAA--------AGCUGUUAUGCCUGCUAGUCGAGCAAUCAAUC---------------------AAUUGAACGG---------------------------------------GCUGGUUGCCGGCAAGACGACCUGGU--ACGGGGAAGGCCU-------------UCAAUAACU------------GGGCUAAUCCCGUGGCGAGCUUGCAAAAG-----GCGA---CUUUUGCAAAGCCGUCGUAACGCACGGAAAGGCGUCGGCCGACUCUC----------------UGAGUCGGCUUGAGGGACGUGCUAAC-CCCACCCGAUGACAAAGGGUGUCCAAUGCAAC-AGCA-CCCGUUC-UGCGAAGGCAUUGGA-GGGCAAGAGUGUGUUGAG--GAAAUG---CUUCACACUGCCC-GG----------------------------------------------------------------UACAAGUG--gccagcagccg
                    ....<<<<<<--<......~~~~.--[[[[[[[.^>>>>>>-...<<<<<<<<<<<<-------....-------->>>>>>....>>>>>>.<<<<.<<<<<<<.<<---------------------..........--------------------------------------->>>>>>>>>>>>>..<<<<.<<<...--<<<<<<..<<<<<-------------.........------------>>>>>..>>>>>><<<<.<<<<<<<<<<<-----....--->>>>>>>.>>>>>>>>...[.[[[[[...>>>>>>><<<<<<<<<..----------------.>>>>>>>>>.......]]]]]].<<-..<<<<<.........>>>>>.<<<<<<<...-.<<<-.......->>>....>>>>>>>.-<<<<<...<<<<<..<<<--......--->>>>>>>>>>>>>-..----------------------------------------------------------------.....>>.--].]]]]]]]..
Chlo_sp-8.S943      caccaggcgu--UA-------------ACUAUCUGGCGCCU-AAGAGUCGGCUAC---------------------------UGUGUCGGCUAGUCCACCCAGCAC---------------------------CAAA-----------------------------------GUGCAAGGAGUUGGGGGGCAAGACAACCUGGA--ACGAGGGAAGCCGACGGAGAU--------UCU-------GUCUCCCAGGGCCAAUCUCGUGGCGAGCUCUA----------GCGA---------UGGAGCCGUCGUAACGCGCGGCAAGGUGUCGGCUCUGUCCCUUU---------UUUGGGACCGGGCUUAAGGAACGUGCUAGU-CCCCUGG---ACCAA-CCAGGCCAGUUGCUGG-AGUG-CUUGCAC-CACUAAGGCAGCUGG-AAGCGUUUGAGAUCGUGGAGGAAAUG-CCUCGAUCGAUGCUU-GG-----------------------------------------------------------------UAUCUCG--ggagccugcg-
                    ....<<<<<<--<<-------------....[[^>>>>>>>-...<<<<<<<...---------------------------...>>>>>>>.<<<<.<<<<<<<<---------------------------....----------------------------------->>>>.......>>>>>>>>..<<<<.<<<...--<<<<<<...<<<...<<<<<<--------...------->>>>>>...>>>...>>>>>><<<<.<<<<<<----------....--------->>>>>>>>>>...[.[[[[[...>>>>>>><<<<<.<<<<<...---------...>>>>>.>>>>>.......]]]]]]<<.-..<<<<<---.....->>>>><<<<<<<<<..-<<<<-.......->>>>..>>>>>>>>>-<<<<<<<...<<<<<.<<........->>.>>>>>>>>>>>>-..-----------------------------------------------------------------...>>..--]]].......-
Chlo_sp-9.S943      caccaggcgu--UA-------------ACUAUCUGGCGCCU-AAGAGUCGGCUAC---------------------------UGUGUCGGCUAGUCCACCCAGCAC---------------------------CAAA-----------------------------------GUGCAAGGAGUUGGGGGGCAAGACAACCUGGA--ACGAGGGAAGCCGACGGAGAU--------UCU-------GUCUCCCAGGGCCAAUCUCGUGGCGAGCUCUA----------GCGA---------UGGAGCCGUCGUAACGCGCGGCAAGGUGUCGGCUCUGUCCCUUU---------UUUGGGACCGGGCUUAAGGAACGUGCUAGU-CCCCUGG---ACCAA-CCAGGCCAGUUGCUGG-AGUG-CUUGCAC-CACUAAGGCAGCUGG-AAGCGUUUGAGAUCGUGGAGGAAAUG-CCUCGAUCGAUGCUU-GG-----------------------------------------------------------------UAUCUCG--ggagccugcg-
                    ....<<<<<<--<<-------------....[[^>>>>>>>-...<<<<<<<...---------------------------...>>>>>>>.<<<<.<<<<<<<<---------------------------....----------------------------------->>>>.......>>>>>>>>..<<<<.<<<...--<<<<<<...<<<...<<<<<<--------...------->>>>>>...>>>...>>>>>><<<<.<<<<<<----------....--------->>>>>>>>>>...[.[[[[[...>>>>>>><<<<<.<<<<<...---------...>>>>>.>>>>>.......]]]]]]<<.-..<<<<<---.....->>>>><<<<<<<<<..-<<<<-.......->>>>..>>>>>>>>>-<<<<<<<...<<<<<.<<........->>.>>>>>>>>>>>>-..-----------------------------------------------------------------...>>..--]]].......-
Chlo_sp-3.S943      caccaggcgu--UA-------------ACUAUCUGGCGCCU-AAGAGUCGGCUAC---------------------------UGUGUCGGCUAGUCCACCCAGCAC---------------------------CAAA-----------------------------------GUGCAAGGAGUUGGGGGGCAAGACAACCUGGA--ACGAGGGAAGCCGACGGAGAU--------UCU-------GUCUCCCAGGGCCAAUCUCGUGGCGAGCUCUA----------GCGA---------UGGAGCCGUCGUAACGCGCGGCAAGGUGUCGGCUCUGUCCCUUU---------UUUGGGACCGGGCUUAAGGAACGUGCUAGU-CCCCUGG---ACCAA-CCAGGCCAGUUGCUGG-AGUG-CUUGCAC-CACUAAGGCAGCUGG-AAGCGUUUGAGAUCGUGGAGGAAAUG-CCUCGAUCGAUGCUU-GG-----------------------------------------------------------------UAUCUCG--ggagccugcg-
                    ....<<<<<<--<<-------------....[[^>>>>>>>-...<<<<<<<...---------------------------...>>>>>>>.<<<<.<<<<<<<<---------------------------....----------------------------------->>>>.......>>>>>>>>..<<<<.<<<...--<<<<<<...<<<...<<<<<<--------...------->>>>>>...>>>...>>>>>><<<<.<<<<<<----------....--------->>>>>>>>>>...[.[[[[[...>>>>>>><<<<<.<<<<<...---------...>>>>>.>>>>>.......]]]]]]<<.-..<<<<<---.....->>>>><<<<<<<<<..-<<<<-.......->>>>..>>>>>>>>>-<<<<<<<...<<<<<.<<........->>.>>>>>>>>>>>>-..-----------------------------------------------------------------...>>..--]]].......-
Chlo_sp-4.S943      caccaggcgu--UA-------------ACUAUCUGGCGCCU-AAGAGUCGGCUAC---------------------------UGUGUCGGCUAGUCCACCCAGCAC---------------------------CAAA-----------------------------------GUGCAAGGAGUUGGGGGGCAAGACAACCUGGA--ACGAGGGAAGCCGACGGAGAU--------UCU-------GUCUCCCAGGGCCAAUCUCGUGGCGAGCUCUA----------GCGA---------UGGAGCCGUCGUAACGCGCGGCAAGGUGUCGGCUCUGUCCCUUU---------UUUGGGACCGGGCUUAAGGAACGUGCUAGU-CCCCUGG---ACCAA-CCAGGCCAGUUGCUGG-AGUG-CUUGCAC-CACUAAGGCAGCUGG-AAGCGUUUGAGAUCGUGGAGGAAAUG-CCUCGAUCGAUGCUU-GG-----------------------------------------------------------------UAUCUCG--ggagccugcg-
                    ....<<<<<<--<<-------------....[[^>>>>>>>-...<<<<<<<...---------------------------...>>>>>>>.<<<<.<<<<<<<<---------------------------....----------------------------------->>>>.......>>>>>>>>..<<<<.<<<...--<<<<<<...<<<...<<<<<<--------...------->>>>>>...>>>...>>>>>><<<<.<<<<<<----------....--------->>>>>>>>>>...[.[[[[[...>>>>>>><<<<<.<<<<<...---------...>>>>>.>>>>>.......]]]]]]<<.-..<<<<<---.....->>>>><<<<<<<<<..-<<<<-.......->>>>..>>>>>>>>>-<<<<<<<...<<<<<.<<........->>.>>>>>>>>>>>>-..-----------------------------------------------------------------...>>..--]]].......-
Chlo_sp-2.S943      caccaggcgu--UA-------------ACUAUCUGGCGCCU-AAGAGUCGGCUAC---------------------------UGUGUCGGCUAGUCCACCCAGCAC---------------------------CAAA-----------------------------------GUGCAAGGAGUUGGGGGGCAAGACAACCUGGA--ACGAGGGAAGCCGACGGAGAU--------UCU-------GUCUCCCAGGGCCAAUCUCGUGGCGAGCUCUA----------GCGA---------UGGAGCCGUCGUAACGCGCGGCAAGGUGUCGGCUCUGUCCCUUU---------UUUGGGACCGGGCUUAAGGAACGUGCUAGU-CCCCUGG---ACCAA-CCAGGCCAGUUGCUGG-AGUG-CUUGCAC-CACUAAGGCAGCUGG-AAGCGUUUGAGAUCGUGGAGGAAAUG-CCUCGAUCGAUGCUU-GG-----------------------------------------------------------------UAUCUCG--ggagccugcg-
                    ....<<<<<<--<<-------------....[[^>>>>>>>-...<<<<<<<...---------------------------...>>>>>>>.<<<<.<<<<<<<<---------------------------....----------------------------------->>>>.......>>>>>>>>..<<<<.<<<...--<<<<<<...<<<...<<<<<<--------...------->>>>>>...>>>...>>>>>><<<<.<<<<<<----------....--------->>>>>>>>>>...[.[[[[[...>>>>>>><<<<<.<<<<<...---------...>>>>>.>>>>>.......]]]]]]<<.-..<<<<<---.....->>>>><<<<<<<<<..-<<<<-.......->>>>..>>>>>>>>>-<<<<<<<...<<<<<.<<........->>.>>>>>>>>>>>>-..-----------------------------------------------------------------...>>..--]]].......-
Chlo_sp-1.S943      caccaggcgu--UA-------------ACUAUCUGGCGCCU-AAGAGUCGGCUAC---------------------------UGUGUCGGCUAGUCCACCCAGCAC---------------------------CAAA-----------------------------------GUGCAAGGAGUUGGGGGGCAAGACAACCUGGA--ACGAGGGAAGCCGACGGAGAU--------UCU-------GUCUCCCAGGGCCAAUCUCGUGGCGAGCUCUA----------GCGA---------UGGAGCCGUCGUAACGCGCGGCAAGGUGUCGGCUCUGUCCCUUU---------UUUGGGACCGGGCUUAAGGAACGUGCUAGU-CCCCUGG---ACCAA-CCAGGCCAGUUGCUGG-AGUG-CUUGCAC-CACUAAGGCAGCUGG-AAGCGUUUGAGAUCGUGGAGGAAAUG-CCUCGAUCGAUGCUU-GG-----------------------------------------------------------------UAUCUCG--ggagccugcg-
                    ....<<<<<<--<<-------------....[[^>>>>>>>-...<<<<<<<...---------------------------...>>>>>>>.<<<<.<<<<<<<<---------------------------....----------------------------------->>>>.......>>>>>>>>..<<<<.<<<...--<<<<<<...<<<...<<<<<<--------...------->>>>>>...>>>...>>>>>><<<<.<<<<<<----------....--------->>>>>>>>>>...[.[[[[[...>>>>>>><<<<<.<<<<<...---------...>>>>>.>>>>>.......]]]]]]<<.-..<<<<<---.....->>>>><<<<<<<<<..-<<<<-.......->>>>..>>>>>>>>>-<<<<<<<...<<<<<.<<........->>.>>>>>>>>>>>>-..-----------------------------------------------------------------...>>..--]]].......-
Skn.S956            ucgcaaggcu--GAAU--------------AGCUAGGCCGCG-AUAGUUGGGUGUCGUCCU---UUUU----GGGACGGCAUUAUGCCAGCUAGUUGACCGUUCAUAUUUUG---------------------UUUU---------------------------------UGGGGUGAGGUGAACGGCAGCGAGACAACCUGGA--ACGGGGAAAGCUAAAGUCAUGGGUGCUC-CCGCGAGCAUCCCUGACCAUGCCAAUCCCGUGGCGAGCCGUCAAGUG-----GCGA-CACUUGGCAAUGGCCGUCGUAACGCGCGGUAAGGUGUCGGGUGGCUCU-------UUCG------AGAGUCGCCUUAAGGUACGUGCUACU-CCCUCGC---GAAA--GCGAGCCGAAGACUGG-AGCU-CUCACCC-AGCAAAGGUCUCCGG-GGCUGUUUGAUACCAGUGAGGAAAUG-CUCUGGUAGAAGCCG-GU-----------------------------------------------------------------AAAAAGG--uaauuugacu
                    ......<<<<--....--------------[[.[[>>>>...-..<<<<<<<<<<<<<<<<---....---->>>>>>>>>>....>>>>>>.<<<<.<<<<<<<<<<<<<<---------------------....--------------------------------->>>>>>...>>>>>>>>>>>>..<<<<.<<<...--<<<<<<...<<....<<<<.<<<<<<<<-....>>>>>>>>.>>>>...>>...>>>>>><<<<.<<<<<<<<<<<-----....->>>>>>>>...>>>>>>>...[.[[[[[...>>>>>>><<<<<<<<<<-------....------>>>>>>>>>>.......]]]]]]<<.-..<<<<<---....-->>>>><<<<<<<<<..-<<<<-.......->>>>..>>>>>>>>>-<<<<<<<...<<<<<.<<........->>.>>>>>>>>>>>>-..-----------------------------------------------------------------...>>..--]].]].....
Dir.S956-1          accugcggcu--UAAUUGC--------------UAGGCCGCG--AUAGUCAGC----------(1099)----------------GCUGGCUAGUUGACUUCUC-----------------------ACAGAGGUUGAGA-----------------------------------------GAGAAGCAGCAAGACAACCUGGU--ACGGGGGAAUCUGAGGCCAACGAUC----AAUAG---GAUCUAUACUCAGACAAUCCCGUGGUGAGCUACUAGUGG-----GUAA---CUGCUAGAUAGCCGCUGUAACGCGCGCAAAGGUGUCGGGUAGCCUUAG----AAUCG----CUAAGGUUAUCUUAAGGGACGUGCUACU-CCCCCC----GCGA---GGGUGUCUGAAAGUA-AGGU-CUCAACC-ACCCCAGAUUCAGA--AGCUAAUGAUCUUGGGACACGCUACAAAUGCCCAAGGGAGGCUGG----------------------------------------------------------------UAUAAAGG--uaauuugacu-
                    ...<<<<<<<--<<.....--------------^^>>>>>>>--.<<<<<<<<----------~~~~~~---------------->>>>>>>><<<<.<<<<<<-----------------------.............----------------------------------------->>>>>>>>>>..<<<<.<<<...--<<<<<<...<<<<<<......<<<<----.....--->>>>....>>>>>>...>>>>>><<<<.<<<<<<<<<<<-----....--->>>>>>>.>>>>>>>>...[.[[[[[...>>>>>>><<<<<<<<<<<<----.....---->>>>>>>>>>>>.......]]]]]].<<-...<<<----....--->>>..<<<<<<....-.<<<-.......->>>.....>>>>>>--<<<<.....<<<<<<<.<<.........>>>>>>>>>..>>>>..----------------------------------------------------------------.....>>.--]]........-
Thi.S989            cucaccaggu--UAACGAA(09)--CAAGGUCUGGGCCUGG-AACAGCGAGAUG----------------------------AG-UUCGCU-AGUGCUGCAA-UUAA-CUCAUGUGGGG-AAG--UCCCUUAUUUCGGGCAUGAG-AGGCCUCU------UAG--------AGAGUAACCUUUUGCAGUGCGACACCAGCUGGU--ACAGGGGACGCCUCCUCUGAGAAGAGAGC-CUUGCGAGCUCUCAGAGAGGCCAACUCUGUGGCGAGUUCAA---------GUAGCG--------UUGAACCGUCGCAACGCACGCUAAGCGGUGGGUCACCUGUGAGA---------UAUCUUGGGUGGCUUAAGGUACGUGCUAAU-CCCAUGG---GAAA--CCAUGCCUCUAU-GAUUAAGC-CCGAAU--GCUGAAGCUUAGAGGAUCUGC---------------GGAA------------GCAGAU------GGUUUGAA--------------------AUCU---------------------UUCAAAU----AGUGG--ccagacacaa-
                    ....<<<<<<--<......~~~~--....[[[[[^>>>>>>-...<<<<<<...----------------------------..->>>>>>-.<<<<<<<<<-....-<<<<<<<<<<<-...-->>>>.........>>>>>>>-<<<.<<<<------...-------->>>>...>>>.>>>>>>>>>..<<<<.<<<...--<<<<<<...<<<<.<<<<<<<.<<...<<-...>>...>>>>>>>>>>>>>...>>>>>><<<<.<<<<<<---------......-------->>>>>>>>>>...[.[[[[[...>>>>>>><<<<<<<<..<<..---------..>>..>>>>>>>>.......]]]]]].<<-..<<<<<---....-->>>>><<<<<<.-.....<<<-......-->>>......>>>>>><<<<<<---------------....------------>>>>>>------.<<<<<<<--------------------....--------------------->>>>>>>----.>>..--]]]]]]....-
Tve.S989            cucaccaggu--UAACGUA------CAUCGUCUGGGCCUGG-AAAAGUAAUCGU----------------------------AGUAUUGCU-AGUACAGAGAUCGCACAUCCGCGUGGGGGAGC-CCCCUAUUU-CGGGCGCGGA-GCGGCC------ACUAAACC---------GGUCGUGAUCUCGUGCAACACCAGCUGGU--ACAGGGAACGCCUACCUGGCGCUCGCACCUCCCGGUGCGGGCGUCCGGGGCCGAUCCUGUGGCGAGCUCAG---------GUAGCG--------CUGAGCCGUCGCAACGCACGCUAAGCGGUGGGCUCGCAGGGCAU--------UCGUCCCGGCGGGCUUAAGGUACGUGCUAAU-CCCGCGG---GGAA--CCGCGGCCUCUCUGACUAGGU-CCGAAA--GCCGAAGCAGAGGGGGCGAGGGGUGCUGUCC-----UUCC---GGGCGGCCUCCUCGC---------------------------------------------------------------GUAGGCAAUAUG--ccagacacaa-
                    ....<<<<<<--<......------....[[[[[^>>>>>>-...<<<<<<...----------------------------...>>>>>>-.<<<<.<<<<<<......<<<<<<<<<<<...->>>>>....-...>>>>>>.-<<<<<<------........--------->>>>>>>>>>>>>>>>..<<<<.<<<...--<<<<<<...<<<..<<.<<<<<<<<<<<<....>>>>>>>>>>>>>.>>>>...>>>>>><<<<.<<<<<<---------......-------->>>>>>>>>>...[.[[[[[...>>>>>>><<<<<<<.<<<<..--------..>>>>..>>>>>>>.......]]]]]].<<-.<<<<<<---....-->>>>>><<<<<<<<.<<.<<<-......-->>>..>>>>>>>>>><<<<<<<<.<<<<<<<-----....--->>>>>>>>>>>>>>>---------------------------------------------------------------.........>>.--]]]]]]....-
Vfu.S1199           aauaacaggu--UAACA-------------CACAGGCUUGU-AACAGUGGUCCUCAUU----------------------AAAAUAUCCGCUAGUCGAGCGCAUUCAUCUCUGUUGGGA-AAGC-UCCCUAUUAUUGGGCAGAGA-GGACGGC-------UUCC---------GCUGUCUUUUGCGCCGGCGACACUACCUGGU--ACAGGGGACGCCC----------------GAAA--------------GGGCCAAUCCUGUGGCGAGCUCGG---------GUCGCG--------CCGAGCCGUCGCAACGCACGCUAAGGAGUGGGCCAGGA---------------------AACUGGCUUAAGGUACGUGCUAAU-CCCACGG---GUAA--CCGUGCUCGAUCGAA-UAGGCCCAAUAA--GCCGAAGCGUUCGGGGCUCUUGGG------------UAAU-------UCCGGAGUGGUCUGCUGCUUGCGGGGACGGACGGGGGCUC------UCC-GAGCCUCUUGAACUCCCCGGCAGGCGGCGG-AAAUG--cugugaugcc-
                    ....<<<<<<--<....-------------[[[[^>>>>>>-...<<<<<<.......----------------------......>>>>>>.<<<<.<<<<<.....<<<<<<<<<<<-....->>>>........>>>>>>>.-<<<<<<<-------....--------->>>>>>>..>>>>>>>>>..<<<<.<<<...--<<<<<<...<<<<----------------....-------------->>>>...>>>>>><<<<.<<<<<<---------......-------->>>>>>>>>>...[.[[[[[...>>>>>>><<<<<<..---------------------..>>>>>>.......]]]]]].<<-..<<<<<---....-->>>>><<<<<.<<..-..<<<.......-->>>....>>.>>>>>.<<<<.<<<------------....------->>>>>>>....<<<<<<<<<<<<<<<<.....<<<<<<<<------...->>>>>>>>.....>>>>>.>>>>>>>>>>>-..>>.--]]]]].....-
Ksp.S1199           aauaacaggu--UAACCGU(29)--GCAUCAACAGGCCUGU-AAAAGCGGGUCUCAAACUUCUUACUG---GUCAAAAAAAUAAUAUCCGCUAGUCUACAUGCAUUUUACUUUUGUGGAAGAGGUCUUCCAAUAUCAGACAAAAGGGCAUUAAG------AAUU--------CUUAAUGCUAGCAUGAGGCAAGACCACCUGGU--ACAGGGGACGCCUAUUA-----------AAUUAC---------UAAUAGGUCAAUCCUGUGGCGAGUUCAAGU---------AAC--------GCUGAACCGUCGCAACGCGCGGAAAGGGGUCGGUUUACUUAUA--------------AAGAGUAAGCUUAAGGUACGUGCUAAU-CCCACGA---GUAA--UCGUGCUUCUAUGUCA-AGG-ACUGAUAU-GCCAAACCAUAGAAGGGUUUUU-------------UUAAUU----------AAAAACU-GGUCUUUUAAAAAAAAAAAAUA------------GUG------------UAUUUUAUAAAUUAAAA----AAUG--cugugaugcc-
                    ....<<<<<<--<......~~~~--......[[[^>>>>>>-...<<<<<<<................---..............>>>>>>>.<<<<.<<<<<......<<<<<<<<<<<<....>>>>>........>>>>>>><<<<<<<<<------....-------->>>>>>>>>.>>>>>>>>>..<<<<.<<<...--<<<<<<...<<<<<<<<-----------......--------->>>>>>>>...>>>>>><<<<.<<<<<.<<---------...-------->>>>>>>>>>>...[.[[[[[...>>>>>>><<<<<<<<<...--------------..>>>>>>>>>.......]]]]]].<<-..<<<<<---....-->>>>><<<<<<<<...-.<<-........-.>>....>>>>>>>><<<<<<<-------------......---------->>>>>>>-....<<<<<<......<<<<<<------------...------------>>>>>>.....>>>>>>----.>>.--]]]]......-
Lin.S1199-1         ----acaggu--UAACC-----------UACACAGGCCUGU-AACAGUGAGCCUCGGU---------------------AAAGAUAAUCGCUAGUCCAGCGUCUUGA-CCUUCCCGGGG-AAGU-CCCCAACUGUCGGGGGAAGGCAAGCCCA-------GCCA---------UGGGCUUGUGACGCGGGCAACAUCACCUGGU--ACAGGGGACGCCGGAUCUGC------UAGUGCGUGU-----GCAGAUUGGCCGAUCCUGUGGCGAGCCAAA---------GUAACG--------UUUGGCCGUCGCAACGCGCGGAAAGGGAUGGGCUGGCUU-------------------CGGCUGGCUUAAGGUACGUGCUACUC-CCUCGG---GUAA--CCGAGCUCCAACGAUG-AGGCC-CGACA-GGCCAAGGCGUUGGGGGACAGCC--------------UGC------------GGCUGUU-GGUAUCAUUCCG----------------------GUG----------------------CGGAAUG-UUUGAUG--cugugaugcc-
                    ----<<<<<<--<....-----------..[[[[^>>>>>>-...<<<<<...<<...---------------------...>>...>>>>>.<<<<.<<<<<....-<<<<<<<<<<<-....->>>>.........>>>>>>><<<<<<<<-------....--------->>>>>>>>.>>>>>>>>>..<<<<.<<<...--<<<<<<...<<<<.<<<<<<------..........----->>>>>>>>>>...>>>>>><<<<.<<<<<<---------......-------->>>>>>>>>>...[.[[[[[...>>>>>>><<<<<<<..-------------------..>>>>>>>.......]]]]]]..<<-.<<<<<---....-->>>>><<<<<<<<...-.<<<<-.....->>>>....>>>>>>>><<<<<<<--------------...------------>>>>>>>-.....<<<<<<<----------------------...---------------------->>>>>>>-...>>..--]]]]].....-
Lin.S1199-2         ----acaggu--UAACC-----------UACACAGGCCUGU-AACAGUGAGCCUCGGU---------------------AAAGAUAAUCGCUAGUCCAGCGUCUUGA-CCUUCCCGGGG-AAGU-CCCCAACUGUCGGGGGAAGGCAAGCCCA-------GCCA---------UGGGCUUGUGACGCGGGCAACAUCACCUGGU--ACAGGGGACGCCGGAUCUGC------UAGUGCGUGU-----GCAGAUUGGCCGAUCCUGUGGCGAGCCAAA---------GUAACG--------UUUGGCCGUCGCAACGCGCGGAAAGGGAUGGGCUGGCUU-------------------CGGCUGGCUUAAGGUACGUGCUACUC-CCUCGG---GUAA--CCGAGCUCCAACGAUG-AGGCC-CGACA-GGCCAAGGCGUUGGGGGACAGCC--------------UGC------------GGCUGUU-GGUAUCAUUCCG----------------------GUG----------------------CGGAAUG-UUUGAUG--cugugaugcc-
                    ----<<<<<<--<....-----------..[[[[^>>>>>>-...<<<<<...<<...---------------------...>>...>>>>>.<<<<.<<<<<....-<<<<<<<<<<<-....->>>>.........>>>>>>><<<<<<<<-------....--------->>>>>>>>.>>>>>>>>>..<<<<.<<<...--<<<<<<...<<<<.<<<<<<------..........----->>>>>>>>>>...>>>>>><<<<.<<<<<<---------......-------->>>>>>>>>>...[.[[[[[...>>>>>>><<<<<<<..-------------------..>>>>>>>.......]]]]]]..<<-.<<<<<---....-->>>>><<<<<<<<...-.<<<<-.....->>>>....>>>>>>>><<<<<<<--------------...------------>>>>>>>-.....<<<<<<<----------------------...---------------------->>>>>>>-...>>..--]]]]].....-
Lin.S1199-3         ----acaggu--UAACC-----------UACACAGGCCUGU-AACAGUGAGCCUCGGU---------------------AAAGAUAAUCGCUAGUCCAGCGUCUUGA-CCUUCCCGGGG-AAGU-CCCCAACUGUCGGGGGAAGGCAAGCCCA-------GCCA---------UGGGCUUGUGACGCGGGCAACAUCACCUGGU--ACAGGGGACGCCGGAUCUGC------UAGUGCGUGU-----GCAGAUUGGCCGAUCCUGUGGCGAGCCAAA---------GUAACG--------UUUGGCCGUCGCAACGCGCGGAAAGGGAUGGGCUGGCUU-------------------CGGCUGGCUUAAGGUACGUGCUACUC-CCUCGG---GUAA--CCGAGCUCCAACGAUG-AGGCC-CGACA-GGCCAAGGCGUUGGGGGACAGCC--------------UGC------------GGCUGUU-GGUAUCAUUCCG----------------------GUG----------------------CGGAAUG-UUUGAUG--cugugaugcc-
                    ----<<<<<<--<....-----------..[[[[^>>>>>>-...<<<<<...<<...---------------------...>>...>>>>>.<<<<.<<<<<....-<<<<<<<<<<<-....->>>>.........>>>>>>><<<<<<<<-------....--------->>>>>>>>.>>>>>>>>>..<<<<.<<<...--<<<<<<...<<<<.<<<<<<------..........----->>>>>>>>>>...>>>>>><<<<.<<<<<<---------......-------->>>>>>>>>>...[.[[[[[...>>>>>>><<<<<<<..-------------------..>>>>>>>.......]]]]]]..<<-.<<<<<---....-->>>>><<<<<<<<...-.<<<<-.....->>>>....>>>>>>>><<<<<<<--------------...------------>>>>>>>-.....<<<<<<<----------------------...---------------------->>>>>>>-...>>..--]]]]].....-
Str.S1199           aauaacaggu--UAACC----------AUUCAUAGGCCUGU-AACUGGAAA-----------------------------------AAUCCAAGUUUCUAUC-UU-UGCAAUCACGGGC-UAGU-GUCCGAGUAUAAGGUGAUUGACA--------UUUACAUGUU----------------GAUAGAAGCAAGACAACCUGGA--UCAGGGAAAGCUAAGGGCU----------UAGC---------AGCCUAUGCCAAUCCUGAGGCGAGCUUGA---------GUAACG--------UCAAGCCGCUGCAACGCGCGCUAAGGUGUCGAUUCAGUAU-----------------AUUCUGAAUUUAAGGUACGUGCUAAU-CUCACUC---GAAA--GAGUGCUGAUGAGAAU-AGGUC-UUAUA-CGCCGAAGCUUGUCAGUCAUUACU------------UGAAC-----------AGUAAUGAAGUAUUGUGUUUUUUUGGUG--------------GAU-----------------CACCGAAAAACACUAAAUUG--cugugaugcc-
                    ....<<<<<<--<....----------..[[[[[^>>>>>>-...<<<<..-----------------------------------..>>>>.<<<<<<<<<-..-<<<<<<<<<<<<<-....->>>>.........>>>>>>>.>>--------..........---------------->>>>>>>>>..<<<<.<<<...--<<<<<<...<<...<<<<<----------....--------->>>>>..>>...>>>>>><<<<.<<<<<<---------......-------->>>>>>>>>>...[.[[[[[...>>>>>>><<<<<<<...-----------------...>>>>>>>.......]]]]]]<<<-..<<<<<---....-->>>>><<<<<<<<...-.<<<.-.....-.>>>....>>>>>>>>.<<<<<<<------------.....----------->>>>>>>.......<<<<<<<<<.<<<<--------------...----------------->>>>>>>>>>>>>...>>>.--]]]]]]....-
Tin.S1199-2         aauaacaggu--UGAC-----------CAUUACAGGCCUGU-AACAGUGGGCCUCAUU---------------------AAAGAUUACUGCUAGUCCAGCGACUUUA-CCUCCGCGGGG-AAGC-CCCC-AUUAUCGGGCGGAGG-GGGCCCU------GAGAA---------AGGGCCC-UGUCGCGGGCGACACCACCUGGA--ACAGGGAACGCCUGAACCCU---------UCAUU-------GGGGGACGGCCGAUCCUGUGGCGAGCCUGG--------GARUUGCG-------CCAGGCCGUUGCAACGCGCGCAAAGGGGUGGGCCUCCAC--------------------UGGAGGCUUAAGGUACGUGCUAAU-UCCGUGG---GAAA--CCACGCCCCCGUAACU-AGGCC-CGAUA-AGCCGAAGUGCGGGGGGGCUACGGGCGC---------CACG------GCGCCUGUAGCUGGGGCUUUUACAACAAGGGGGUGAUUUCAG-----UUCACUGAAGUCACCGCCGAGUAUAUUGUAAAGCCAUCUG--cugugaugcc-
                    ....<<<<<<--<...-----------[[[[[[[^>>>>>>-...<<<<<...<<...---------------------...>>...>>>>>.<<<<.<<<<<....-<<<<<<<<<<<-....->>>>-........>>>>>>>-<<<<<<<------.....--------->>>>>>>-.>>>>>>>>>..<<<<.<<<...--<<<<<<..<<.<<<..<<<<---------.....------->>>>..>>>.>>.>>>>>><<<<.<<<<<<--------........------->>>>>>>>>>...[.[[[[[...>>>>>>><<<<<<<..--------------------.>>>>>>>.......]]]]]].<.-..<<<<<---....-->>>>><<<<<<<<.<<-.<<<.-.....-.>>>..>>>>>>>>>><<<<<<<<<<<<---------....------>>>>>>>>>>>>..<<<<<<.<<<<<..<<.<<<<<<<<<<<-----....>>>>>>>>>>>.>>..>>....>>>>>>>>>...>.--]]]]]]]]..-
Gpr.S1199           aauaacaggu--UAACC-----------UACACAGGCCUGU----AACAGUGGGCCUCUCU------------------AAAGAUAACUGUUAGUCCAACGUCUUUGU-CUCCUUGAGGAAAUGCCCUCAACUAUCGGGAGGAGA-AGCGAGACAC----UGA--------GUGUCUUGCUUGACGUGGGCAACACUACCUGGU--ACAGGGAACGCCGGAUCAGCGG-----GUGACAAA----CCGCUGGUUGGCCGAUCCUGUGGCGAGCCUGA---------GUAGCG--------UCAGGCCGUCGCAACGCGCGGAAAGGAGUGGGCUGUCUGUUCU-------------GAACAACAGCUUAAGGUACGUGCUAAUACCCUUGG---GUUAA-CCAAGCUAAACAUAAUAAGGUC-CGAUA-GACCAAGGUAUGGGGGGGUUCAGAGCC----------ACU--------GGCUUUUGGACUGGUCGAUGUGGUUUGGGC----------------UGUC----------------GCCAACCGCAAUCG-AAAUG--cugugaugcc-
                    ....<<<<<<--<....-----------..[[[[^>>>>>>----<<<<<<..<<......------------------...>>..>>>>>>.<<<<.<<<<<.....-<<<<<<<<<<......>>>>>.........>>>>>.-<<<<<<<<<<----...-------->>>>>>>>>>.>>>>>>>>>..<<<<.<<<...--<<<<<<...<<<<.<<<<<<<<-----........---->>>>>>>>>>>>...>>>>>><<<<.<<<<<<---------......-------->>>>>>>>>>...[.[[[[[...>>>>>>><<<<<<.<<<<..-------------.>>>>>>>>>>.......]]]]]].<<...<<<<<---.....->>>>><<...<<<<....<<<<-.....->>>>....>>>>...>><<<<<<<<<<----------...-------->>>.>>>>>>>....<<<<<<<<<<..<<<----------------....---------------->>>>>>>>>.>>>>-..>>.--]]]]].....-
Sdi.S1199-1         ---aacaggu--UGACG-----------ACAACAGGCCUGU-GACAGCGGGGCUUCGAACUUUCCG-------UGUUUUUUUUUCUUCCGCUAGUCGAUCAUCCGU--GACGGCCGGGC-AAGC-GCCCGAGUACCAGGACCGUCGGGCCCCC-----GAGAAGG--------GGGGGCCUAGGAUGCGGCAAGACGACCCGGU--UCGGGGAACGCCAGC--------------GUGC------------GCUGGCCGAUCCCGAGGCGAGGUGCC---------GUAGCG--------GGCACCCGUCGUAACGCGCGGUAGGGCGUCGGUCCCCCCUCCCAC-------GGCGGAGGGGAGGCUUAAGGUACGUGCUAAA--CCCCCA---GCGA--UGGGGCCUGUAGGAAA-AGCCC-UGGUA-CGGCGAAGCCUACGGGGACCGCC--------------CGAU------------GGCGGUCG---GAUGCCGGCGGGC----------------CACGGA----------------GCCCCCGGCGUC--GAUUG--cuguua-----
                    ---.<<<<<<--<....-----------..[[[[^>>>>>>-...<<<<<<<..............-------............>>>>>>>.<<<<..<<<<<..--<<<<<<<<<<<-....->>>>........>>.>>>>>.<<<<<<<-----.......-------->>>>>>>..>>>>>>>>>..<<<<.<<<...--<<<<<<...<<<<<<--------------....------------>>>>>>...>>>>>><<<<.<<<<<<---------......-------->>>>>>>>>>...[.[[[[[...>>>>>>><<<<.<<<<<<<...-------...>>>>>>>.>>>>.......]]]]]].<<--.<<<<<---....-->>>>><<<<<<<<...-.<<<.-.....-.>>>....>>>>>>>><<<<<<<--------------....------------>>>>>>>.---<<<<<<<<.<<<<----------------......---------------->>>>>>>>>>>>--..>>.--]]]]].-----
Xsp-2.S1199         aauaacaggu--UGAAU------------UCACAGGCCUGU-AAUAGUAAGCCUCGUU----------------------AAAUAUUUUACUAGUCUAGUACCUUUAUUUCUUUUGGGG-AAGC-CCCCUUUUAUCGGGAAGAGACGCAGGGC-------AAAC---------GCUCUGCUUGGUACGGGCGACACUACCUGGU--ACAGGGAACGCCUCUAGGUGC--------UUAG-------GCGCCUAAGGCCGAUCCUGUGGCGAGUCCGG---------AUAGCG--------CCGGGCCGUCGCAACGCGCGGAAAGGAGUGGGUCGGACUGCUG-----------AUAANUCUGGCCUUAAGGUACGUGCUAAC-CCCUCGG---GAAA--CCGAGCCUCUGCAAUU-AGACC-CGAUA-AGUCGAAGUGUAGGGGGGCCU------------CCGANAGAUC------------AGGCCU---GGU--------------------------NUNUUA-------------------------ACC-----UG--cugugaugcc-
                    ....<<<<<<--<....------------[[[[[^>>>>>>-...<<<<<<.......----------------------......>>>>>>.<<<<.<<<<<....<<<<<<<<<<<<-....->>>>........>>>>>>>>.<<<<<<<-------....--------->>>>>>>..>>>>>>>>>..<<<<.<<<...--<<<<<<...<<<<.<<<<<<<--------....------->>>>>>>>>>>...>>>>>><<<<.<<<<<<---------......-------->>>>>>>>>>...[.[[[[[...>>>>>>><<<<<<<......-----------.....>>>>>>>........]]]]]].<.-..<<<<<---....-->>>>><<<<<<<<...-.<<<.-.....-.>>>....>>>>>>>><<<<<------------..........------------>>>>>.---<<<--------------------------......------------------------->>>----->.--]]]]]]....-
Xsp-3.S1199         aauaacaggu--UGAAU------------UCACAGGCCUGU-AAUAGUAAGCCUCGUU----------------------AAAUAUUUUACUAGUCCAGUACCUUUAUCUCUUUUGGGG-AAGC-CCCCUUUUAUCGGGAAGAGACGCAGGGC-------AGAC---------GCUCUGCUUGGUACGGGCGACACUACCUGGU--ACAGGGAACGCCUCUAGGUGC--------UUAG-------GCGCCUAAGGCCGAUCCUGUGGCGAGUCCGG---------AUAGCG--------CCGGGCCGUCGCAACGCGCGGAAAGGAGUGGGUCGGACUGCU------------GAUAGGUCUGGCUUAAGGUACGUGCUAACC-CCUCGG---GAAA--CCGAGCCUCUGCAAUU-AGACC-CGAUA-AGUCGAAGUGUUAGGGGGGCCUCGA------------GAGA------------UUAGGCUGG-------------------------------------------------------------UAUUUUAACUG--cugugaugcc-
                    ....<<<<<<--<....------------[[[[[^>>>>>>-...<<<<<<.......----------------------......>>>>>>.<<<<.<<<<<....<<<<<<<<<<<<-....->>>>........>>>>>>>>.<<<<<<<-------....--------->>>>>>>..>>>>>>>>>..<<<<.<<<...--<<<<<<...<<<<.<<<<<<<--------....------->>>>>>>>>>>...>>>>>><<<<.<<<<<<---------......-------->>>>>>>>>>...[.[[[[[...>>>>>>><<<<<<<.....------------.....>>>>>>>........]]]]]].<<<-.<<<<<---....-->>>>><<<<<<<<...-.<<<.-.....-.>>>....>>.>>>>>>.<<<<.<<------------....------------>>>>>>.>>-------------------------------------------------------------.........>.--]]]]]]....-
Cky.S1199           aauaacaggu--UGACC-----------UACACAGGCCUGU-AACAGUAGUCCUCGUU----------------------AAAAUAUCUGCUAGUCCAUGUAACG--UCUCUGUUGGGG-CAGU-CCCCUUCUAUCGGGCAGAGA-GGAUUC--------GAAA----------GAGUCCUAGUUACGGGCGACACCACCUGGU--ACAGGGAACGCCGACCCAGGCACAUCA--GCAA---UGAUGUACUGGAGGCCGAUCCUGUGGCGAGCUCGG---------GUCACG--------CCGAGCCGUCGCAACGUGCGGAAAGGGGUGGGCCAGCAUAA----------------CCUGCUGGCUUAAGGUACGUACUAAU-CCCAUGG---GAAA--CCAUGCCCGUGCAGCA-AGGCC-CGAUA-GGCUGAUCUGCACGGGGGCAGGCC-------------ACA-----------GGCCUGCC-GG--CGUCGCCCGC--------------------GUAU-----------------GCGGGUGGACGAACAAAUG--cugugaugcc-
                    ....<<<<<<--<....-----------..[[[[^>>>>>>-...<<<<<<.......----------------------......>>>>>>.<<<<..<<<<<.--<<<<<<<<<<<<-....->>>>........>>>>>>>>-<<<<<<--------....---------->>>>>>..>>>>>>>>>..<<<<.<<<...--<<<<<<...<<<...<<<<..<<<<<<--....--->>>>>>.>>>>.>>>...>>>>>><<<<.<<<<<<---------......-------->>>>>>>>>>...[.[[[[[...>>>>>>><<<<<<<<...----------------..>>>>>>>>.......]]]]]].<<-..<<<<<---....-->>>>><<<<<<<<<..-.<<<<-.....->>>>...>>>>>>>>><<<<<<<<-------------...----------->>>>>>>>-..--<<<<<<<<<<--------------------....----------------->>>>>>.>>>>.....>>.--]]]]].....-
Pgh.S1199           aaaaacaggu--UAACC-----------UACACAGGCCUGU-AACAGUG----------------GGAUUGACA--------------CGCUAGUCUAGUCACG---UCCUCCGUGGGG-AAGU-CCCCAUCUAACGGGCGGAGGAGGCUC---------GCGA-----------GAGCUCAGUGGCAGGCGACACCACCUGGA--ACAGGGAACGCCUAACCGGACGCGUCA--GUCU---UGACGCUUCGGCGGCCGAUCCUGUGGCGAGCUCGG---------GUAACG--------CCGAGCCGUCGCAACGUGCGCAAAGGGGUGGGCCGAC---------UCU-----------GUCGGCUUGAGGGACGUACUAUC--CUAUGG---GGAA--CCAUACUUGUGCAG--UGAANG-CCGUA-GACUAAGCUGUAUGGGGGCUGACCGAC---------GCUGCA------GUCAGUCAGCC--------------------------------------------------------------(189)GGCCAGUA-------------
                    ....<<<<<<--<....-----------......>>>>>>>-...<<<<----------------.........-------------->>>>.<<<<.<<<<<.---.<<<<<<<<<<<-....->>>>.........>>>>>>>.<<<<<---------....----------->>>>>..>>>>>>>>>..<<<<.<<<...--<<<<<<...<<<...<<<<<.<<<<<<--....--->>>>>>>>>>>.>>>...>>>>>><<<<.<<<<<<---------......-------->>>>>>>>>>...[.[[[[[...>>>>>>><<<<<<<---------...----------->>>>>>>.......]]]]]]...--.<<<<<---....-->>>>><<<<<<<<<--......-.....-.......>>>>>>>>><<<<<<<.<<<---------......------>>>.>>>>>>>--------------------------------------------------------------~~~~~........-------------
Pte.S1199-2         aauaacaggu--UAACC-----------UACACAGGCCUGU-AACAGUGGGCCUCGUU----------------------AAA-CAACCGCUAGUCUAUGCAACG-UCUCUGUUGGGGG--AGU-CCCCUUUUAUCGGGCAGAGA-GGACC---------GGA------------GGUCCUAGUUGCGGGCAACACCACCUGGU--ACAGGGGACGCCUAGCCGGACGGUCG---GAAA---CGACGUCCUGGCGGCCAAUCCUGUGGCGAGCUCGG---------GUCACG--------CCGAGCCGUCGCAACGUGCGGAAAGGGGUGGGCCAGCAUUA----------------CCUGCUGGCUUGAGGUACGUACUAAUC-CCAUGG---GGAA--CCAUGCUCAUACAGGA-AGGCC-CGAUA-GGCUGAUCUGUAUGGGGGCCGGCCGAC---------ACCAC-------GUCGGCCUGCCGG---CGUCGGCUCGCAGCUGCC-----------UGCCAC--------GGCACCUGCGCCGCCGACG---AGAUG--cugugaugcc-
                    ....<<<<<<--<....-----------..[[[[^>>>>>>-...<<<<<........----------------------...-...>>>>>.<<<<..<<<<<.-<<<<<<<<<<<<<--...->>>>>.......>>>>>>>>-<<<<<---------...------------>>>>>..>>>>>>>>>..<<<<.<<<...--<<<<<<...<<<..<<<<<<<<.<<<---....--->>>>>>>>.>>>>>>...>>>>>><<<<.<<<<<<---------......-------->>>>>>>>>>...[.[[[[[...>>>>>>><<<<<<<<...----------------..>>>>>>>>.......]]]]]].<<<-.<<<<<---....-->>>>><<<<<<<<<<.-.<<<<-.....->>>>..>>>>>>>>>><<<.<<<<<<<---------.....------->>>>>>>.>>>..---<<<<<<<.<<<<<.<<<<-----------......-------->>>>.>>>>>..>>>>>>>---.>>>.--]]]]].....-
Mto.S1199           aauaacaggu--UGACU-------------UACAGGCCUGU-AACAGUGGACCUCACU----------------------AAAUAUUCCGCUAGUUCAGCAUCGAA--UCUCCCCGGGG--AUGCCCCC-AUUAUCGGGAUGGAGACACGCAGC------UCA----------GCUGCGCGAGAUGCGGGCAACACCACCUGGU--ACAGGGGACGCCGACGCCGCUUGGUC---UCUG---GAUUCAGCGGCAGGCCAAUCCUGUGGCGAGCUCAG---------GUAGCA--------CUGAGCCGUCGCAACGCGCGCAAAGGGGUGGGCCAGACA--------------------UUCUGGCUUAAGGUACGUGCUAGC--CCUUGG---GAAA--CCAAGCUCCCGUGUUC-AGAGC-CGAUA-ACUCGAAGCACGGGAGGGUCGAAC-------------GCU-----------GUUCGGCUGGG---GUCACCAGUA-------------------GCA------------------UACUGGUGAC---GAUCUG--cugugaugcc-
                    ....<<<<<<--<....-------------[[[[^>>>>>>-...<<<<<<.......----------------------......>>>>>>.<<<<.<<<<<...--<<<<<<<<<<<--....>>>>-.......>>..>>>>>..<<<<<<------...---------->>>>>>...>>>>>>>>>..<<<<.<<<...--<<<<<<...<<<...<<<<<<.<<<<---....--->>>>.>>>>>>.>>>...>>>>>><<<<.<<<<<<---------......-------->>>>>>>>>>...[.[[[[[...>>>>>>><<<<<<<..--------------------.>>>>>>>.......]]]]]]<<.--.<<<<<---....-->>>>><<<<<<<<<<.-.<<<.-.....-.>>>..>>>>>>>>>>.<<<<<<<-------------...----------->>>>>>>....---<<<<<<<<<<-------------------...------------------>>>>>>>>>>---...>>.--]]]]].....-
Her.S1199           aauaacaggu--UAACC-----------UACACAGGCCUGU-AACAGUGGGCCUCAUU------------------AAAAAAGAUAACCGCUAGUCCAGCGACUUUACCUCCGUAGGGG-AAGCCCCCCUACUAUCGGGCGGAGG-GGGACUC-------GAA-----------GAGUCUCUGUCGCGGGCAACACCACCUGGU--ACAGGGAACGCC-----------------UACG---------------GGCCGAUCCUGUGGCGAGUCUGG---------GUCGCG--------CCAGACCGUCGCAACGCGCGCAAAGGGGUGGGCUGGCCUAC---------------ACUGGCCGGCUUAAGGUACGUGCUAAU-CCCAUGG---GACAA-CCAUGCCCGUCCACGG-AGGCC-CGAUA-GGCCAAAGUGUUCGGGGGCGCUAUGAG---------AUCAUA--------CUCGGCGCU-GGUAACUCUACGAUCCGGGAGGCGUGGCGGC---UCCC--GCUGCCGUGUCUUCUCGGGGGGGAGAGU--AAUG--cugugaugcc-
                    ....<<<<<<--<....-----------..[[[[^>>>>>>-...<<<<<...<<...------------------......>>...>>>>>.<<<<.<<<<<....<<<<<<<<<<<<-.....>>>>>........>>>>>>>-<<<<<<<-------...----------->>>>>>>.>>>>>>>>>..<<<<.<<<...--<<<<<<...<<<-----------------....--------------->>>...>>>>>><<<<.<<<<<<---------......-------->>>>>>>>>>...[.[[[[[...>>>>>>><<<<<<<<...---------------...>>>>>>>>.......]]]]]].<<-..<<<<<---.....->>>>><<<<..<<<..-.<<<<-.....->>>>...>>>..>>>><<<<<<..<<<---------......-------->>>>>>>>>-....<<<<<....<<<<<<<<<<<<<<<<<<---....-->>>>>>>>>>>.>>>>>>>....>>>>>--.>>.--]]]]].....-
Rbo.S1199           aauaacaggu--UAACCUC(34)AUA--AUCACAGGCCUGU-AGCAGCGGAGCCUCUC--------------------GACAUCAAUCCGCUAGUCUAUCACCUUUAUAUCCGUAGGGG--AAGCCCCCAUCUGUCGGGCGGAUA-GGUCGUCCCC----(21)--------GGGGCGGCCCGGGGUAGGCAACAUCACCUGGG--ACAGGGGACGCCUCG--------------UCGAU-----------CGAGGUCAACCCUGUGGCGAGCCCGA---------GUAGCG--------UCGGGCCGUCGCAACGCGCGCAAAGGGGUGGGCCACCUU--------------------UGGUGGCUUAAGGUACGUGCUAAU-CCCGCGG---GUAA--CCGCGCUCUAGCGAUC-GAGGCCCGGCA-GGUCUAGACUCUAGGGGGCAUCGUAUC--------ACCAAGGC------GGUACGAUGCG-----GGCGGGUGUGGCUC---------------GAC--------------GAGUCCACGCUCUCCGAAAUAUG--cugugaugcc-
                    ....<<<<<<--<......~~~~...--[[[[[[^>>>>>>-...<<<<<<.......--------------------........>>>>>>.<<<<<<<.<<....<<<<<<<.<<<<--....>>>>.........>>>>>>>-<<<<<.<<<<----~~~~-------->>>>>>>>>.>>>>>>>>>..<<<<.<<<...--<<<<<<...<<<<<<--------------.....----------->>>>>>...>>>>>><<<<.<<<<<<---------......-------->>>>>>>>>>...[.[[[[[...>>>>>>><<<<<<<..--------------------.>>>>>>>.......]]]]]].<<-..<<<<<---....-->>>>><<<<<<...<<-.<<<<<.....->>>>>.>>..>>>>>>.<<<<<<<<<<--------........------>>>>>>>>>>.-----<<.<<<<<<<<<<<---------------...-------------->>>.>>>>>>>>.>>.....>>.--]]]]]]]...-
Osp.S1199           aauaacaggu--UAACCUG(10)ACGC--UCACAGGCCUGU-AAAAGCGGGGCCUCUUUCUUC---------------AAAUCUAUCCCGCUAGUCCAAUGCUUCAUCUCUGUUGGGGAAGUCCCCUUCU---GUCGGGCGGAGA-GGGCAGGC------AGA----------GCCUGUCUAAGCAUGGGCAACACAACCUGGU--ACAGGGAACGCCGAAGCC--------AAUUUCGAAA------GGCUGGGGCCGAUCCUGUGGCGAGCCUUG---------GUAACG--------CAAGGCCGUCGCAACGCGCGGAAAGGUGUGGGUCAUCUUGC---------------AAAAGGUGGCUUAAGGUACGUGCUAAU-CCCUCGG---GCAAA-CCGAGCACUUGCAAUA-AGACC-CGACA-GGUCGAGGUGCAGGUGGGACUUGUAGCAAUUGGU---UUG--ACCAAAUGCACUCGUCUG-----GUCU-------------------------GUU--------------------------AGAUAUAAAUG--cugugaugcc-
                    ....<<<<<<--<......~~~~....--[[[[[^>>>>>>-...<<<<<<<...........---------------.......>>>>>>>.<<<<.<<<<<<..<<<<<<<<.<<<<<<....>>>>>---..>.>>>>>>>>-.<<<<<<<------...---------->>>>>>>.>>>>>>>>>>..<<<<.<<<...--<<<<<<...<<<..<<<<--------..........------>>>>..>>>...>>>>>><<<<.<<<<<<---------......-------->>>>>>>>>>...[.[[[[[...>>>>>>><<<<<<<<<..---------------..>>>>>>>>>.......]]]]]].<<-..<<<<<---.....->>>>><<<<<<<<...-.<<<<-.....->>>>....>>>>>>>><<<<..<<.<<<.<<<<<---...-->>>>>.>>>>>..>>>>.-----<<<<-------------------------...-------------------------->>>>....>>.--]]]]]]....-
Epr.S1199           ------------UAA----(14)------UCACAGGCCUGU-AACAGCGGGGUUC---------------------------GUACGCCGCUAGUCAAGUAACGCAUCUUCUCGGAGC--AAGU-GCUUCGCAACUGGGAGAAGAAGAGUCAVGUYCGGCGCACGCCCUGGACGGAGCUCUAGUUACUGGCGAGACAAUCUGGU--UCAGGAGACGCUUCUCAUGCCU------AGUUAA------GGGUGUGAUGCCAAUCCUGAGGCGAAGCUGGA--------GUUACG--------UCCAGCCGCUGCAACGCGCGCAAAGAUGUCGGUUCCGGCACCC---AUU-----GGGGUCAGGAGCUUAAGGUACGUGCUAAUUCCCCCGA---GAAA--UCGGUGCCCCUAGACUGAGAU-CCAGUUA-AUCAAGGUCUAGGGGGGCUUCUGUUUGAUGUCCUGUUGCACAGGGCGGAUGACAGGGGCUGAAGUGUGGUCUUUUUUGGUGGGAUUCAAGUAUCACGUACWUGAACGUCCACCACCAAGACCGCACCUAAAUG-------------
                    ------------...----~~~~------............-...<<<<<.<<..---------------------------..>>.>>>>>.<<<<.<<<<<....<<<<<<<<<<<--....->>>>>........>>>>>>.<<<<<<..<<<<<<<....>>>..>>>>.>>.>>>>.>>>>>>>>>..<<<<.<<<...--<<<<<<...<<...<<<<<<<<------......------>>>>>>>>.>>...>>>>>><<<<..<<<<<<--------......-------->>>>>>>>>>...[.[[[[[...>>>>>>><<<<<<<<<.<<<---...----->>>>>>.>>>>>>.......]]]]]].<<....<<<<---....-->>>>..<<<<<<<<<<..<<<-.......->>>..>>>>>>>>>>.<<<<<<<<<...<<<<<<<<...>>>>>>>>...>>>>>>>>>....<<<<<<<<<<...<<<<<<<.<<<<.<<<<...>>>>.>>>>..>>>>>>>..>>>>>>>>>>....>>.-------------
                          P1                     P10   P1'        P2                                        P2'  P2.1                                                                                         P2.1'  P3           P4      P5    P5a                        P5a'    P5'    P4'  P6                                     P6'       P7        P3' P8                               P8'          P7'  P9.0  P9             P9' P9.1                          P9.1'      P9.2                                P9.2'        P9.3                                           P9.3'           P9.0' P10'